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Phylogenetic and amino acid signature analysis of the SARS-CoV-2s lineages circulating in Tunisia.

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Title: Phylogenetic and amino acid signature analysis of the SARS-CoV-2s lineages circulating in Tunisia.
Authors: Sassi MB; National Center Chalbibelkahia of Pharmacovigilance of Tunis, Laboratory of Clinical Pharmacology, Boulevard 9 Dr Zouhier Essafi, Tunis 1006, Tunisia; University of Tunis El Manar, Faculty of Medicine of Tunis, LR16SP02, 1007 Tunis, Tunisia., Ferjani S; Charles Nicolle Hospital, Laboratory of Microbiology, Virology unit, National Influenza and other Respiratory Viruses Center-Tunisia, Boulevard 9 Avril, Tunis 1006, Tunisia; University of Tunis El Manar, Faculty of Medicine of Tunis, LR99ES09, 1007 Tunis, Tunisia. Electronic address: ferjsana@yahoo.fr., Mkada I; Department of Neurology, LR18SP03, Razi Universitary Hospital, 1 rue des orangers Manouba, 2010 Tunis, Tunisia; Clinical Investigation Centre (CIC) 'Neurosciences and Mental Health', Razi Universitary Hospital, 1 rue des orangers Manouba, 2010, Tunis, Tunisia., Arbi M; Laboratory of Bioinformatics, Biomathematics and Biostatistics-LR16IPT09, Institut Pasteur de Tunis, University of Tunis El Manar (UTM), Tunis, Tunisia., Safer M; Ministry of Health, National Observatory of New and Emerging Diseases, 1006 Tunis, Tunisia., Elmoussi A; Charles Nicolle Hospital, Laboratory of Microbiology, Virology unit, National Influenza and other Respiratory Viruses Center-Tunisia, Boulevard 9 Avril, Tunis 1006, Tunisia., Abid S; Charles Nicolle Hospital, Laboratory of Microbiology, Virology unit, National Influenza and other Respiratory Viruses Center-Tunisia, Boulevard 9 Avril, Tunis 1006, Tunisia., Souiai O; Laboratory of Bioinformatics, Biomathematics and Biostatistics-LR16IPT09, Institut Pasteur de Tunis, University of Tunis El Manar (UTM), Tunis, Tunisia., Gharbi A; Department of Neurology, LR18SP03, Razi Universitary Hospital, 1 rue des orangers Manouba, 2010 Tunis, Tunisia; Clinical Investigation Centre (CIC) 'Neurosciences and Mental Health', Razi Universitary Hospital, 1 rue des orangers Manouba, 2010, Tunis, Tunisia; Faculty of Medicine of Tunis, University of Tunis El Manar, 15, Rue DjebelAkhdhar - La Rabta - 1007, Tunis, Tunisia., Tejouri A; University of Tunis El Manar, Faculty of Medicine of Tunis, LR99ES10 Human Genetics Laboratory, 1007 Tunis, Tunisia., Gaies E; National Center Chalbibelkahia of Pharmacovigilance of Tunis, Laboratory of Clinical Pharmacology, Boulevard 9 Dr Zouhier Essafi, Tunis 1006, Tunisia; University of Tunis El Manar, Faculty of Medicine of Tunis, LR16SP02, 1007 Tunis, Tunisia., Eljabri H; National Center Chalbibelkahia of Pharmacovigilance of Tunis, Laboratory of Clinical Pharmacology, Boulevard 9 Dr Zouhier Essafi, Tunis 1006, Tunisia., Ayed S; Faculty of Medicine of Tunis, University of Tunis El Manar, 15, Rue DjebelAkhdhar - La Rabta - 1007, Tunis, Tunisia; Abderrahmen Mami Hospital, Department of Medical Intensive Care, 2080 Ariana, Tunisia., Hechaichi A; Ministry of Health, National Observatory of New and Emerging Diseases, 1006 Tunis, Tunisia., Daghfous R; National Center Chalbibelkahia of Pharmacovigilance of Tunis, Laboratory of Clinical Pharmacology, Boulevard 9 Dr Zouhier Essafi, Tunis 1006, Tunisia; University of Tunis El Manar, Faculty of Medicine of Tunis, LR16SP02, 1007 Tunis, Tunisia., Gouider R; Department of Neurology, LR18SP03, Razi Universitary Hospital, 1 rue des orangers Manouba, 2010 Tunis, Tunisia; Clinical Investigation Centre (CIC) 'Neurosciences and Mental Health', Razi Universitary Hospital, 1 rue des orangers Manouba, 2010, Tunis, Tunisia; Faculty of Medicine of Tunis, University of Tunis El Manar, 15, Rue DjebelAkhdhar - La Rabta - 1007, Tunis, Tunisia., Khelil JB; Faculty of Medicine of Tunis, University of Tunis El Manar, 15, Rue DjebelAkhdhar - La Rabta - 1007, Tunis, Tunisia; Abderrahmen Mami Hospital, Department of Medical Intensive Care, 2080 Ariana, Tunisia., Kharrat M; University of Tunis El Manar, Faculty of Medicine of Tunis, LR99ES10 Human Genetics Laboratory, 1007 Tunis, Tunisia., Kacem I; Department of Neurology, LR18SP03, Razi Universitary Hospital, 1 rue des orangers Manouba, 2010 Tunis, Tunisia; Clinical Investigation Centre (CIC) 'Neurosciences and Mental Health', Razi Universitary Hospital, 1 rue des orangers Manouba, 2010, Tunis, Tunisia; Faculty of Medicine of Tunis, University of Tunis El Manar, 15, Rue DjebelAkhdhar - La Rabta - 1007, Tunis, Tunisia., Alya NB; Ministry of Health, National Observatory of New and Emerging Diseases, 1006 Tunis, Tunisia., Benkahla A; Laboratory of Bioinformatics, Biomathematics and Biostatistics-LR16IPT09, Institut Pasteur de Tunis, University of Tunis El Manar (UTM), Tunis, Tunisia., Trabelsi S; National Center Chalbibelkahia of Pharmacovigilance of Tunis, Laboratory of Clinical Pharmacology, Boulevard 9 Dr Zouhier Essafi, Tunis 1006, Tunisia; University of Tunis El Manar, Faculty of Medicine of Tunis, LR16SP02, 1007 Tunis, Tunisia., Boubaker IB; Charles Nicolle Hospital, Laboratory of Microbiology, Virology unit, National Influenza and other Respiratory Viruses Center-Tunisia, Boulevard 9 Avril, Tunis 1006, Tunisia; University of Tunis El Manar, Faculty of Medicine of Tunis, LR99ES09, 1007 Tunis, Tunisia.
Source: Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases [Infect Genet Evol] 2022 Aug; Vol. 102, pp. 105300. Date of Electronic Publication: 2022 May 10.
Publication Type: Journal Article; Research Support, Non-U.S. Gov't
Journal Info: Publisher: Elsevier Science Country of Publication: Netherlands NLM ID: 101084138 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1567-7257 (Electronic) Linking ISSN: 15671348 NLM ISO Abbreviation: Infect Genet Evol Subsets: MEDLINE
Database: MEDLINE Ultimate
Description
ISSN:1567-7257
DOI:10.1016/j.meegid.2022.105300