Transposable element sequence fragments incorporated into coding and noncoding transcripts modulate the transcriptome of human pluripotent stem cells.
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| Title: | Transposable element sequence fragments incorporated into coding and noncoding transcripts modulate the transcriptome of human pluripotent stem cells. |
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| Authors: | Babarinde IA; Shenzhen Key Laboratory of Gene Regulation and Systems Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China.; Department of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China., Ma G; Shenzhen Key Laboratory of Gene Regulation and Systems Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China.; Department of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China., Li Y; Shenzhen Key Laboratory of Gene Regulation and Systems Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China.; Department of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China., Deng B; Department of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China.; Institute of Cancer and Genomic Sciences, University of Birmingham, Birmingham B15 2TT, UK., Luo Z; Laboratory of Integrative Biology, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou 510530, China.; Key Laboratory of Regenerative Biology of the Chinese Academy of Sciences and Guangdong Provincial Key Laboratory of Stem Cell and Regenerative Medicine, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou 510530, China., Liu H; Laboratory of Integrative Biology, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou 510530, China.; Key Laboratory of Regenerative Biology of the Chinese Academy of Sciences and Guangdong Provincial Key Laboratory of Stem Cell and Regenerative Medicine, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou 510530, China., Abdul MM; Laboratory of Integrative Biology, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou 510530, China.; Key Laboratory of Regenerative Biology of the Chinese Academy of Sciences and Guangdong Provincial Key Laboratory of Stem Cell and Regenerative Medicine, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou 510530, China., Ward C; Laboratory of Integrative Biology, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou 510530, China.; Key Laboratory of Regenerative Biology of the Chinese Academy of Sciences and Guangdong Provincial Key Laboratory of Stem Cell and Regenerative Medicine, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou 510530, China., Chen M; Department of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China., Fu X; Shenzhen Key Laboratory of Gene Regulation and Systems Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China.; Department of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China., Shi L; Shenzhen Key Laboratory of Gene Regulation and Systems Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China.; Department of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China., Duttlinger M; Department of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China., He J; Center for Cell Lineage and Atlas (CCLA), Bioland Laboratory (Guangzhou Regenerative Medicine and Health Guangdong Laboratory), Guangzhou 510005, China., Sun L; Shenzhen Key Laboratory of Gene Regulation and Systems Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China.; Department of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China., Li W; Laboratory of Integrative Biology, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou 510530, China.; Key Laboratory of Regenerative Biology of the Chinese Academy of Sciences and Guangdong Provincial Key Laboratory of Stem Cell and Regenerative Medicine, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou 510530, China., Zhuang Q; Department of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China., Tong G; Center for Reproductive Medicine, Shuguang Hospital Affiliated to Shanghai University of Traditional Chinese Medicine, Shanghai 200120, China., Frampton J; Institute of Cancer and Genomic Sciences, University of Birmingham, Birmingham B15 2TT, UK., Cazier JB; Institute of Cancer and Genomic Sciences, University of Birmingham, Birmingham B15 2TT, UK.; Centre for Computational Biology, University of Birmingham, Birmingham, UK., Chen J; Key Laboratory of Regenerative Biology of the Chinese Academy of Sciences and Guangdong Provincial Key Laboratory of Stem Cell and Regenerative Medicine, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou 510530, China.; Center for Cell Lineage and Atlas (CCLA), Bioland Laboratory (Guangzhou Regenerative Medicine and Health Guangdong Laboratory), Guangzhou 510005, China.; Joint School of Life Sciences, Guangzhou Medical University and Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou, China., Jauch R; School of Biomedical Sciences, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Hong Kong SAR, China., Esteban MA; Laboratory of Integrative Biology, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou 510530, China.; Key Laboratory of Regenerative Biology of the Chinese Academy of Sciences and Guangdong Provincial Key Laboratory of Stem Cell and Regenerative Medicine, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou 510530, China.; Bioland Laboratory (Guangzhou Regenerative Medicine and Health Guangdong Laboratory), Guangzhou 510005, China., Hutchins AP; Shenzhen Key Laboratory of Gene Regulation and Systems Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China.; Department of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China. |
| Source: | Nucleic acids research [Nucleic Acids Res] 2021 Sep 20; Vol. 49 (16), pp. 9132-9153. |
| Publication Type: | Journal Article; Research Support, Non-U.S. Gov't |
| Journal Info: | Publisher: Oxford University Press Country of Publication: England NLM ID: 0411011 Publication Model: Print Cited Medium: Internet ISSN: 1362-4962 (Electronic) Linking ISSN: 03051048 NLM ISO Abbreviation: Nucleic Acids Res Subsets: MEDLINE |
| Database: | MEDLINE Ultimate |
| FullText | Links: – Type: pdflink Text: Availability: 0 |
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| Header | DbId: mdl DbLabel: MEDLINE Ultimate An: 34390351 AccessLevel: 2 PubType: Academic Journal PubTypeId: academicJournal PreciseRelevancyScore: 0 |
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| Items | – Name: Title Label: Title Group: Ti Data: Transposable element sequence fragments incorporated into coding and noncoding transcripts modulate the transcriptome of human pluripotent stem cells. – Name: Author Label: Authors Group: Au Data: <searchLink fieldCode="AU" term="%22Babarinde+IA%22">Babarinde IA</searchLink>; Shenzhen Key Laboratory of Gene Regulation and Systems Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China.; Department of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China.<br /><searchLink fieldCode="AU" term="%22Ma+G%22">Ma G</searchLink>; Shenzhen Key Laboratory of Gene Regulation and Systems Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China.; Department of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China.<br /><searchLink fieldCode="AU" term="%22Li+Y%22">Li Y</searchLink>; Shenzhen Key Laboratory of Gene Regulation and Systems Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China.; Department of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China.<br /><searchLink fieldCode="AU" term="%22Deng+B%22">Deng B</searchLink>; Department of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China.; Institute of Cancer and Genomic Sciences, University of Birmingham, Birmingham B15 2TT, UK.<br /><searchLink fieldCode="AU" term="%22Luo+Z%22">Luo Z</searchLink>; Laboratory of Integrative Biology, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou 510530, China.; Key Laboratory of Regenerative Biology of the Chinese Academy of Sciences and Guangdong Provincial Key Laboratory of Stem Cell and Regenerative Medicine, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou 510530, China.<br /><searchLink fieldCode="AU" term="%22Liu+H%22">Liu H</searchLink>; Laboratory of Integrative Biology, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou 510530, China.; Key Laboratory of Regenerative Biology of the Chinese Academy of Sciences and Guangdong Provincial Key Laboratory of Stem Cell and Regenerative Medicine, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou 510530, China.<br /><searchLink fieldCode="AU" term="%22Abdul+MM%22">Abdul MM</searchLink>; Laboratory of Integrative Biology, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou 510530, China.; Key Laboratory of Regenerative Biology of the Chinese Academy of Sciences and Guangdong Provincial Key Laboratory of Stem Cell and Regenerative Medicine, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou 510530, China.<br /><searchLink fieldCode="AU" term="%22Ward+C%22">Ward C</searchLink>; Laboratory of Integrative Biology, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou 510530, China.; Key Laboratory of Regenerative Biology of the Chinese Academy of Sciences and Guangdong Provincial Key Laboratory of Stem Cell and Regenerative Medicine, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou 510530, China.<br /><searchLink fieldCode="AU" term="%22Chen+M%22">Chen M</searchLink>; Department of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China.<br /><searchLink fieldCode="AU" term="%22Fu+X%22">Fu X</searchLink>; Shenzhen Key Laboratory of Gene Regulation and Systems Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China.; Department of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China.<br /><searchLink fieldCode="AU" term="%22Shi+L%22">Shi L</searchLink>; Shenzhen Key Laboratory of Gene Regulation and Systems Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China.; Department of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China.<br /><searchLink fieldCode="AU" term="%22Duttlinger+M%22">Duttlinger M</searchLink>; Department of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China.<br /><searchLink fieldCode="AU" term="%22He+J%22">He J</searchLink>; Center for Cell Lineage and Atlas (CCLA), Bioland Laboratory (Guangzhou Regenerative Medicine and Health Guangdong Laboratory), Guangzhou 510005, China.<br /><searchLink fieldCode="AU" term="%22Sun+L%22">Sun L</searchLink>; Shenzhen Key Laboratory of Gene Regulation and Systems Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China.; Department of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China.<br /><searchLink fieldCode="AU" term="%22Li+W%22">Li W</searchLink>; Laboratory of Integrative Biology, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou 510530, China.; Key Laboratory of Regenerative Biology of the Chinese Academy of Sciences and Guangdong Provincial Key Laboratory of Stem Cell and Regenerative Medicine, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou 510530, China.<br /><searchLink fieldCode="AU" term="%22Zhuang+Q%22">Zhuang Q</searchLink>; Department of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China.<br /><searchLink fieldCode="AU" term="%22Tong+G%22">Tong G</searchLink>; Center for Reproductive Medicine, Shuguang Hospital Affiliated to Shanghai University of Traditional Chinese Medicine, Shanghai 200120, China.<br /><searchLink fieldCode="AU" term="%22Frampton+J%22">Frampton J</searchLink>; Institute of Cancer and Genomic Sciences, University of Birmingham, Birmingham B15 2TT, UK.<br /><searchLink fieldCode="AU" term="%22Cazier+JB%22">Cazier JB</searchLink>; Institute of Cancer and Genomic Sciences, University of Birmingham, Birmingham B15 2TT, UK.; Centre for Computational Biology, University of Birmingham, Birmingham, UK.<br /><searchLink fieldCode="AU" term="%22Chen+J%22">Chen J</searchLink>; Key Laboratory of Regenerative Biology of the Chinese Academy of Sciences and Guangdong Provincial Key Laboratory of Stem Cell and Regenerative Medicine, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou 510530, China.; Center for Cell Lineage and Atlas (CCLA), Bioland Laboratory (Guangzhou Regenerative Medicine and Health Guangdong Laboratory), Guangzhou 510005, China.; Joint School of Life Sciences, Guangzhou Medical University and Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou, China.<br /><searchLink fieldCode="AU" term="%22Jauch+R%22">Jauch R</searchLink>; School of Biomedical Sciences, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Hong Kong SAR, China.<br /><searchLink fieldCode="AU" term="%22Esteban+MA%22">Esteban MA</searchLink>; Laboratory of Integrative Biology, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou 510530, China.; Key Laboratory of Regenerative Biology of the Chinese Academy of Sciences and Guangdong Provincial Key Laboratory of Stem Cell and Regenerative Medicine, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou 510530, China.; Bioland Laboratory (Guangzhou Regenerative Medicine and Health Guangdong Laboratory), Guangzhou 510005, China.<br /><searchLink fieldCode="AU" term="%22Hutchins+AP%22">Hutchins AP</searchLink>; Shenzhen Key Laboratory of Gene Regulation and Systems Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China.; Department of Biology, School of Life Sciences, Southern University of Science and Technology, Shenzhen 518055, China. – Name: TitleSource Label: Source Group: Src Data: <searchLink fieldCode="JN" term="%220411011%22">Nucleic acids research</searchLink> [Nucleic Acids Res] 2021 Sep 20; Vol. 49 (16), pp. 9132-9153. – Name: TypePub Label: Publication Type Group: TypPub Data: Journal Article; Research Support, Non-U.S. Gov't – Name: TitleSource Label: Journal Info Group: Src Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22Oxford+University+Press%22">Oxford University Press </searchLink><i>Country of Publication: </i>England <i>NLM ID: </i>0411011 <i>Publication Model: </i>Print <i>Cited Medium: </i>Internet <i>ISSN: </i>1362-4962 (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2203051048%22">03051048 </searchLink><i>NLM ISO Abbreviation: </i>Nucleic Acids Res <i>Subsets: </i>MEDLINE |
| PLink | https://search.ebscohost.com/login.aspx?direct=true&site=eds-live&db=mdl&AN=34390351 |
| RecordInfo | BibRecord: BibEntity: Identifiers: – Type: doi Value: 10.1093/nar/gkab710 Languages: – Code: eng Text: English PhysicalDescription: Pagination: StartPage: 9132 Titles: – TitleFull: Transposable element sequence fragments incorporated into coding and noncoding transcripts modulate the transcriptome of human pluripotent stem cells. Type: main BibRelationships: HasContributorRelationships: – PersonEntity: Name: NameFull: Babarinde IA – PersonEntity: Name: NameFull: Ma G – PersonEntity: Name: NameFull: Li Y – PersonEntity: Name: NameFull: Deng B – PersonEntity: Name: NameFull: Luo Z – PersonEntity: Name: NameFull: Liu H – PersonEntity: Name: NameFull: Abdul MM – PersonEntity: Name: NameFull: Ward C – PersonEntity: Name: NameFull: Chen M – PersonEntity: Name: NameFull: Fu X – PersonEntity: Name: NameFull: Shi L – PersonEntity: Name: NameFull: Duttlinger M – PersonEntity: Name: NameFull: He J – PersonEntity: Name: NameFull: Sun L – PersonEntity: Name: NameFull: Li W – PersonEntity: Name: NameFull: Zhuang Q – PersonEntity: Name: NameFull: Tong G – PersonEntity: Name: NameFull: Frampton J – PersonEntity: Name: NameFull: Cazier JB – PersonEntity: Name: NameFull: Chen J – PersonEntity: Name: NameFull: Jauch R – PersonEntity: Name: NameFull: Esteban MA – PersonEntity: Name: NameFull: Hutchins AP IsPartOfRelationships: – BibEntity: Dates: – D: 20 M: 09 Text: 2021 Sep 20 Type: published Y: 2021 Identifiers: – Type: issn-electronic Value: 1362-4962 Numbering: – Type: volume Value: 49 – Type: issue Value: 16 Titles: – TitleFull: Nucleic acids research Type: main |
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