In silico analysis of mutant epitopes in new SARS-CoV-2 lineages suggest global enhanced CD8+ T cell reactivity and also signs of immune response escape.
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| Title: | In silico analysis of mutant epitopes in new SARS-CoV-2 lineages suggest global enhanced CD8+ T cell reactivity and also signs of immune response escape. |
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| Authors: | Pretti MAM; Laboratory of Bioinformatics and Computational Biology, Division of Experimental and Translational Research, Brazilian National Cancer Institute (INCA), Rio de Janeiro, Brazil; Program of Immunology and Tumor Biology, Division of Experimental and Translational Research, Brazilian National Cancer Institute (INCA), Rio de Janeiro, Brazil. Electronic address: marco.pretti@inca.gov.br., Galvani RG; Laboratory of Bioinformatics and Computational Biology, Division of Experimental and Translational Research, Brazilian National Cancer Institute (INCA), Rio de Janeiro, Brazil; Faculdade de Biomedicina, Universidade Veiga de Almeida, Rio de Janeiro, Brazil; Laboratory for Thymus Research (LPT), Oswaldo Cruz Institute, Oswaldo Cruz Foundation (FIOCRUZ), Rio de Janeiro, Brazil. Electronic address: romulo.galvani@uva.br., Scherer NM; Laboratory of Bioinformatics and Computational Biology, Division of Experimental and Translational Research, Brazilian National Cancer Institute (INCA), Rio de Janeiro, Brazil. Electronic address: nscherer@inca.gov.br., Farias AS; Autoimmune Research Laboratory, Department of Genetics, Microbiology and Immunology, Institute of Biology, University of Campinas (UNICAMP), Campinas, Brazil; Obesity and Comorbidities Research Center (OCRC), University of Campinas (UNICAMP), Campinas, Brazil; National Institute of Science and Technology on Neuroimmunomodulation (INCT-NIM), Oswaldo Cruz Institute, Oswaldo Cruz Foundation, Rio de Janeiro, Brazil; Experimental Medicine Research Cluster (EMRC), University of Campinas (UNICAMP), Campinas, Brazil. Electronic address: asfarias@unicamp.br., Boroni M; Laboratory of Bioinformatics and Computational Biology, Division of Experimental and Translational Research, Brazilian National Cancer Institute (INCA), Rio de Janeiro, Brazil; Experimental Medicine Research Cluster (EMRC), University of Campinas (UNICAMP), Campinas, Brazil. Electronic address: mariana.boroni@inca.gov.br. |
| Source: | Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases [Infect Genet Evol] 2022 Apr; Vol. 99, pp. 105236. Date of Electronic Publication: 2022 Feb 08. |
| Publication Type: | Journal Article; Research Support, Non-U.S. Gov't |
| Journal Info: | Publisher: Elsevier Science Country of Publication: Netherlands NLM ID: 101084138 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1567-7257 (Electronic) Linking ISSN: 15671348 NLM ISO Abbreviation: Infect Genet Evol Subsets: MEDLINE |
| Database: | MEDLINE Ultimate |
| FullText | Text: Availability: 0 |
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| Header | DbId: mdl DbLabel: MEDLINE Ultimate An: 35149224 AccessLevel: 2 PubType: Academic Journal PubTypeId: academicJournal PreciseRelevancyScore: 0 |
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| Items | – Name: Title Label: Title Group: Ti Data: In silico analysis of mutant epitopes in new SARS-CoV-2 lineages suggest global enhanced CD8+ T cell reactivity and also signs of immune response escape. – Name: Author Label: Authors Group: Au Data: <searchLink fieldCode="AU" term="%22Pretti+MAM%22">Pretti MAM</searchLink>; Laboratory of Bioinformatics and Computational Biology, Division of Experimental and Translational Research, Brazilian National Cancer Institute (INCA), Rio de Janeiro, Brazil; Program of Immunology and Tumor Biology, Division of Experimental and Translational Research, Brazilian National Cancer Institute (INCA), Rio de Janeiro, Brazil. Electronic address: marco.pretti@inca.gov.br.<br /><searchLink fieldCode="AU" term="%22Galvani+RG%22">Galvani RG</searchLink>; Laboratory of Bioinformatics and Computational Biology, Division of Experimental and Translational Research, Brazilian National Cancer Institute (INCA), Rio de Janeiro, Brazil; Faculdade de Biomedicina, Universidade Veiga de Almeida, Rio de Janeiro, Brazil; Laboratory for Thymus Research (LPT), Oswaldo Cruz Institute, Oswaldo Cruz Foundation (FIOCRUZ), Rio de Janeiro, Brazil. Electronic address: romulo.galvani@uva.br.<br /><searchLink fieldCode="AU" term="%22Scherer+NM%22">Scherer NM</searchLink>; Laboratory of Bioinformatics and Computational Biology, Division of Experimental and Translational Research, Brazilian National Cancer Institute (INCA), Rio de Janeiro, Brazil. Electronic address: nscherer@inca.gov.br.<br /><searchLink fieldCode="AU" term="%22Farias+AS%22">Farias AS</searchLink>; Autoimmune Research Laboratory, Department of Genetics, Microbiology and Immunology, Institute of Biology, University of Campinas (UNICAMP), Campinas, Brazil; Obesity and Comorbidities Research Center (OCRC), University of Campinas (UNICAMP), Campinas, Brazil; National Institute of Science and Technology on Neuroimmunomodulation (INCT-NIM), Oswaldo Cruz Institute, Oswaldo Cruz Foundation, Rio de Janeiro, Brazil; Experimental Medicine Research Cluster (EMRC), University of Campinas (UNICAMP), Campinas, Brazil. Electronic address: asfarias@unicamp.br.<br /><searchLink fieldCode="AU" term="%22Boroni+M%22">Boroni M</searchLink>; Laboratory of Bioinformatics and Computational Biology, Division of Experimental and Translational Research, Brazilian National Cancer Institute (INCA), Rio de Janeiro, Brazil; Experimental Medicine Research Cluster (EMRC), University of Campinas (UNICAMP), Campinas, Brazil. Electronic address: mariana.boroni@inca.gov.br. – Name: TitleSource Label: Source Group: Src Data: <searchLink fieldCode="JN" term="%22101084138%22">Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases</searchLink> [Infect Genet Evol] 2022 Apr; Vol. 99, pp. 105236. <i>Date of Electronic Publication: </i>2022 Feb 08. – Name: TypePub Label: Publication Type Group: TypPub Data: Journal Article; Research Support, Non-U.S. Gov't – Name: TitleSource Label: Journal Info Group: Src Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22Elsevier+Science%22">Elsevier Science </searchLink><i>Country of Publication: </i>Netherlands <i>NLM ID: </i>101084138 <i>Publication Model: </i>Print-Electronic <i>Cited Medium: </i>Internet <i>ISSN: </i>1567-7257 (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2215671348%22">15671348 </searchLink><i>NLM ISO Abbreviation: </i>Infect Genet Evol <i>Subsets: </i>MEDLINE |
| PLink | https://search.ebscohost.com/login.aspx?direct=true&site=eds-live&db=mdl&AN=35149224 |
| RecordInfo | BibRecord: BibEntity: Identifiers: – Type: doi Value: 10.1016/j.meegid.2022.105236 Languages: – Code: eng Text: English PhysicalDescription: Pagination: StartPage: 105236 Titles: – TitleFull: In silico analysis of mutant epitopes in new SARS-CoV-2 lineages suggest global enhanced CD8+ T cell reactivity and also signs of immune response escape. Type: main BibRelationships: HasContributorRelationships: – PersonEntity: Name: NameFull: Pretti MAM – PersonEntity: Name: NameFull: Galvani RG – PersonEntity: Name: NameFull: Scherer NM – PersonEntity: Name: NameFull: Farias AS – PersonEntity: Name: NameFull: Boroni M IsPartOfRelationships: – BibEntity: Dates: – D: 01 M: 04 Text: 2022 Apr Type: published Y: 2022 Identifiers: – Type: issn-electronic Value: 1567-7257 Numbering: – Type: volume Value: 99 Titles: – TitleFull: Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases Type: main |
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