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A decontamination strategy for resolving SARS-CoV-2 amplicon contamination in a next-generation sequencing laboratory.

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Title: A decontamination strategy for resolving SARS-CoV-2 amplicon contamination in a next-generation sequencing laboratory.
Authors: Mwangi P; Next Generation Sequencing Unit and Division of Virology, Faculty of Health Sciences, University of the Free State, Bloemfontein, 9300, South Africa., Mogotsi M; Next Generation Sequencing Unit and Division of Virology, Faculty of Health Sciences, University of the Free State, Bloemfontein, 9300, South Africa., Ogunbayo A; Next Generation Sequencing Unit and Division of Virology, Faculty of Health Sciences, University of the Free State, Bloemfontein, 9300, South Africa., Mooko T; Next Generation Sequencing Unit and Division of Virology, Faculty of Health Sciences, University of the Free State, Bloemfontein, 9300, South Africa., Maringa W; Next Generation Sequencing Unit and Division of Virology, Faculty of Health Sciences, University of the Free State, Bloemfontein, 9300, South Africa., Sondlane H; Next Generation Sequencing Unit and Division of Virology, Faculty of Health Sciences, University of the Free State, Bloemfontein, 9300, South Africa., Nkwadipo K; Next Generation Sequencing Unit and Division of Virology, Faculty of Health Sciences, University of the Free State, Bloemfontein, 9300, South Africa., Adelabu O; Next Generation Sequencing Unit and Division of Virology, Faculty of Health Sciences, University of the Free State, Bloemfontein, 9300, South Africa., Bester PA; Division of Virology, National Health Laboratory Service and University of the Free State, Bloemfontein, South Africa., Goedhals D; Division of Virology, National Health Laboratory Service and University of the Free State, Bloemfontein, South Africa.; Pathcare Vermaak, Pretoria, 0157, South Africa., Nyaga M; Next Generation Sequencing Unit and Division of Virology, Faculty of Health Sciences, University of the Free State, Bloemfontein, 9300, South Africa. nyagamm@ufs.ac.za.
Source: Archives of virology [Arch Virol] 2022 Apr; Vol. 167 (4), pp. 1175-1179. Date of Electronic Publication: 2022 Mar 17.
Publication Type: Journal Article
Journal Info: Publisher: Springer-Verlag Country of Publication: Austria NLM ID: 7506870 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1432-8798 (Electronic) Linking ISSN: 03048608 NLM ISO Abbreviation: Arch Virol Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: <searchLink fieldCode="AU" term="%22Mwangi+P%22">Mwangi P</searchLink>; Next Generation Sequencing Unit and Division of Virology, Faculty of Health Sciences, University of the Free State, Bloemfontein, 9300, South Africa.<br /><searchLink fieldCode="AU" term="%22Mogotsi+M%22">Mogotsi M</searchLink>; Next Generation Sequencing Unit and Division of Virology, Faculty of Health Sciences, University of the Free State, Bloemfontein, 9300, South Africa.<br /><searchLink fieldCode="AU" term="%22Ogunbayo+A%22">Ogunbayo A</searchLink>; Next Generation Sequencing Unit and Division of Virology, Faculty of Health Sciences, University of the Free State, Bloemfontein, 9300, South Africa.<br /><searchLink fieldCode="AU" term="%22Mooko+T%22">Mooko T</searchLink>; Next Generation Sequencing Unit and Division of Virology, Faculty of Health Sciences, University of the Free State, Bloemfontein, 9300, South Africa.<br /><searchLink fieldCode="AU" term="%22Maringa+W%22">Maringa W</searchLink>; Next Generation Sequencing Unit and Division of Virology, Faculty of Health Sciences, University of the Free State, Bloemfontein, 9300, South Africa.<br /><searchLink fieldCode="AU" term="%22Sondlane+H%22">Sondlane H</searchLink>; Next Generation Sequencing Unit and Division of Virology, Faculty of Health Sciences, University of the Free State, Bloemfontein, 9300, South Africa.<br /><searchLink fieldCode="AU" term="%22Nkwadipo+K%22">Nkwadipo K</searchLink>; Next Generation Sequencing Unit and Division of Virology, Faculty of Health Sciences, University of the Free State, Bloemfontein, 9300, South Africa.<br /><searchLink fieldCode="AU" term="%22Adelabu+O%22">Adelabu O</searchLink>; Next Generation Sequencing Unit and Division of Virology, Faculty of Health Sciences, University of the Free State, Bloemfontein, 9300, South Africa.<br /><searchLink fieldCode="AU" term="%22Bester+PA%22">Bester PA</searchLink>; Division of Virology, National Health Laboratory Service and University of the Free State, Bloemfontein, South Africa.<br /><searchLink fieldCode="AU" term="%22Goedhals+D%22">Goedhals D</searchLink>; Division of Virology, National Health Laboratory Service and University of the Free State, Bloemfontein, South Africa.; Pathcare Vermaak, Pretoria, 0157, South Africa.<br /><searchLink fieldCode="AU" term="%22Nyaga+M%22">Nyaga M</searchLink>; Next Generation Sequencing Unit and Division of Virology, Faculty of Health Sciences, University of the Free State, Bloemfontein, 9300, South Africa. nyagamm@ufs.ac.za.
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