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Computation and visualization of cell-cell signaling topologies in single-cell systems data using Connectome.

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Title: Computation and visualization of cell-cell signaling topologies in single-cell systems data using Connectome.
Authors: Raredon MSB; Department of Biomedical Engineering, Yale University, New Haven, CT, USA. michasam.raredon@yale.edu.; Medical Scientist Training Program, Yale School of Medicine, New Haven, CT, USA. michasam.raredon@yale.edu., Yang J; Interdepartmental Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA., Garritano J; Medical Scientist Training Program, Yale School of Medicine, New Haven, CT, USA.; Applied Mathematics Program, Yale University, New Haven, CT, USA., Wang M; Interdepartmental Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA., Kushnir D; NOKIA Bell-Laboratories, Murray Hill, NJ, USA., Schupp JC; Section of Pulmonary, Critical Care, and Sleep Medicine, Yale School of Medicine, New Haven, CT, USA., Adams TS; Section of Pulmonary, Critical Care, and Sleep Medicine, Yale School of Medicine, New Haven, CT, USA., Greaney AM; Department of Biomedical Engineering, Yale University, New Haven, CT, USA., Leiby KL; Department of Biomedical Engineering, Yale University, New Haven, CT, USA.; Medical Scientist Training Program, Yale School of Medicine, New Haven, CT, USA., Kaminski N; Section of Pulmonary, Critical Care, and Sleep Medicine, Yale School of Medicine, New Haven, CT, USA., Kluger Y; Applied Mathematics Program, Yale University, New Haven, CT, USA.; Department of Pathology, Yale University, New Haven, CT, USA.; Interdepartmental Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA., Levchenko A; Department of Biomedical Engineering, Yale University, New Haven, CT, USA.; Yale Systems Biology Institute, Yale University, West Haven, CT, USA., Niklason LE; Department of Biomedical Engineering, Yale University, New Haven, CT, USA. laura.niklason@yale.edu.; Department of Anesthesiology, Yale School of Medicine, New Haven, CT, USA. laura.niklason@yale.edu.
Source: Scientific reports [Sci Rep] 2022 Mar 09; Vol. 12 (1), pp. 4187. Date of Electronic Publication: 2022 Mar 09.
Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.
Journal Info: Publisher: Nature Publishing Group Country of Publication: England NLM ID: 101563288 Publication Model: Electronic Cited Medium: Internet ISSN: 2045-2322 (Electronic) Linking ISSN: 20452322 NLM ISO Abbreviation: Sci Rep Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: <searchLink fieldCode="AU" term="%22Raredon+MSB%22">Raredon MSB</searchLink>; Department of Biomedical Engineering, Yale University, New Haven, CT, USA. michasam.raredon@yale.edu.; Medical Scientist Training Program, Yale School of Medicine, New Haven, CT, USA. michasam.raredon@yale.edu.<br /><searchLink fieldCode="AU" term="%22Yang+J%22">Yang J</searchLink>; Interdepartmental Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA.<br /><searchLink fieldCode="AU" term="%22Garritano+J%22">Garritano J</searchLink>; Medical Scientist Training Program, Yale School of Medicine, New Haven, CT, USA.; Applied Mathematics Program, Yale University, New Haven, CT, USA.<br /><searchLink fieldCode="AU" term="%22Wang+M%22">Wang M</searchLink>; Interdepartmental Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA.<br /><searchLink fieldCode="AU" term="%22Kushnir+D%22">Kushnir D</searchLink>; NOKIA Bell-Laboratories, Murray Hill, NJ, USA.<br /><searchLink fieldCode="AU" term="%22Schupp+JC%22">Schupp JC</searchLink>; Section of Pulmonary, Critical Care, and Sleep Medicine, Yale School of Medicine, New Haven, CT, USA.<br /><searchLink fieldCode="AU" term="%22Adams+TS%22">Adams TS</searchLink>; Section of Pulmonary, Critical Care, and Sleep Medicine, Yale School of Medicine, New Haven, CT, USA.<br /><searchLink fieldCode="AU" term="%22Greaney+AM%22">Greaney AM</searchLink>; Department of Biomedical Engineering, Yale University, New Haven, CT, USA.<br /><searchLink fieldCode="AU" term="%22Leiby+KL%22">Leiby KL</searchLink>; Department of Biomedical Engineering, Yale University, New Haven, CT, USA.; Medical Scientist Training Program, Yale School of Medicine, New Haven, CT, USA.<br /><searchLink fieldCode="AU" term="%22Kaminski+N%22">Kaminski N</searchLink>; Section of Pulmonary, Critical Care, and Sleep Medicine, Yale School of Medicine, New Haven, CT, USA.<br /><searchLink fieldCode="AU" term="%22Kluger+Y%22">Kluger Y</searchLink>; Applied Mathematics Program, Yale University, New Haven, CT, USA.; Department of Pathology, Yale University, New Haven, CT, USA.; Interdepartmental Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA.<br /><searchLink fieldCode="AU" term="%22Levchenko+A%22">Levchenko A</searchLink>; Department of Biomedical Engineering, Yale University, New Haven, CT, USA.; Yale Systems Biology Institute, Yale University, West Haven, CT, USA.<br /><searchLink fieldCode="AU" term="%22Niklason+LE%22">Niklason LE</searchLink>; Department of Biomedical Engineering, Yale University, New Haven, CT, USA. laura.niklason@yale.edu.; Department of Anesthesiology, Yale School of Medicine, New Haven, CT, USA. laura.niklason@yale.edu.
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