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Noncoding genetic variation in GATA3 increases acute lymphoblastic leukemia risk through local and global changes in chromatin conformation.

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Title: Noncoding genetic variation in GATA3 increases acute lymphoblastic leukemia risk through local and global changes in chromatin conformation.
Authors: Yang H; Department of Biochemistry and Molecular Genetics, Feinberg School of Medicine Northwestern University, Chicago, IL, USA.; Robert H. Lurie Comprehensive Cancer Center of Northwestern University, Chicago, IL, USA.; Obstetrics and Gynecology Hospital, Institute of Reproduction and Development, Fudan University, Shanghai, China., Zhang H; Department of Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, TN, USA.; Department of Hematology/Oncology, Guangzhou Women and Children's Medical Center, Guangzhou, China.; Department of Hematology/Oncology, Shanghai Children's Medical Center, Shanghai, China., Luan Y; Department of Biochemistry and Molecular Genetics, Feinberg School of Medicine Northwestern University, Chicago, IL, USA., Liu T; Department of Biochemistry and Molecular Genetics, Feinberg School of Medicine Northwestern University, Chicago, IL, USA., Yang W; Department of Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, TN, USA., Roberts KG; Department of Pathology, St. Jude Children's Research Hospital, Memphis, TN, USA., Qian MX; Department of Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, TN, USA., Zhang B; Bioinformatics and Genomics Program, The Pennsylvania State University, University Park, PA, USA., Yang W; Department of Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, TN, USA., Perez-Andreu V; Department of Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, TN, USA.; Internal Medicine Department, MountainView Hospital, University of Reno, Las Vegas, NV, USA., Xu J; Department of Biochemistry and Molecular Biology, Penn State School of Medicine, Hershey, PA, USA., Iyyanki S; Department of Biochemistry and Molecular Biology, Penn State School of Medicine, Hershey, PA, USA., Kuang D; Department of Computer and Information Science, University of Pennsylvania, Philadelphia, PA, USA., Stasiak LA; Department of Biochemistry and Molecular Genetics, Feinberg School of Medicine Northwestern University, Chicago, IL, USA., Reshmi SC; Department of Pathology and Laboratory Medicine, Nationwide Children's Hospital, Columbus, OH, USA.; Department of Pediatrics, Ohio State University School of Medicine, Columbus, OH, USA., Gastier-Foster J; Department of Pathology and Laboratory Medicine, Nationwide Children's Hospital, Columbus, OH, USA.; Department of Pediatrics, Ohio State University School of Medicine, Columbus, OH, USA., Smith C; Department of Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, TN, USA., Pui CH; Department of Oncology, St. Jude Children's Research Hospital, Memphis, TN, USA., Evans WE; Department of Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, TN, USA., Hunger SP; Division of Oncology and the Center for Childhood Cancer Research, Children's Hospital of Philadelphia and the Perelman School of Medicine at the University of Pennsylvania, Philadelphia, PA, USA., Platanias LC; Robert H. Lurie Comprehensive Cancer Center of Northwestern University, Chicago, IL, USA., Relling MV; Department of Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, TN, USA., Mullighan CG; Department of Pathology, St. Jude Children's Research Hospital, Memphis, TN, USA., Loh ML; Department of Pediatrics, Benioff Children's Hospital and the Helen Diller Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA, USA., Yue F; Department of Biochemistry and Molecular Genetics, Feinberg School of Medicine Northwestern University, Chicago, IL, USA. yue@northwestern.edu.; Robert H. Lurie Comprehensive Cancer Center of Northwestern University, Chicago, IL, USA. yue@northwestern.edu., Yang JJ; Department of Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, TN, USA. jun.yang@stjude.org.
Source: Nature genetics [Nat Genet] 2022 Feb; Vol. 54 (2), pp. 170-179. Date of Electronic Publication: 2022 Feb 03.
Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't
Journal Info: Publisher: Nature Pub. Co Country of Publication: United States NLM ID: 9216904 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1546-1718 (Electronic) Linking ISSN: 10614036 NLM ISO Abbreviation: Nat Genet Subsets: MEDLINE
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  Data: Noncoding genetic variation in GATA3 increases acute lymphoblastic leukemia risk through local and global changes in chromatin conformation.
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Lurie Comprehensive Cancer Center of Northwestern University, Chicago, IL, USA.; Obstetrics and Gynecology Hospital, Institute of Reproduction and Development, Fudan University, Shanghai, China.<br /><searchLink fieldCode="AU" term="%22Zhang+H%22">Zhang H</searchLink>; Department of Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, TN, USA.; Department of Hematology/Oncology, Guangzhou Women and Children's Medical Center, Guangzhou, China.; Department of Hematology/Oncology, Shanghai Children's Medical Center, Shanghai, China.<br /><searchLink fieldCode="AU" term="%22Luan+Y%22">Luan Y</searchLink>; Department of Biochemistry and Molecular Genetics, Feinberg School of Medicine Northwestern University, Chicago, IL, USA.<br /><searchLink fieldCode="AU" term="%22Liu+T%22">Liu T</searchLink>; Department of Biochemistry and Molecular Genetics, Feinberg School of Medicine Northwestern University, Chicago, IL, USA.<br /><searchLink fieldCode="AU" term="%22Yang+W%22">Yang W</searchLink>; Department of Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, TN, USA.<br /><searchLink fieldCode="AU" term="%22Roberts+KG%22">Roberts KG</searchLink>; Department of Pathology, St. Jude Children's Research Hospital, Memphis, TN, USA.<br /><searchLink fieldCode="AU" term="%22Qian+MX%22">Qian MX</searchLink>; Department of Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, TN, USA.<br /><searchLink fieldCode="AU" term="%22Zhang+B%22">Zhang B</searchLink>; Bioinformatics and Genomics Program, The Pennsylvania State University, University Park, PA, USA.<br /><searchLink fieldCode="AU" term="%22Yang+W%22">Yang W</searchLink>; Department of Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, TN, USA.<br /><searchLink fieldCode="AU" term="%22Perez-Andreu+V%22">Perez-Andreu V</searchLink>; Department of Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, TN, USA.; Internal Medicine Department, MountainView Hospital, University of Reno, Las Vegas, NV, USA.<br /><searchLink fieldCode="AU" term="%22Xu+J%22">Xu J</searchLink>; Department of Biochemistry and Molecular Biology, Penn State School of Medicine, Hershey, PA, USA.<br /><searchLink fieldCode="AU" term="%22Iyyanki+S%22">Iyyanki S</searchLink>; Department of Biochemistry and Molecular Biology, Penn State School of Medicine, Hershey, PA, USA.<br /><searchLink fieldCode="AU" term="%22Kuang+D%22">Kuang D</searchLink>; Department of Computer and Information Science, University of Pennsylvania, Philadelphia, PA, USA.<br /><searchLink fieldCode="AU" term="%22Stasiak+LA%22">Stasiak LA</searchLink>; Department of Biochemistry and Molecular Genetics, Feinberg School of Medicine Northwestern University, Chicago, IL, USA.<br /><searchLink fieldCode="AU" term="%22Reshmi+SC%22">Reshmi SC</searchLink>; Department of Pathology and Laboratory Medicine, Nationwide Children's Hospital, Columbus, OH, USA.; Department of Pediatrics, Ohio State University School of Medicine, Columbus, OH, USA.<br /><searchLink fieldCode="AU" term="%22Gastier-Foster+J%22">Gastier-Foster J</searchLink>; Department of Pathology and Laboratory Medicine, Nationwide Children's Hospital, Columbus, OH, USA.; Department of Pediatrics, Ohio State University School of Medicine, Columbus, OH, USA.<br /><searchLink fieldCode="AU" term="%22Smith+C%22">Smith C</searchLink>; Department of Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, TN, USA.<br /><searchLink fieldCode="AU" term="%22Pui+CH%22">Pui CH</searchLink>; Department of Oncology, St. Jude Children's Research Hospital, Memphis, TN, USA.<br /><searchLink fieldCode="AU" term="%22Evans+WE%22">Evans WE</searchLink>; Department of Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, TN, USA.<br /><searchLink fieldCode="AU" term="%22Hunger+SP%22">Hunger SP</searchLink>; Division of Oncology and the Center for Childhood Cancer Research, Children's Hospital of Philadelphia and the Perelman School of Medicine at the University of Pennsylvania, Philadelphia, PA, USA.<br /><searchLink fieldCode="AU" term="%22Platanias+LC%22">Platanias LC</searchLink>; Robert H. Lurie Comprehensive Cancer Center of Northwestern University, Chicago, IL, USA.<br /><searchLink fieldCode="AU" term="%22Relling+MV%22">Relling MV</searchLink>; Department of Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, TN, USA.<br /><searchLink fieldCode="AU" term="%22Mullighan+CG%22">Mullighan CG</searchLink>; Department of Pathology, St. Jude Children's Research Hospital, Memphis, TN, USA.<br /><searchLink fieldCode="AU" term="%22Loh+ML%22">Loh ML</searchLink>; Department of Pediatrics, Benioff Children's Hospital and the Helen Diller Comprehensive Cancer Center, University of California, San Francisco, San Francisco, CA, USA.<br /><searchLink fieldCode="AU" term="%22Yue+F%22">Yue F</searchLink>; Department of Biochemistry and Molecular Genetics, Feinberg School of Medicine Northwestern University, Chicago, IL, USA. yue@northwestern.edu.; Robert H. Lurie Comprehensive Cancer Center of Northwestern University, Chicago, IL, USA. yue@northwestern.edu.<br /><searchLink fieldCode="AU" term="%22Yang+JJ%22">Yang JJ</searchLink>; Department of Pharmaceutical Sciences, St. Jude Children's Research Hospital, Memphis, TN, USA. jun.yang@stjude.org.
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