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A pilot study to troubleshoot quality control metrics when assessing circulating miRNA expression data reproducibility across study sites.

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Title: A pilot study to troubleshoot quality control metrics when assessing circulating miRNA expression data reproducibility across study sites.
Authors: Permuth JB; Department of Cancer Epidemiology, H. Lee Moffitt Cancer Center and Research Institute, Tampa, FL, USA.; Department of Gastrointestinal Oncology, H. Lee Moffitt Cancer Center and Research Institute, Tampa, FL, USA., Mesa T; Molecular Genomics Core Facility, H. Lee Moffitt Cancer Center and Research Institute, Tampa, FL, USA., Williams SL; Oncogenomics Shared Resource, Sylvester Comprehensive Cancer Center, Miami, FL, USA., Cardentey Y; Oncogenomics Shared Resource, Sylvester Comprehensive Cancer Center, Miami, FL, USA., Zhang D; Department of Cancer Epidemiology, University of Florida, Gainesville, FL, USA., Pawlak EA; GeoMx DSP, Nanostring Technologies, Seattle, WA, USA., Li J; Department of Biostatistics and Bioinformatics, H. Lee Moffitt Cancer Center and Research Institute, Tampa, FL, USA., Cameron ME; College of Medicine, University of Florida, Gainesville, FL, USA., Ali KN; Department of Cancer Epidemiology, H. Lee Moffitt Cancer Center and Research Institute, Tampa, FL, USA., Jeong D; Department of Cancer Epidemiology, H. Lee Moffitt Cancer Center and Research Institute, Tampa, FL, USA.; Department of Diagnostic Imaging and Interventional Radiology, H. Lee Moffitt Cancer Tampa, FL, USA., Yoder SJ; Molecular Genomics Core Facility, H. Lee Moffitt Cancer Center and Research Institute, Tampa, FL, USA., Chen DT; Department of Biostatistics and Bioinformatics, H. Lee Moffitt Cancer Center and Research Institute, Tampa, FL, USA., Trevino JG; Department of Surgery, University of Florida, Gainesville, FL, USA.; Department of Surgery, Division of Surgical Oncology, Virginia Commonwealth University School of Medicine, Richmond, VA, USA., Merchant N; Department of Surgery, Sylvester Comprehensive Cancer Center, Miami, FL, USA., Malafa M; Department of Gastrointestinal Oncology, H. Lee Moffitt Cancer Center and Research Institute, Tampa, FL, USA.
Source: Cancer biomarkers : section A of Disease markers [Cancer Biomark] 2022; Vol. 33 (4), pp. 467-478.
Publication Type: Journal Article; Multicenter Study
Journal Info: Publisher: SAGE Publications Country of Publication: United States NLM ID: 101256509 Publication Model: Print Cited Medium: Internet ISSN: 1875-8592 (Electronic) Linking ISSN: 15740153 NLM ISO Abbreviation: Cancer Biomark Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: <searchLink fieldCode="AU" term="%22Permuth+JB%22">Permuth JB</searchLink>; Department of Cancer Epidemiology, H. Lee Moffitt Cancer Center and Research Institute, Tampa, FL, USA.; Department of Gastrointestinal Oncology, H. Lee Moffitt Cancer Center and Research Institute, Tampa, FL, USA.<br /><searchLink fieldCode="AU" term="%22Mesa+T%22">Mesa T</searchLink>; Molecular Genomics Core Facility, H. Lee Moffitt Cancer Center and Research Institute, Tampa, FL, USA.<br /><searchLink fieldCode="AU" term="%22Williams+SL%22">Williams SL</searchLink>; Oncogenomics Shared Resource, Sylvester Comprehensive Cancer Center, Miami, FL, USA.<br /><searchLink fieldCode="AU" term="%22Cardentey+Y%22">Cardentey Y</searchLink>; Oncogenomics Shared Resource, Sylvester Comprehensive Cancer Center, Miami, FL, USA.<br /><searchLink fieldCode="AU" term="%22Zhang+D%22">Zhang D</searchLink>; Department of Cancer Epidemiology, University of Florida, Gainesville, FL, USA.<br /><searchLink fieldCode="AU" term="%22Pawlak+EA%22">Pawlak EA</searchLink>; GeoMx DSP, Nanostring Technologies, Seattle, WA, USA.<br /><searchLink fieldCode="AU" term="%22Li+J%22">Li J</searchLink>; Department of Biostatistics and Bioinformatics, H. Lee Moffitt Cancer Center and Research Institute, Tampa, FL, USA.<br /><searchLink fieldCode="AU" term="%22Cameron+ME%22">Cameron ME</searchLink>; College of Medicine, University of Florida, Gainesville, FL, USA.<br /><searchLink fieldCode="AU" term="%22Ali+KN%22">Ali KN</searchLink>; Department of Cancer Epidemiology, H. Lee Moffitt Cancer Center and Research Institute, Tampa, FL, USA.<br /><searchLink fieldCode="AU" term="%22Jeong+D%22">Jeong D</searchLink>; Department of Cancer Epidemiology, H. Lee Moffitt Cancer Center and Research Institute, Tampa, FL, USA.; Department of Diagnostic Imaging and Interventional Radiology, H. Lee Moffitt Cancer Tampa, FL, USA.<br /><searchLink fieldCode="AU" term="%22Yoder+SJ%22">Yoder SJ</searchLink>; Molecular Genomics Core Facility, H. Lee Moffitt Cancer Center and Research Institute, Tampa, FL, USA.<br /><searchLink fieldCode="AU" term="%22Chen+DT%22">Chen DT</searchLink>; Department of Biostatistics and Bioinformatics, H. Lee Moffitt Cancer Center and Research Institute, Tampa, FL, USA.<br /><searchLink fieldCode="AU" term="%22Trevino+JG%22">Trevino JG</searchLink>; Department of Surgery, University of Florida, Gainesville, FL, USA.; Department of Surgery, Division of Surgical Oncology, Virginia Commonwealth University School of Medicine, Richmond, VA, USA.<br /><searchLink fieldCode="AU" term="%22Merchant+N%22">Merchant N</searchLink>; Department of Surgery, Sylvester Comprehensive Cancer Center, Miami, FL, USA.<br /><searchLink fieldCode="AU" term="%22Malafa+M%22">Malafa M</searchLink>; Department of Gastrointestinal Oncology, H. Lee Moffitt Cancer Center and Research Institute, Tampa, FL, USA.
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        Value: 10.3233/CBM-210255
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