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Multiscale PHATE identifies multimodal signatures of COVID-19.

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Title: Multiscale PHATE identifies multimodal signatures of COVID-19.
Authors: Kuchroo M; Department of Neuroscience, Yale University, New Haven, CT, USA., Huang J; Department of Computer Science, Yale University, New Haven, CT, USA., Wong P; Department of Immunobiology, Yale University, New Haven, CT, USA., Grenier JC; Montreal Heart Institute, Montreal, Quebec, Canada., Shung D; Department of Medicine, Yale University, New Haven, CT, USA., Tong A; Department of Computer Science, Yale University, New Haven, CT, USA., Lucas C; Department of Immunobiology, Yale University, New Haven, CT, USA., Klein J; Department of Immunobiology, Yale University, New Haven, CT, USA., Burkhardt DB; Department of Genetics, Yale University, New Haven, CT, USA., Gigante S; Computational Biology, Bioinformatics Program, Yale University, New Haven, CT, USA., Godavarthi A; Department of Applied Mathematics, Yale University, New Haven, CT, USA., Rieck B; Department of Biosystems Science and Engineering, ETH Zurich, Zurich, Switzerland., Israelow B; Department of Immunobiology, Yale University, New Haven, CT, USA.; Section of Infectious Diseases, Department of Medicine, Yale University School of Medicine, New Haven, CT, USA., Simonov M; Department of Medicine, Yale University, New Haven, CT, USA., Mao T; Department of Immunobiology, Yale University, New Haven, CT, USA., Oh JE; Department of Immunobiology, Yale University, New Haven, CT, USA., Silva J; Department of Immunobiology, Yale University, New Haven, CT, USA., Takahashi T; Department of Immunobiology, Yale University, New Haven, CT, USA., Odio CD; Department of Medicine, Yale University, New Haven, CT, USA., Casanovas-Massana A; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT, USA., Fournier J; Section of Infectious Diseases, Department of Medicine, Yale University School of Medicine, New Haven, CT, USA., Farhadian S; Section of Infectious Diseases, Department of Medicine, Yale University School of Medicine, New Haven, CT, USA., Dela Cruz CS; Section of Pulmonary and Critical Care Medicine, Department of Medicine, Yale University School of Medicine, New Haven, CT, USA.; Department of Medicine, West Haven Connecticut Veterans Affairs Medical Center, West Haven, CT, USA., Ko AI; Section of Infectious Diseases, Department of Medicine, Yale University School of Medicine, New Haven, CT, USA.; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT, USA., Hirn MJ; Department of Mathematics, Michigan State University, East Lansing, MI, USA.; Department of Computational Mathematics, Science and Engineering, Michigan State University, East Lansing, MI, USA., Wilson FP; Clinical and Translational Research Accelerator, Department of Medicine, Yale University, New Haven, CT, USA., Hussin JG; Montreal Heart Institute, Montreal, Quebec, Canada.; Faculty of Medicine, Université de Montréal, Montreal, Quebec, Canada., Wolf G; Mila - Quebec AI institute, Montreal, Quebec, Canada.; Department of Mathematics and Statistics, Université de Montréal, Montreal, Quebec, Canada., Iwasaki A; Department of Immunobiology, Yale University, New Haven, CT, USA.; Howard Hughes Medical Institute, Chevy Chase, MD, USA., Krishnaswamy S; Department of Computer Science, Yale University, New Haven, CT, USA. smita.krishnaswamy@yale.edu.; Department of Genetics, Yale University, New Haven, CT, USA. smita.krishnaswamy@yale.edu.
Corporate Authors: Yale IMPACT Team
Source: Nature biotechnology [Nat Biotechnol] 2022 May; Vol. 40 (5), pp. 681-691. Date of Electronic Publication: 2022 Feb 28.
Publication Type: Journal Article; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, P.H.S.
Journal Info: Publisher: Nature America Publishing Country of Publication: United States NLM ID: 9604648 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1546-1696 (Electronic) Linking ISSN: 10870156 NLM ISO Abbreviation: Nat Biotechnol Subsets: MEDLINE
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  Data: <searchLink fieldCode="AU" term="%22Kuchroo+M%22">Kuchroo M</searchLink>; Department of Neuroscience, Yale University, New Haven, CT, USA.<br /><searchLink fieldCode="AU" term="%22Huang+J%22">Huang J</searchLink>; Department of Computer Science, Yale University, New Haven, CT, USA.<br /><searchLink fieldCode="AU" term="%22Wong+P%22">Wong P</searchLink>; Department of Immunobiology, Yale University, New Haven, CT, USA.<br /><searchLink fieldCode="AU" term="%22Grenier+JC%22">Grenier JC</searchLink>; Montreal Heart Institute, Montreal, Quebec, Canada.<br /><searchLink fieldCode="AU" term="%22Shung+D%22">Shung D</searchLink>; Department of Medicine, Yale University, New Haven, CT, USA.<br /><searchLink fieldCode="AU" term="%22Tong+A%22">Tong A</searchLink>; Department of Computer Science, Yale University, New Haven, CT, USA.<br /><searchLink fieldCode="AU" term="%22Lucas+C%22">Lucas C</searchLink>; Department of Immunobiology, Yale University, New Haven, CT, USA.<br /><searchLink fieldCode="AU" term="%22Klein+J%22">Klein J</searchLink>; Department of Immunobiology, Yale University, New Haven, CT, USA.<br /><searchLink fieldCode="AU" term="%22Burkhardt+DB%22">Burkhardt DB</searchLink>; Department of Genetics, Yale University, New Haven, CT, USA.<br /><searchLink fieldCode="AU" term="%22Gigante+S%22">Gigante S</searchLink>; Computational Biology, Bioinformatics Program, Yale University, New Haven, CT, USA.<br /><searchLink fieldCode="AU" term="%22Godavarthi+A%22">Godavarthi A</searchLink>; Department of Applied Mathematics, Yale University, New Haven, CT, USA.<br /><searchLink fieldCode="AU" term="%22Rieck+B%22">Rieck B</searchLink>; Department of Biosystems Science and Engineering, ETH Zurich, Zurich, Switzerland.<br /><searchLink fieldCode="AU" term="%22Israelow+B%22">Israelow B</searchLink>; Department of Immunobiology, Yale University, New Haven, CT, USA.; Section of Infectious Diseases, Department of Medicine, Yale University School of Medicine, New Haven, CT, USA.<br /><searchLink fieldCode="AU" term="%22Simonov+M%22">Simonov M</searchLink>; 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Section of Infectious Diseases, Department of Medicine, Yale University School of Medicine, New Haven, CT, USA.<br /><searchLink fieldCode="AU" term="%22Farhadian+S%22">Farhadian S</searchLink>; Section of Infectious Diseases, Department of Medicine, Yale University School of Medicine, New Haven, CT, USA.<br /><searchLink fieldCode="AU" term="%22Dela+Cruz+CS%22">Dela Cruz CS</searchLink>; Section of Pulmonary and Critical Care Medicine, Department of Medicine, Yale University School of Medicine, New Haven, CT, USA.; Department of Medicine, West Haven Connecticut Veterans Affairs Medical Center, West Haven, CT, USA.<br /><searchLink fieldCode="AU" term="%22Ko+AI%22">Ko AI</searchLink>; Section of Infectious Diseases, Department of Medicine, Yale University School of Medicine, New Haven, CT, USA.; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, CT, USA.<br /><searchLink fieldCode="AU" term="%22Hirn+MJ%22">Hirn MJ</searchLink>; Department of Mathematics, Michigan State University, East Lansing, MI, USA.; 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Department of Computer Science, Yale University, New Haven, CT, USA. smita.krishnaswamy@yale.edu.; Department of Genetics, Yale University, New Haven, CT, USA. smita.krishnaswamy@yale.edu.
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  Data: <searchLink fieldCode="JN" term="%229604648%22">Nature biotechnology</searchLink> [Nat Biotechnol] 2022 May; Vol. 40 (5), pp. 681-691. <i>Date of Electronic Publication: </i>2022 Feb 28.
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