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Co-infection with SARS-CoV-2 Omicron and Delta variants revealed by genomic surveillance.

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Title: Co-infection with SARS-CoV-2 Omicron and Delta variants revealed by genomic surveillance.
Authors: Rockett RJ; Sydney Institute for Infectious Diseases, University of Sydney, Sydney, NSW, Australia.; Centre for Infectious Diseases and Microbiology-Public Health, Westmead Hospital, Westmead, NSW, Australia., Draper J; Sydney Institute for Infectious Diseases, University of Sydney, Sydney, NSW, Australia.; Institute for Clinical Pathology and Medical Research, New South Wales Health Pathology, Westmead, NSW, Australia., Gall M; Sydney Institute for Infectious Diseases, University of Sydney, Sydney, NSW, Australia.; Institute for Clinical Pathology and Medical Research, New South Wales Health Pathology, Westmead, NSW, Australia., Sim EM; Sydney Institute for Infectious Diseases, University of Sydney, Sydney, NSW, Australia.; Centre for Infectious Diseases and Microbiology-Public Health, Westmead Hospital, Westmead, NSW, Australia.; Institute for Clinical Pathology and Medical Research, New South Wales Health Pathology, Westmead, NSW, Australia., Arnott A; Sydney Institute for Infectious Diseases, University of Sydney, Sydney, NSW, Australia.; Centre for Infectious Diseases and Microbiology-Public Health, Westmead Hospital, Westmead, NSW, Australia.; Institute for Clinical Pathology and Medical Research, New South Wales Health Pathology, Westmead, NSW, Australia., Agius JE; Sydney Institute for Infectious Diseases, University of Sydney, Sydney, NSW, Australia., Johnson-Mackinnon J; Sydney Institute for Infectious Diseases, University of Sydney, Sydney, NSW, Australia.; Centre for Infectious Diseases and Microbiology-Public Health, Westmead Hospital, Westmead, NSW, Australia., Fong W; Sydney Institute for Infectious Diseases, University of Sydney, Sydney, NSW, Australia.; Centre for Infectious Diseases and Microbiology-Public Health, Westmead Hospital, Westmead, NSW, Australia., Martinez E; Sydney Institute for Infectious Diseases, University of Sydney, Sydney, NSW, Australia.; Centre for Infectious Diseases and Microbiology-Public Health, Westmead Hospital, Westmead, NSW, Australia.; Institute for Clinical Pathology and Medical Research, New South Wales Health Pathology, Westmead, NSW, Australia., Drew AP; Institute for Clinical Pathology and Medical Research, New South Wales Health Pathology, Westmead, NSW, Australia., Lee C; Institute for Clinical Pathology and Medical Research, New South Wales Health Pathology, Westmead, NSW, Australia., Ngo C; Institute for Clinical Pathology and Medical Research, New South Wales Health Pathology, Westmead, NSW, Australia., Ramsperger M; Institute for Clinical Pathology and Medical Research, New South Wales Health Pathology, Westmead, NSW, Australia., Ginn AN; Sydney Institute for Infectious Diseases, University of Sydney, Sydney, NSW, Australia.; Institute for Clinical Pathology and Medical Research, New South Wales Health Pathology, Westmead, NSW, Australia., Wang Q; Sydney Institute for Infectious Diseases, University of Sydney, Sydney, NSW, Australia.; Centre for Infectious Diseases and Microbiology-Public Health, Westmead Hospital, Westmead, NSW, Australia.; Institute for Clinical Pathology and Medical Research, New South Wales Health Pathology, Westmead, NSW, Australia., Fennell M; Institute for Clinical Pathology and Medical Research, New South Wales Health Pathology, Westmead, NSW, Australia., Ko D; Institute for Clinical Pathology and Medical Research, New South Wales Health Pathology, Westmead, NSW, Australia., Hueston L; Institute for Clinical Pathology and Medical Research, New South Wales Health Pathology, Westmead, NSW, Australia., Kairaitis L; Renal Services Blacktown Hospital, Western Sydney Local Health District, Sydney, NSW, Australia., Holmes EC; Sydney Institute for Infectious Diseases, University of Sydney, Sydney, NSW, Australia.; School of Life and Environmental Sciences, University of Sydney, Sydney, NSW, Australia.; School of Medical Sciences, University of Sydney, Sydney, NSW, Australia., O'Sullivan MN; Sydney Institute for Infectious Diseases, University of Sydney, Sydney, NSW, Australia.; Centre for Infectious Diseases and Microbiology-Public Health, Westmead Hospital, Westmead, NSW, Australia.; Institute for Clinical Pathology and Medical Research, New South Wales Health Pathology, Westmead, NSW, Australia., Chen SC; Sydney Institute for Infectious Diseases, University of Sydney, Sydney, NSW, Australia.; Centre for Infectious Diseases and Microbiology-Public Health, Westmead Hospital, Westmead, NSW, Australia.; Institute for Clinical Pathology and Medical Research, New South Wales Health Pathology, Westmead, NSW, Australia., Kok J; Sydney Institute for Infectious Diseases, University of Sydney, Sydney, NSW, Australia.; Centre for Infectious Diseases and Microbiology-Public Health, Westmead Hospital, Westmead, NSW, Australia.; Institute for Clinical Pathology and Medical Research, New South Wales Health Pathology, Westmead, NSW, Australia., Dwyer DE; Sydney Institute for Infectious Diseases, University of Sydney, Sydney, NSW, Australia.; Centre for Infectious Diseases and Microbiology-Public Health, Westmead Hospital, Westmead, NSW, Australia.; Institute for Clinical Pathology and Medical Research, New South Wales Health Pathology, Westmead, NSW, Australia., Sintchenko V; Sydney Institute for Infectious Diseases, University of Sydney, Sydney, NSW, Australia. vitali.sintchenko@sydney.edu.au.; Centre for Infectious Diseases and Microbiology-Public Health, Westmead Hospital, Westmead, NSW, Australia. vitali.sintchenko@sydney.edu.au.; Institute for Clinical Pathology and Medical Research, New South Wales Health Pathology, Westmead, NSW, Australia. vitali.sintchenko@sydney.edu.au.; School of Medical Sciences, University of Sydney, Sydney, NSW, Australia. vitali.sintchenko@sydney.edu.au.
Source: Nature communications [Nat Commun] 2022 May 18; Vol. 13 (1), pp. 2745. Date of Electronic Publication: 2022 May 18.
Publication Type: Journal Article; Research Support, Non-U.S. Gov't
Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE
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  Data: Co-infection with SARS-CoV-2 Omicron and Delta variants revealed by genomic surveillance.
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  Data: <searchLink fieldCode="AU" term="%22Rockett+RJ%22">Rockett RJ</searchLink>; Sydney Institute for Infectious Diseases, University of Sydney, Sydney, NSW, Australia.; Centre for Infectious Diseases and Microbiology-Public Health, Westmead Hospital, Westmead, NSW, Australia.<br /><searchLink fieldCode="AU" term="%22Draper+J%22">Draper J</searchLink>; Sydney Institute for Infectious Diseases, University of Sydney, Sydney, NSW, Australia.; Institute for Clinical Pathology and Medical Research, New South Wales Health Pathology, Westmead, NSW, Australia.<br /><searchLink fieldCode="AU" term="%22Gall+M%22">Gall M</searchLink>; Sydney Institute for Infectious Diseases, University of Sydney, Sydney, NSW, Australia.; Institute for Clinical Pathology and Medical Research, New South Wales Health Pathology, Westmead, NSW, Australia.<br /><searchLink fieldCode="AU" term="%22Sim+EM%22">Sim EM</searchLink>; Sydney Institute for Infectious Diseases, University of Sydney, Sydney, NSW, Australia.; Centre for Infectious Diseases and Microbiology-Public Health, Westmead Hospital, Westmead, NSW, Australia.; Institute for Clinical Pathology and Medical Research, New South Wales Health Pathology, Westmead, NSW, Australia.<br /><searchLink fieldCode="AU" term="%22Arnott+A%22">Arnott A</searchLink>; Sydney Institute for Infectious Diseases, University of Sydney, Sydney, NSW, Australia.; Centre for Infectious Diseases and Microbiology-Public Health, Westmead Hospital, Westmead, NSW, Australia.; Institute for Clinical Pathology and Medical Research, New South Wales Health Pathology, Westmead, NSW, Australia.<br /><searchLink fieldCode="AU" term="%22Agius+JE%22">Agius JE</searchLink>; Sydney Institute for Infectious Diseases, University of Sydney, Sydney, NSW, Australia.<br /><searchLink fieldCode="AU" term="%22Johnson-Mackinnon+J%22">Johnson-Mackinnon J</searchLink>; Sydney Institute for Infectious Diseases, University of Sydney, Sydney, NSW, Australia.; Centre for Infectious Diseases and Microbiology-Public Health, Westmead Hospital, Westmead, NSW, Australia.<br /><searchLink fieldCode="AU" term="%22Fong+W%22">Fong W</searchLink>; Sydney Institute for Infectious Diseases, University of Sydney, Sydney, NSW, Australia.; Centre for Infectious Diseases and Microbiology-Public Health, Westmead Hospital, Westmead, NSW, Australia.<br /><searchLink fieldCode="AU" term="%22Martinez+E%22">Martinez E</searchLink>; Sydney Institute for Infectious Diseases, University of Sydney, Sydney, NSW, Australia.; Centre for Infectious Diseases and Microbiology-Public Health, Westmead Hospital, Westmead, NSW, Australia.; Institute for Clinical Pathology and Medical Research, New South Wales Health Pathology, Westmead, NSW, Australia.<br /><searchLink fieldCode="AU" term="%22Drew+AP%22">Drew AP</searchLink>; Institute for Clinical Pathology and Medical Research, New South Wales Health Pathology, Westmead, NSW, Australia.<br /><searchLink fieldCode="AU" term="%22Lee+C%22">Lee C</searchLink>; Institute for Clinical Pathology and Medical Research, New South Wales Health Pathology, Westmead, NSW, Australia.<br /><searchLink fieldCode="AU" term="%22Ngo+C%22">Ngo C</searchLink>; Institute for Clinical Pathology and Medical Research, New South Wales Health Pathology, Westmead, NSW, Australia.<br /><searchLink fieldCode="AU" term="%22Ramsperger+M%22">Ramsperger M</searchLink>; Institute for Clinical Pathology and Medical Research, New South Wales Health Pathology, Westmead, NSW, Australia.<br /><searchLink fieldCode="AU" term="%22Ginn+AN%22">Ginn AN</searchLink>; Sydney Institute for Infectious Diseases, University of Sydney, Sydney, NSW, Australia.; Institute for Clinical Pathology and Medical Research, New South Wales Health Pathology, Westmead, NSW, Australia.<br /><searchLink fieldCode="AU" term="%22Wang+Q%22">Wang Q</searchLink>; Sydney Institute for Infectious Diseases, University of Sydney, Sydney, NSW, Australia.; Centre for Infectious Diseases and Microbiology-Public Health, Westmead Hospital, Westmead, NSW, Australia.; Institute for Clinical Pathology and Medical Research, New South Wales Health Pathology, Westmead, NSW, Australia.<br /><searchLink fieldCode="AU" term="%22Fennell+M%22">Fennell M</searchLink>; Institute for Clinical Pathology and Medical Research, New South Wales Health Pathology, Westmead, NSW, Australia.<br /><searchLink fieldCode="AU" term="%22Ko+D%22">Ko D</searchLink>; Institute for Clinical Pathology and Medical Research, New South Wales Health Pathology, Westmead, NSW, Australia.<br /><searchLink fieldCode="AU" term="%22Hueston+L%22">Hueston L</searchLink>; Institute for Clinical Pathology and Medical Research, New South Wales Health Pathology, Westmead, NSW, Australia.<br /><searchLink fieldCode="AU" term="%22Kairaitis+L%22">Kairaitis L</searchLink>; Renal Services Blacktown Hospital, Western Sydney Local Health District, Sydney, NSW, Australia.<br /><searchLink fieldCode="AU" term="%22Holmes+EC%22">Holmes EC</searchLink>; Sydney Institute for Infectious Diseases, University of Sydney, Sydney, NSW, Australia.; School of Life and Environmental Sciences, University of Sydney, Sydney, NSW, Australia.; School of Medical Sciences, University of Sydney, Sydney, NSW, Australia.<br /><searchLink fieldCode="AU" term="%22O'Sullivan+MN%22">O'Sullivan MN</searchLink>; Sydney Institute for Infectious Diseases, University of Sydney, Sydney, NSW, Australia.; Centre for Infectious Diseases and Microbiology-Public Health, Westmead Hospital, Westmead, NSW, Australia.; Institute for Clinical Pathology and Medical Research, New South Wales Health Pathology, Westmead, NSW, Australia.<br /><searchLink fieldCode="AU" term="%22Chen+SC%22">Chen SC</searchLink>; Sydney Institute for Infectious Diseases, University of Sydney, Sydney, NSW, Australia.; Centre for Infectious Diseases and Microbiology-Public Health, Westmead Hospital, Westmead, NSW, Australia.; Institute for Clinical Pathology and Medical Research, New South Wales Health Pathology, Westmead, NSW, Australia.<br /><searchLink fieldCode="AU" term="%22Kok+J%22">Kok J</searchLink>; Sydney Institute for Infectious Diseases, University of Sydney, Sydney, NSW, Australia.; Centre for Infectious Diseases and Microbiology-Public Health, Westmead Hospital, Westmead, NSW, Australia.; Institute for Clinical Pathology and Medical Research, New South Wales Health Pathology, Westmead, NSW, Australia.<br /><searchLink fieldCode="AU" term="%22Dwyer+DE%22">Dwyer DE</searchLink>; Sydney Institute for Infectious Diseases, University of Sydney, Sydney, NSW, Australia.; Centre for Infectious Diseases and Microbiology-Public Health, Westmead Hospital, Westmead, NSW, Australia.; Institute for Clinical Pathology and Medical Research, New South Wales Health Pathology, Westmead, NSW, Australia.<br /><searchLink fieldCode="AU" term="%22Sintchenko+V%22">Sintchenko V</searchLink>; Sydney Institute for Infectious Diseases, University of Sydney, Sydney, NSW, Australia. vitali.sintchenko@sydney.edu.au.; Centre for Infectious Diseases and Microbiology-Public Health, Westmead Hospital, Westmead, NSW, Australia. vitali.sintchenko@sydney.edu.au.; Institute for Clinical Pathology and Medical Research, New South Wales Health Pathology, Westmead, NSW, Australia. vitali.sintchenko@sydney.edu.au.; School of Medical Sciences, University of Sydney, Sydney, NSW, Australia. vitali.sintchenko@sydney.edu.au.
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