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Context-specific emergence and growth of the SARS-CoV-2 Delta variant.

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Title: Context-specific emergence and growth of the SARS-CoV-2 Delta variant.
Authors: McCrone JT; Institute of Evolutionary Biology, University of Edinburgh, Edinburgh, UK.; contributed equally as first authors., Hill V; Institute of Evolutionary Biology, University of Edinburgh, Edinburgh, UK.; contributed equally as first authors., Bajaj S; Department of Zoology, University of Oxford, Oxford, UK.; contributed equally as first authors., Pena RE; Department of Zoology, University of Oxford, Oxford, UK.; contributed equally as first authors., Lambert BC; Department of Computer Science, University of Oxford, Oxford, UK., Inward R; Department of Zoology, University of Oxford, Oxford, UK.; MRC Centre of Global Infectious Disease Analysis, Jameel Institute for Disease and Emergency Analytics, Imperial College London, London, UK., Bhatt S; MRC Centre of Global Infectious Disease Analysis, Jameel Institute for Disease and Emergency Analytics, Imperial College London, London, UK.; Section of Epidemiology, Department of Public Health, University of Copenhagen, Copenhagen, Denmark., Volz E; MRC Centre of Global Infectious Disease Analysis, Jameel Institute for Disease and Emergency Analytics, Imperial College London, London, UK., Ruis C; Molecular Immunity Unit, Department of Medicine, Cambridge University, Cambridge, UK., Dellicour S; Spatial Epidemiology Lab (SpELL), Université Libre de Bruxelles, Bruxelles, Belgium.; Department of Microbiology, Immunology and Transplantation, Rega Institute, KU Leuven, Leuven, Belgium., Baele G; Department of Microbiology, Immunology and Transplantation, Rega Institute, KU Leuven, Leuven, Belgium., Zarebski AE; Department of Zoology, University of Oxford, Oxford, UK., Sadilek A; Google, Mountain View, CA, USA., Wu N; Google, Mountain View, CA, USA., Schneider A; Google, Mountain View, CA, USA., Ji X; Department of Mathematics, School of Science & Engineering, Tulane University, New Orleans, LA, USA., Raghwani J; Department of Zoology, University of Oxford, Oxford, UK., Jackson B; Institute of Evolutionary Biology, University of Edinburgh, Edinburgh, UK., Colquhoun R; Institute of Evolutionary Biology, University of Edinburgh, Edinburgh, UK., O'Toole Á; Institute of Evolutionary Biology, University of Edinburgh, Edinburgh, UK., Peacock TP; Department of Infectious Disease, Imperial College London, London, UK.; UK Health Security Agency, London, UK., Twohig K; UK Health Security Agency, London, UK., Thelwall S; UK Health Security Agency, London, UK., Dabrera G; UK Health Security Agency, London, UK., Myers R; UK Health Security Agency, London, UK., Faria NR; Department of Zoology, University of Oxford, Oxford, UK.; MRC Centre of Global Infectious Disease Analysis, Jameel Institute for Disease and Emergency Analytics, Imperial College London, London, UK.; Instituto de Medicina Tropical, Faculdade de Medicina da Universidade de Sao Paulo, Sao Paulo, Brazil., Huber C; BlueDot, Toronto, Canada., Bogoch II; Divisions of Internal Medicine & Infectious Diseases, Toronto General Hospital, University Health Network, Toronto, Canada.; Department of Medicine, Division of Infectious Diseases, University of Toronto, ON, Canada., Khan K; BlueDot, Toronto, Canada.; Department of Medicine, Division of Infectious Diseases, University of Toronto, ON, Canada.; Li Ka Shing Knowledge Institute, St. Michael's Hospital, Toronto, ON, Canada., du Plessis L; Department of Zoology, University of Oxford, Oxford, UK., Barrett JC; Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton, UK., Aanensen DM; Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton, UK.; Big Data Institute, Li Ka Shing Centre for Health Information and Discovery, Nuffield Department of Medicine, University of Oxford, Oxford, UK., Barclay WS; Department of Infectious Disease, Imperial College London, London, UK., Chand M; UK Health Security Agency, London, UK., Connor T; Pathogen Genomics Unit, Public Health Wales NHS Trust, Cardiff, UK.; School of Biosciences, The Sir Martin Evans Building, Cardiff University, Cardiff, UK.; Quadram Institute, Norwich, UK., Loman NJ; Institute of Microbiology and Infection, University of Birmingham, Birmingham, UK., Suchard MA; Departments of Biostatistics, Biomathematics and Human Genetics, University of California, Los Angeles, Los Angeles, CA, USA., Pybus OG; Department of Zoology, University of Oxford, Oxford, UK.; Department of Pathobiology and Population Sciences, Royal Veterinary College London, London, UK.; jointly supervised this work., Rambaut A; Institute of Evolutionary Biology, University of Edinburgh, Edinburgh, UK.; jointly supervised this work., Kraemer MUG; Department of Zoology, University of Oxford, Oxford, UK.; jointly supervised this work.
Corporate Authors: COVID-19 genomics UK (COG-UK) consortium
Source: MedRxiv : the preprint server for health sciences [medRxiv] 2021 Dec 21. Date of Electronic Publication: 2021 Dec 21.
Publication Type: Preprint; Journal Article
Journal Info: Country of Publication: United States NLM ID: 101767986 Publication Model: Electronic Cited Medium: Internet NLM ISO Abbreviation: medRxiv Subsets: PubMed not MEDLINE
Database: MEDLINE Ultimate
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