View in EDS PDF Full Text

Effectiveness of rapid SARS-CoV-2 genome sequencing in supporting infection control for hospital-onset COVID-19 infection: Multicentre, prospective study.

Saved in:
Bibliographic Details
Title: Effectiveness of rapid SARS-CoV-2 genome sequencing in supporting infection control for hospital-onset COVID-19 infection: Multicentre, prospective study.
Authors: Stirrup O; Institute for Global Health, University College London, London, United Kingdom., Blackstone J; The Comprehensive Clinical Trials Unit, University College London, London, United Kingdom., Mapp F; Institute for Global Health, University College London, London, United Kingdom., MacNeil A; The Comprehensive Clinical Trials Unit, University College London, London, United Kingdom., Panca M; The Comprehensive Clinical Trials Unit, University College London, London, United Kingdom., Holmes A; Imperial College Healthcare NHS Trust, London, United Kingdom., Machin N; Manchester University NHS Foundation Trust, Manchester, United Kingdom., Shin GY; University College London Hospitals NHS Foundation Trust, London, United Kingdom., Mahungu T; Royal Free London NHS Foundation Trust, London, United Kingdom., Saeed K; University Hospital Southampton NHS Foundation Trust, Southampton, United Kingdom., Saluja T; Sandwell & West Birmingham Hospitals NHS Trust, Birmingham, United Kingdom., Taha Y; Department of Virology and Infectious Diseases, Newcastle-upon-Tyne Hospitals NHS Foundation Trust, Newcastle, United Kingdom., Mahida N; Nottingham University Hospitals NHS Trust, Nottingham, United Kingdom., Pope C; St George's University Hospitals NHS Foundation Trust, London, United Kingdom., Chawla A; Liverpool University Hospitals NHS Foundation Trust, Liverpool, United Kingdom., Cutino-Moguel MT; Barts Health NHS Trust, London, United Kingdom., Tamuri A; Research Computing, University College London, London, United Kingdom., Williams R; Department of Genetics and Genomic Medicine, UCL Great Ormond Street Institute of Child Health, University College London, London, United Kingdom., Darby A; Centre for Genomic Research, University of Liverpool, Liverpool, United Kingdom., Robertson DL; MRC-University of Glasgow Centre For Virus Research, University of Glasgow, Glasgow, United Kingdom., Flaviani F; Guy's and St Thomas' Hospital NHS Foundation Trust, London, United Kingdom., Nastouli E; University College London Hospitals NHS Foundation Trust, London, United Kingdom., Robson S; Centre for Enzyme Innovation and School of Pharmacy and Biomedical Science, University of Portsmouth, Portsmouth, United Kingdom., Smith D; Department of Applied Sciences, Northumbria University, Newcastle-upon-Tyne, United Kingdom., Loose M; School of Life Sciences, University of Nottingham, Nottingham, United Kingdom., Laing K; Institute for Infection and Immunity, St George's University of London, London, United Kingdom., Monahan I; Institute for Infection and Immunity, St George's University of London, London, United Kingdom., Kele B; Barts Health NHS Trust, London, United Kingdom., Haldenby S; Centre for Genomic Research, University of Liverpool, Liverpool, United Kingdom., George R; Manchester University NHS Foundation Trust, Manchester, United Kingdom., Bashton M; The Hub for Biotechnology in the Built Environment, Department of Applied Sciences, Northumbria University, Newcastle, United Kingdom., Witney AA; Institute for Infection and Immunity, St George's University of London, London, United Kingdom., Byott M; University College London Hospitals NHS Foundation Trust, London, United Kingdom., Coll F; Department of Infection Biology, Faculty of Infectious and Tropical Diseases, London School of Hygiene & Tropical Medicine, London, United Kingdom., Chapman M; Health Data Research UK Cambridge Hub, Cambridge, United Kingdom., Peacock SJ; Department of Medicine, University of Cambridge, Cambridge, United Kingdom., Hughes J; MRC-University of Glasgow Centre For Virus Research, University of Glasgow, Glasgow, United Kingdom., Nebbia G; Guy's and St Thomas' Hospital NHS Foundation Trust, London, United Kingdom., Partridge DG; Sheffield Teaching Hospitals NHS Foundation Trust, Sheffield, United Kingdom., Parker M; Sheffield Bioinformatics Core, University of Sheffield, Sheffield, United Kingdom., Price JR; Imperial College Healthcare NHS Trust, London, United Kingdom., Peters C; NHS Greater Glasgow and Clyde, Glasgow, United Kingdom., Roy S; Department of Infection, Immunity and Inflammation, UCL Great Ormond Street Institute of Child Health, University College London, London, United Kingdom., Snell LB; Guy's and St Thomas' Hospital NHS Foundation Trust, London, United Kingdom., de Silva TI; Department of Infection, Immunity and Cardiovascular Disease, University of Sheffield, Sheffield, United Kingdom., Thomson E; MRC-University of Glasgow Centre For Virus Research, University of Glasgow, Glasgow, United Kingdom., Flowers P; School of Psychological Sciences and Health, University of Strathclyde, Glasgow, United Kingdom., Copas A; Institute for Global Health, University College London, London, United Kingdom., Breuer J; Department of Infection, Immunity and Inflammation, UCL Great Ormond Street Institute of Child Health, University College London, London, United Kingdom.
Corporate Authors: COG-UK HOCI Investigators, COVID-19 Genomics UK (COG-UK) consortium
Source: ELife [Elife] 2022 Sep 13; Vol. 11. Date of Electronic Publication: 2022 Sep 13.
Publication Type: Multicenter Study; Journal Article; Research Support, Non-U.S. Gov't
Journal Info: Publisher: eLife Sciences Publications, Ltd Country of Publication: England NLM ID: 101579614 Publication Model: Electronic Cited Medium: Internet ISSN: 2050-084X (Electronic) Linking ISSN: 2050084X NLM ISO Abbreviation: Elife Subsets: MEDLINE
Database: MEDLINE Ultimate
FullText Links:
  – Type: pdflink
Text:
  Availability: 0
Header DbId: mdl
DbLabel: MEDLINE Ultimate
An: 36098502
AccessLevel: 2
PubType: Academic Journal
PubTypeId: academicJournal
PreciseRelevancyScore: 0
IllustrationInfo
Items – Name: Title
  Label: Title
  Group: Ti
  Data: Effectiveness of rapid SARS-CoV-2 genome sequencing in supporting infection control for hospital-onset COVID-19 infection: Multicentre, prospective study.
– Name: Author
  Label: Authors
  Group: Au
  Data: <searchLink fieldCode="AU" term="%22Stirrup+O%22">Stirrup O</searchLink>; Institute for Global Health, University College London, London, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Blackstone+J%22">Blackstone J</searchLink>; The Comprehensive Clinical Trials Unit, University College London, London, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Mapp+F%22">Mapp F</searchLink>; Institute for Global Health, University College London, London, United Kingdom.<br /><searchLink fieldCode="AU" term="%22MacNeil+A%22">MacNeil A</searchLink>; The Comprehensive Clinical Trials Unit, University College London, London, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Panca+M%22">Panca M</searchLink>; The Comprehensive Clinical Trials Unit, University College London, London, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Holmes+A%22">Holmes A</searchLink>; Imperial College Healthcare NHS Trust, London, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Machin+N%22">Machin N</searchLink>; Manchester University NHS Foundation Trust, Manchester, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Shin+GY%22">Shin GY</searchLink>; University College London Hospitals NHS Foundation Trust, London, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Mahungu+T%22">Mahungu T</searchLink>; Royal Free London NHS Foundation Trust, London, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Saeed+K%22">Saeed K</searchLink>; University Hospital Southampton NHS Foundation Trust, Southampton, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Saluja+T%22">Saluja T</searchLink>; Sandwell & West Birmingham Hospitals NHS Trust, Birmingham, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Taha+Y%22">Taha Y</searchLink>; Department of Virology and Infectious Diseases, Newcastle-upon-Tyne Hospitals NHS Foundation Trust, Newcastle, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Mahida+N%22">Mahida N</searchLink>; Nottingham University Hospitals NHS Trust, Nottingham, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Pope+C%22">Pope C</searchLink>; St George's University Hospitals NHS Foundation Trust, London, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Chawla+A%22">Chawla A</searchLink>; Liverpool University Hospitals NHS Foundation Trust, Liverpool, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Cutino-Moguel+MT%22">Cutino-Moguel MT</searchLink>; Barts Health NHS Trust, London, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Tamuri+A%22">Tamuri A</searchLink>; Research Computing, University College London, London, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Williams+R%22">Williams R</searchLink>; Department of Genetics and Genomic Medicine, UCL Great Ormond Street Institute of Child Health, University College London, London, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Darby+A%22">Darby A</searchLink>; Centre for Genomic Research, University of Liverpool, Liverpool, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Robertson+DL%22">Robertson DL</searchLink>; MRC-University of Glasgow Centre For Virus Research, University of Glasgow, Glasgow, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Flaviani+F%22">Flaviani F</searchLink>; Guy's and St Thomas' Hospital NHS Foundation Trust, London, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Nastouli+E%22">Nastouli E</searchLink>; University College London Hospitals NHS Foundation Trust, London, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Robson+S%22">Robson S</searchLink>; Centre for Enzyme Innovation and School of Pharmacy and Biomedical Science, University of Portsmouth, Portsmouth, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Smith+D%22">Smith D</searchLink>; Department of Applied Sciences, Northumbria University, Newcastle-upon-Tyne, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Loose+M%22">Loose M</searchLink>; School of Life Sciences, University of Nottingham, Nottingham, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Laing+K%22">Laing K</searchLink>; Institute for Infection and Immunity, St George's University of London, London, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Monahan+I%22">Monahan I</searchLink>; Institute for Infection and Immunity, St George's University of London, London, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Kele+B%22">Kele B</searchLink>; Barts Health NHS Trust, London, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Haldenby+S%22">Haldenby S</searchLink>; Centre for Genomic Research, University of Liverpool, Liverpool, United Kingdom.<br /><searchLink fieldCode="AU" term="%22George+R%22">George R</searchLink>; Manchester University NHS Foundation Trust, Manchester, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Bashton+M%22">Bashton M</searchLink>; The Hub for Biotechnology in the Built Environment, Department of Applied Sciences, Northumbria University, Newcastle, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Witney+AA%22">Witney AA</searchLink>; Institute for Infection and Immunity, St George's University of London, London, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Byott+M%22">Byott M</searchLink>; University College London Hospitals NHS Foundation Trust, London, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Coll+F%22">Coll F</searchLink>; Department of Infection Biology, Faculty of Infectious and Tropical Diseases, London School of Hygiene & Tropical Medicine, London, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Chapman+M%22">Chapman M</searchLink>; Health Data Research UK Cambridge Hub, Cambridge, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Peacock+SJ%22">Peacock SJ</searchLink>; Department of Medicine, University of Cambridge, Cambridge, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Hughes+J%22">Hughes J</searchLink>; MRC-University of Glasgow Centre For Virus Research, University of Glasgow, Glasgow, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Nebbia+G%22">Nebbia G</searchLink>; Guy's and St Thomas' Hospital NHS Foundation Trust, London, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Partridge+DG%22">Partridge DG</searchLink>; Sheffield Teaching Hospitals NHS Foundation Trust, Sheffield, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Parker+M%22">Parker M</searchLink>; Sheffield Bioinformatics Core, University of Sheffield, Sheffield, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Price+JR%22">Price JR</searchLink>; Imperial College Healthcare NHS Trust, London, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Peters+C%22">Peters C</searchLink>; NHS Greater Glasgow and Clyde, Glasgow, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Roy+S%22">Roy S</searchLink>; Department of Infection, Immunity and Inflammation, UCL Great Ormond Street Institute of Child Health, University College London, London, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Snell+LB%22">Snell LB</searchLink>; Guy's and St Thomas' Hospital NHS Foundation Trust, London, United Kingdom.<br /><searchLink fieldCode="AU" term="%22de+Silva+TI%22">de Silva TI</searchLink>; Department of Infection, Immunity and Cardiovascular Disease, University of Sheffield, Sheffield, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Thomson+E%22">Thomson E</searchLink>; MRC-University of Glasgow Centre For Virus Research, University of Glasgow, Glasgow, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Flowers+P%22">Flowers P</searchLink>; School of Psychological Sciences and Health, University of Strathclyde, Glasgow, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Copas+A%22">Copas A</searchLink>; Institute for Global Health, University College London, London, United Kingdom.<br /><searchLink fieldCode="AU" term="%22Breuer+J%22">Breuer J</searchLink>; Department of Infection, Immunity and Inflammation, UCL Great Ormond Street Institute of Child Health, University College London, London, United Kingdom.
– Name: AuthorCorporate
  Label: Corporate Authors
  Group: Au
  Data: <searchLink fieldCode="CA" term="%22COG-UK+HOCI+Investigators%22">COG-UK HOCI Investigators</searchLink><br /><searchLink fieldCode="CA" term="%22COVID-19+Genomics+UK+%28COG-UK%29+consortium%22">COVID-19 Genomics UK (COG-UK) consortium</searchLink>
– Name: TitleSource
  Label: Source
  Group: Src
  Data: <searchLink fieldCode="JN" term="%22101579614%22">ELife</searchLink> [Elife] 2022 Sep 13; Vol. 11. <i>Date of Electronic Publication: </i>2022 Sep 13.
– Name: TypePub
  Label: Publication Type
  Group: TypPub
  Data: Multicenter Study; Journal Article; Research Support, Non-U.S. Gov't
– Name: TitleSource
  Label: Journal Info
  Group: Src
  Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22eLife+Sciences+Publications%2C+Ltd%22">eLife Sciences Publications, Ltd </searchLink><i>Country of Publication: </i>England <i>NLM ID: </i>101579614 <i>Publication Model: </i>Electronic <i>Cited Medium: </i>Internet <i>ISSN: </i>2050-084X (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%222050084X%22">2050084X </searchLink><i>NLM ISO Abbreviation: </i>Elife <i>Subsets: </i>MEDLINE
PLink https://search.ebscohost.com/login.aspx?direct=true&site=eds-live&db=mdl&AN=36098502
RecordInfo BibRecord:
  BibEntity:
    Identifiers:
      – Type: doi
        Value: 10.7554/eLife.78427
    Languages:
      – Code: eng
        Text: English
    Titles:
      – TitleFull: Effectiveness of rapid SARS-CoV-2 genome sequencing in supporting infection control for hospital-onset COVID-19 infection: Multicentre, prospective study.
        Type: main
  BibRelationships:
    HasContributorRelationships:
      – PersonEntity:
          Name:
            NameFull: Stirrup O
      – PersonEntity:
          Name:
            NameFull: Blackstone J
      – PersonEntity:
          Name:
            NameFull: Mapp F
      – PersonEntity:
          Name:
            NameFull: MacNeil A
      – PersonEntity:
          Name:
            NameFull: Panca M
      – PersonEntity:
          Name:
            NameFull: Holmes A
      – PersonEntity:
          Name:
            NameFull: Machin N
      – PersonEntity:
          Name:
            NameFull: Shin GY
      – PersonEntity:
          Name:
            NameFull: Mahungu T
      – PersonEntity:
          Name:
            NameFull: Saeed K
      – PersonEntity:
          Name:
            NameFull: Saluja T
      – PersonEntity:
          Name:
            NameFull: Taha Y
      – PersonEntity:
          Name:
            NameFull: Mahida N
      – PersonEntity:
          Name:
            NameFull: Pope C
      – PersonEntity:
          Name:
            NameFull: Chawla A
      – PersonEntity:
          Name:
            NameFull: Cutino-Moguel MT
      – PersonEntity:
          Name:
            NameFull: Tamuri A
      – PersonEntity:
          Name:
            NameFull: Williams R
      – PersonEntity:
          Name:
            NameFull: Darby A
      – PersonEntity:
          Name:
            NameFull: Robertson DL
      – PersonEntity:
          Name:
            NameFull: Flaviani F
      – PersonEntity:
          Name:
            NameFull: Nastouli E
      – PersonEntity:
          Name:
            NameFull: Robson S
      – PersonEntity:
          Name:
            NameFull: Smith D
      – PersonEntity:
          Name:
            NameFull: Loose M
      – PersonEntity:
          Name:
            NameFull: Laing K
      – PersonEntity:
          Name:
            NameFull: Monahan I
      – PersonEntity:
          Name:
            NameFull: Kele B
      – PersonEntity:
          Name:
            NameFull: Haldenby S
      – PersonEntity:
          Name:
            NameFull: George R
      – PersonEntity:
          Name:
            NameFull: Bashton M
      – PersonEntity:
          Name:
            NameFull: Witney AA
      – PersonEntity:
          Name:
            NameFull: Byott M
      – PersonEntity:
          Name:
            NameFull: Coll F
      – PersonEntity:
          Name:
            NameFull: Chapman M
      – PersonEntity:
          Name:
            NameFull: Peacock SJ
      – PersonEntity:
          Name:
            NameFull: Hughes J
      – PersonEntity:
          Name:
            NameFull: Nebbia G
      – PersonEntity:
          Name:
            NameFull: Partridge DG
      – PersonEntity:
          Name:
            NameFull: Parker M
      – PersonEntity:
          Name:
            NameFull: Price JR
      – PersonEntity:
          Name:
            NameFull: Peters C
      – PersonEntity:
          Name:
            NameFull: Roy S
      – PersonEntity:
          Name:
            NameFull: Snell LB
      – PersonEntity:
          Name:
            NameFull: de Silva TI
      – PersonEntity:
          Name:
            NameFull: Thomson E
      – PersonEntity:
          Name:
            NameFull: Flowers P
      – PersonEntity:
          Name:
            NameFull: Copas A
      – PersonEntity:
          Name:
            NameFull: Breuer J
    IsPartOfRelationships:
      – BibEntity:
          Dates:
            – D: 13
              M: 09
              Text: 2022 Sep 13
              Type: published
              Y: 2022
          Identifiers:
            – Type: issn-electronic
              Value: 2050-084X
          Numbering:
            – Type: volume
              Value: 11
          Titles:
            – TitleFull: ELife
              Type: main
ResultId 1