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DestVI identifies continuums of cell types in spatial transcriptomics data.

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Title: DestVI identifies continuums of cell types in spatial transcriptomics data.
Authors: Lopez R; Department of Electrical Engineering and Computer Sciences, University of California, Berkeley, Berkeley CA, USA., Li B; Department of Immunology, Weizmann Institute of Science, Rehovot, Israel., Keren-Shaul H; Department of Life Sciences Core Facilities, Weizmann Institute of Science, Rehovot, Israel., Boyeau P; Department of Electrical Engineering and Computer Sciences, University of California, Berkeley, Berkeley CA, USA., Kedmi M; Department of Life Sciences Core Facilities, Weizmann Institute of Science, Rehovot, Israel., Pilzer D; Department of Life Sciences Core Facilities, Weizmann Institute of Science, Rehovot, Israel., Jelinski A; Department of Immunology, Weizmann Institute of Science, Rehovot, Israel., Yofe I; Department of Immunology, Weizmann Institute of Science, Rehovot, Israel., David E; Department of Immunology, Weizmann Institute of Science, Rehovot, Israel., Wagner A; Department of Electrical Engineering and Computer Sciences, University of California, Berkeley, Berkeley CA, USA., Ergen C; Department of Electrical Engineering and Computer Sciences, University of California, Berkeley, Berkeley CA, USA., Addadi Y; Department of Life Sciences Core Facilities, Weizmann Institute of Science, Rehovot, Israel., Golani O; Department of Life Sciences Core Facilities, Weizmann Institute of Science, Rehovot, Israel., Ronchese F; Malaghan Institute of Medical Research, Wellington, New Zealand., Jordan MI; Department of Immunology, Weizmann Institute of Science, Rehovot, Israel.; Department of Statistics, University of California, Berkeley, Berkeley CA, USA., Amit I; Department of Immunology, Weizmann Institute of Science, Rehovot, Israel. ido.amit@weizmann.ac.il., Yosef N; Department of Electrical Engineering and Computer Sciences, University of California, Berkeley, Berkeley CA, USA. niryosef@berkeley.edu.; Center for Computational Biology, University of California, Berkeley, Berkeley CA, USA. niryosef@berkeley.edu.; Chan Zuckerberg Biohub, San Francisco CA, USA. niryosef@berkeley.edu.; Ragon Institute of MGH, MIT and Harvard, Cambridge MA, USA. niryosef@berkeley.edu.
Source: Nature biotechnology [Nat Biotechnol] 2022 Sep; Vol. 40 (9), pp. 1360-1369. Date of Electronic Publication: 2022 Apr 21.
Publication Type: Journal Article; Research Support, Non-U.S. Gov't; Research Support, N.I.H., Extramural
Journal Info: Publisher: Nature America Publishing Country of Publication: United States NLM ID: 9604648 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1546-1696 (Electronic) Linking ISSN: 10870156 NLM ISO Abbreviation: Nat Biotechnol Subsets: MEDLINE
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  Data: DestVI identifies continuums of cell types in spatial transcriptomics data.
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  Data: <searchLink fieldCode="AU" term="%22Lopez+R%22">Lopez R</searchLink>; Department of Electrical Engineering and Computer Sciences, University of California, Berkeley, Berkeley CA, USA.<br /><searchLink fieldCode="AU" term="%22Li+B%22">Li B</searchLink>; Department of Immunology, Weizmann Institute of Science, Rehovot, Israel.<br /><searchLink fieldCode="AU" term="%22Keren-Shaul+H%22">Keren-Shaul H</searchLink>; Department of Life Sciences Core Facilities, Weizmann Institute of Science, Rehovot, Israel.<br /><searchLink fieldCode="AU" term="%22Boyeau+P%22">Boyeau P</searchLink>; Department of Electrical Engineering and Computer Sciences, University of California, Berkeley, Berkeley CA, USA.<br /><searchLink fieldCode="AU" term="%22Kedmi+M%22">Kedmi M</searchLink>; Department of Life Sciences Core Facilities, Weizmann Institute of Science, Rehovot, Israel.<br /><searchLink fieldCode="AU" term="%22Pilzer+D%22">Pilzer D</searchLink>; Department of Life Sciences Core Facilities, Weizmann Institute of Science, Rehovot, Israel.<br /><searchLink fieldCode="AU" term="%22Jelinski+A%22">Jelinski A</searchLink>; Department of Immunology, Weizmann Institute of Science, Rehovot, Israel.<br /><searchLink fieldCode="AU" term="%22Yofe+I%22">Yofe I</searchLink>; Department of Immunology, Weizmann Institute of Science, Rehovot, Israel.<br /><searchLink fieldCode="AU" term="%22David+E%22">David E</searchLink>; Department of Immunology, Weizmann Institute of Science, Rehovot, Israel.<br /><searchLink fieldCode="AU" term="%22Wagner+A%22">Wagner A</searchLink>; Department of Electrical Engineering and Computer Sciences, University of California, Berkeley, Berkeley CA, USA.<br /><searchLink fieldCode="AU" term="%22Ergen+C%22">Ergen C</searchLink>; Department of Electrical Engineering and Computer Sciences, University of California, Berkeley, Berkeley CA, USA.<br /><searchLink fieldCode="AU" term="%22Addadi+Y%22">Addadi Y</searchLink>; Department of Life Sciences Core Facilities, Weizmann Institute of Science, Rehovot, Israel.<br /><searchLink fieldCode="AU" term="%22Golani+O%22">Golani O</searchLink>; Department of Life Sciences Core Facilities, Weizmann Institute of Science, Rehovot, Israel.<br /><searchLink fieldCode="AU" term="%22Ronchese+F%22">Ronchese F</searchLink>; Malaghan Institute of Medical Research, Wellington, New Zealand.<br /><searchLink fieldCode="AU" term="%22Jordan+MI%22">Jordan MI</searchLink>; Department of Immunology, Weizmann Institute of Science, Rehovot, Israel.; Department of Statistics, University of California, Berkeley, Berkeley CA, USA.<br /><searchLink fieldCode="AU" term="%22Amit+I%22">Amit I</searchLink>; Department of Immunology, Weizmann Institute of Science, Rehovot, Israel. ido.amit@weizmann.ac.il.<br /><searchLink fieldCode="AU" term="%22Yosef+N%22">Yosef N</searchLink>; Department of Electrical Engineering and Computer Sciences, University of California, Berkeley, Berkeley CA, USA. niryosef@berkeley.edu.; Center for Computational Biology, University of California, Berkeley, Berkeley CA, USA. niryosef@berkeley.edu.; Chan Zuckerberg Biohub, San Francisco CA, USA. niryosef@berkeley.edu.; Ragon Institute of MGH, MIT and Harvard, Cambridge MA, USA. niryosef@berkeley.edu.
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  Data: <searchLink fieldCode="JN" term="%229604648%22">Nature biotechnology</searchLink> [Nat Biotechnol] 2022 Sep; Vol. 40 (9), pp. 1360-1369. <i>Date of Electronic Publication: </i>2022 Apr 21.
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