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Development of a simple genotyping method based on indel mutations to rapidly screen SARS-CoV-2 circulating variants: Delta, Omicron BA.1 and BA.2.

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Title: Development of a simple genotyping method based on indel mutations to rapidly screen SARS-CoV-2 circulating variants: Delta, Omicron BA.1 and BA.2.
Authors: Ayadi W; Laboratory of Molecular Biotechnology of Eukaryotes, Center of Biotechnology of Sfax, University of Sfax, Sidi Mansour Street Km 6, BP 1177, 3038 Sfax, Tunisia. Electronic address: wajdi.ayadi.cbs@gmail.com., Taktak A; Laboratory of Molecular Biotechnology of Eukaryotes, Center of Biotechnology of Sfax, University of Sfax, Sidi Mansour Street Km 6, BP 1177, 3038 Sfax, Tunisia; Laboratory of Microbiology, Habib Bourguiba University-Hospital, Sfax, Tunisia., Gargouri S; Laboratory of Microbiology, Habib Bourguiba University-Hospital, Sfax, Tunisia; Faculty of Medicine, University of Sfax, Sfax, Tunisia., Smaoui F; Laboratory of Microbiology, Habib Bourguiba University-Hospital, Sfax, Tunisia., Chtourou A; Laboratory of Microbiology, Habib Bourguiba University-Hospital, Sfax, Tunisia; Faculty of Medicine, University of Sfax, Sfax, Tunisia., Skouri-Gargouri H; Laboratory of Molecular Biotechnology of Eukaryotes, Center of Biotechnology of Sfax, University of Sfax, Sidi Mansour Street Km 6, BP 1177, 3038 Sfax, Tunisia., Derbel R; Laboratory of Microbiology, Habib Bourguiba University-Hospital, Sfax, Tunisia., Sassi AH; Laboratory of Molecular Biotechnology of Eukaryotes, Center of Biotechnology of Sfax, University of Sfax, Sidi Mansour Street Km 6, BP 1177, 3038 Sfax, Tunisia., Gargouri A; Laboratory of Molecular Biotechnology of Eukaryotes, Center of Biotechnology of Sfax, University of Sfax, Sidi Mansour Street Km 6, BP 1177, 3038 Sfax, Tunisia., Hammami A; Laboratory of Microbiology, Habib Bourguiba University-Hospital, Sfax, Tunisia; Faculty of Medicine, University of Sfax, Sfax, Tunisia., Karray-Hakim H; Laboratory of Microbiology, Habib Bourguiba University-Hospital, Sfax, Tunisia; Faculty of Medicine, University of Sfax, Sfax, Tunisia., Mokdad-Gargouri R; Laboratory of Molecular Biotechnology of Eukaryotes, Center of Biotechnology of Sfax, University of Sfax, Sidi Mansour Street Km 6, BP 1177, 3038 Sfax, Tunisia., Fki-Berrajah L; Laboratory of Microbiology, Habib Bourguiba University-Hospital, Sfax, Tunisia; Faculty of Medicine, University of Sfax, Sfax, Tunisia.
Source: Journal of virological methods [J Virol Methods] 2022 Sep; Vol. 307, pp. 114570. Date of Electronic Publication: 2022 Jun 18.
Publication Type: Journal Article; Research Support, Non-U.S. Gov't
Journal Info: Publisher: Elsevier/North-Holland Biomedical Press Country of Publication: Netherlands NLM ID: 8005839 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1879-0984 (Electronic) Linking ISSN: 01660934 NLM ISO Abbreviation: J Virol Methods Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: Development of a simple genotyping method based on indel mutations to rapidly screen SARS-CoV-2 circulating variants: Delta, Omicron BA.1 and BA.2.
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  Data: <searchLink fieldCode="AU" term="%22Ayadi+W%22">Ayadi W</searchLink>; Laboratory of Molecular Biotechnology of Eukaryotes, Center of Biotechnology of Sfax, University of Sfax, Sidi Mansour Street Km 6, BP 1177, 3038 Sfax, Tunisia. Electronic address: wajdi.ayadi.cbs@gmail.com.<br /><searchLink fieldCode="AU" term="%22Taktak+A%22">Taktak A</searchLink>; Laboratory of Molecular Biotechnology of Eukaryotes, Center of Biotechnology of Sfax, University of Sfax, Sidi Mansour Street Km 6, BP 1177, 3038 Sfax, Tunisia; Laboratory of Microbiology, Habib Bourguiba University-Hospital, Sfax, Tunisia.<br /><searchLink fieldCode="AU" term="%22Gargouri+S%22">Gargouri S</searchLink>; Laboratory of Microbiology, Habib Bourguiba University-Hospital, Sfax, Tunisia; Faculty of Medicine, University of Sfax, Sfax, Tunisia.<br /><searchLink fieldCode="AU" term="%22Smaoui+F%22">Smaoui F</searchLink>; Laboratory of Microbiology, Habib Bourguiba University-Hospital, Sfax, Tunisia.<br /><searchLink fieldCode="AU" term="%22Chtourou+A%22">Chtourou A</searchLink>; Laboratory of Microbiology, Habib Bourguiba University-Hospital, Sfax, Tunisia; Faculty of Medicine, University of Sfax, Sfax, Tunisia.<br /><searchLink fieldCode="AU" term="%22Skouri-Gargouri+H%22">Skouri-Gargouri H</searchLink>; Laboratory of Molecular Biotechnology of Eukaryotes, Center of Biotechnology of Sfax, University of Sfax, Sidi Mansour Street Km 6, BP 1177, 3038 Sfax, Tunisia.<br /><searchLink fieldCode="AU" term="%22Derbel+R%22">Derbel R</searchLink>; Laboratory of Microbiology, Habib Bourguiba University-Hospital, Sfax, Tunisia.<br /><searchLink fieldCode="AU" term="%22Sassi+AH%22">Sassi AH</searchLink>; Laboratory of Molecular Biotechnology of Eukaryotes, Center of Biotechnology of Sfax, University of Sfax, Sidi Mansour Street Km 6, BP 1177, 3038 Sfax, Tunisia.<br /><searchLink fieldCode="AU" term="%22Gargouri+A%22">Gargouri A</searchLink>; Laboratory of Molecular Biotechnology of Eukaryotes, Center of Biotechnology of Sfax, University of Sfax, Sidi Mansour Street Km 6, BP 1177, 3038 Sfax, Tunisia.<br /><searchLink fieldCode="AU" term="%22Hammami+A%22">Hammami A</searchLink>; Laboratory of Microbiology, Habib Bourguiba University-Hospital, Sfax, Tunisia; Faculty of Medicine, University of Sfax, Sfax, Tunisia.<br /><searchLink fieldCode="AU" term="%22Karray-Hakim+H%22">Karray-Hakim H</searchLink>; Laboratory of Microbiology, Habib Bourguiba University-Hospital, Sfax, Tunisia; Faculty of Medicine, University of Sfax, Sfax, Tunisia.<br /><searchLink fieldCode="AU" term="%22Mokdad-Gargouri+R%22">Mokdad-Gargouri R</searchLink>; Laboratory of Molecular Biotechnology of Eukaryotes, Center of Biotechnology of Sfax, University of Sfax, Sidi Mansour Street Km 6, BP 1177, 3038 Sfax, Tunisia.<br /><searchLink fieldCode="AU" term="%22Fki-Berrajah+L%22">Fki-Berrajah L</searchLink>; Laboratory of Microbiology, Habib Bourguiba University-Hospital, Sfax, Tunisia; Faculty of Medicine, University of Sfax, Sfax, Tunisia.
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      – TitleFull: Development of a simple genotyping method based on indel mutations to rapidly screen SARS-CoV-2 circulating variants: Delta, Omicron BA.1 and BA.2.
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