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ECTyper: in silico Escherichia coli serotype and species prediction from raw and assembled whole-genome sequence data.

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Title: ECTyper: in silico Escherichia coli serotype and species prediction from raw and assembled whole-genome sequence data.
Authors: Bessonov K; National Microbiology Laboratory, Public Health Agency of Canada, Guelph, ON, Canada., Laing C; National Centre for Animal Diseases, Canadian Food Inspection Agency, Lethbridge, Canada., Robertson J; National Microbiology Laboratory, Public Health Agency of Canada, Guelph, ON, Canada., Yong I; National Microbiology Laboratory, Public Health Agency of Canada, Guelph, ON, Canada., Ziebell K; National Microbiology Laboratory, Public Health Agency of Canada, Guelph, ON, Canada., Gannon VPJ; National Microbiology Laboratory, Public Health Agency of Canada, Lethbridge, AB, Canada., Nichani A; National Microbiology Laboratory, Public Health Agency of Canada, Guelph, ON, Canada., Arya G; National Microbiology Laboratory, Public Health Agency of Canada, Guelph, ON, Canada., Nash JHE; National Microbiology Laboratory, Public Health Agency of Canada, Toronto, ON, Canada., Christianson S; National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, MB, Canada.
Source: Microbial genomics [Microb Genom] 2021 Dec; Vol. 7 (12).
Publication Type: Journal Article; Research Support, Non-U.S. Gov't
Journal Info: Publisher: Microbiology Society Country of Publication: England NLM ID: 101671820 Publication Model: Print Cited Medium: Internet ISSN: 2057-5858 (Electronic) Linking ISSN: 20575858 NLM ISO Abbreviation: Microb Genom Subsets: MEDLINE
Database: MEDLINE Ultimate
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PubType: Academic Journal
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  Data: ECTyper: in silico Escherichia coli serotype and species prediction from raw and assembled whole-genome sequence data.
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  Data: <searchLink fieldCode="AU" term="%22Bessonov+K%22">Bessonov K</searchLink>; National Microbiology Laboratory, Public Health Agency of Canada, Guelph, ON, Canada.<br /><searchLink fieldCode="AU" term="%22Laing+C%22">Laing C</searchLink>; National Centre for Animal Diseases, Canadian Food Inspection Agency, Lethbridge, Canada.<br /><searchLink fieldCode="AU" term="%22Robertson+J%22">Robertson J</searchLink>; National Microbiology Laboratory, Public Health Agency of Canada, Guelph, ON, Canada.<br /><searchLink fieldCode="AU" term="%22Yong+I%22">Yong I</searchLink>; National Microbiology Laboratory, Public Health Agency of Canada, Guelph, ON, Canada.<br /><searchLink fieldCode="AU" term="%22Ziebell+K%22">Ziebell K</searchLink>; National Microbiology Laboratory, Public Health Agency of Canada, Guelph, ON, Canada.<br /><searchLink fieldCode="AU" term="%22Gannon+VPJ%22">Gannon VPJ</searchLink>; National Microbiology Laboratory, Public Health Agency of Canada, Lethbridge, AB, Canada.<br /><searchLink fieldCode="AU" term="%22Nichani+A%22">Nichani A</searchLink>; National Microbiology Laboratory, Public Health Agency of Canada, Guelph, ON, Canada.<br /><searchLink fieldCode="AU" term="%22Arya+G%22">Arya G</searchLink>; National Microbiology Laboratory, Public Health Agency of Canada, Guelph, ON, Canada.<br /><searchLink fieldCode="AU" term="%22Nash+JHE%22">Nash JHE</searchLink>; National Microbiology Laboratory, Public Health Agency of Canada, Toronto, ON, Canada.<br /><searchLink fieldCode="AU" term="%22Christianson+S%22">Christianson S</searchLink>; National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, MB, Canada.
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  Data: <searchLink fieldCode="JN" term="%22101671820%22">Microbial genomics</searchLink> [Microb Genom] 2021 Dec; Vol. 7 (12).
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  Data: Journal Article; Research Support, Non-U.S. Gov't
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  Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22Microbiology+Society%22">Microbiology Society </searchLink><i>Country of Publication: </i>England <i>NLM ID: </i>101671820 <i>Publication Model: </i>Print <i>Cited Medium: </i>Internet <i>ISSN: </i>2057-5858 (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2220575858%22">20575858 </searchLink><i>NLM ISO Abbreviation: </i>Microb Genom <i>Subsets: </i>MEDLINE
PLink https://search.ebscohost.com/login.aspx?direct=true&site=eds-live&db=mdl&AN=34860150
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      – Type: doi
        Value: 10.1099/mgen.0.000728
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      – Code: eng
        Text: English
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      – TitleFull: ECTyper: in silico Escherichia coli serotype and species prediction from raw and assembled whole-genome sequence data.
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          Dates:
            – D: 01
              M: 12
              Text: 2021 Dec
              Type: published
              Y: 2021
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              Value: 12
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            – TitleFull: Microbial genomics
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