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Towards increased accuracy and reproducibility in SARS-CoV-2 next generation sequence analysis for public health surveillance.

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Title: Towards increased accuracy and reproducibility in SARS-CoV-2 next generation sequence analysis for public health surveillance.
Authors: Connor R; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA., Yarmosh DA; American Type Culture Collection, 10807 University Blvd, Manassas, VA 20110, USA.; BEI Resources., Maier W; Galaxy Europe Team, University of Freiburg, Freiburg, Germany., Shakya M; Bioscience Division, Los Alamos National Laboratory, Los Alamos, NM 87545 USA., Martin R; Clinical Virology Department, Gilead Sciences, 333 Lakeside Dr, Foster City, CA 94404, USA., Bradford R; American Type Culture Collection, 10807 University Blvd, Manassas, VA 20110, USA.; BEI Resources., Brister JR; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA., Chain PS; Bioscience Division, Los Alamos National Laboratory, Los Alamos, NM 87545 USA., Copeland CA; Deloitte Consulting LLP, 1919 North Lynn St, Suite 1500, Rosslyn, VA 22209 USA., di Iulio J; Vir Biotechnology Inc., San Francisco, CA, USA., Hu B; Bioscience Division, Los Alamos National Laboratory, Los Alamos, NM 87545 USA., Ebert P; Eli Lilly and Company, Indianapolis, IN., Gunti J; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA., Jin Y; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA., Katz KS; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA., Kochergin A; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA., LaRosa T; Deloitte Consulting LLP, 1919 North Lynn St, Suite 1500, Rosslyn, VA 22209 USA., Li J; Clinical Virology Department, Gilead Sciences, 333 Lakeside Dr, Foster City, CA 94404, USA., Li PE; Bioscience Division, Los Alamos National Laboratory, Los Alamos, NM 87545 USA., Lo CC; Bioscience Division, Los Alamos National Laboratory, Los Alamos, NM 87545 USA., Rashid S; American Type Culture Collection, 10807 University Blvd, Manassas, VA 20110, USA., Maiorova ES; Clinical Virology Department, Gilead Sciences, 333 Lakeside Dr, Foster City, CA 94404, USA., Xiao C; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA., Zalunin V; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA., Pruitt KD; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA.
Source: BioRxiv : the preprint server for biology [bioRxiv] 2022 Nov 03. Date of Electronic Publication: 2022 Nov 03.
Publication Type: Preprint; Journal Article
Journal Info: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE
Database: MEDLINE Ultimate
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PubType: Academic Journal
PubTypeId: academicJournal
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  Data: Towards increased accuracy and reproducibility in SARS-CoV-2 next generation sequence analysis for public health surveillance.
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  Data: <searchLink fieldCode="AU" term="%22Connor+R%22">Connor R</searchLink>; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA.<br /><searchLink fieldCode="AU" term="%22Yarmosh+DA%22">Yarmosh DA</searchLink>; American Type Culture Collection, 10807 University Blvd, Manassas, VA 20110, USA.; BEI Resources.<br /><searchLink fieldCode="AU" term="%22Maier+W%22">Maier W</searchLink>; Galaxy Europe Team, University of Freiburg, Freiburg, Germany.<br /><searchLink fieldCode="AU" term="%22Shakya+M%22">Shakya M</searchLink>; Bioscience Division, Los Alamos National Laboratory, Los Alamos, NM 87545 USA.<br /><searchLink fieldCode="AU" term="%22Martin+R%22">Martin R</searchLink>; Clinical Virology Department, Gilead Sciences, 333 Lakeside Dr, Foster City, CA 94404, USA.<br /><searchLink fieldCode="AU" term="%22Bradford+R%22">Bradford R</searchLink>; American Type Culture Collection, 10807 University Blvd, Manassas, VA 20110, USA.; BEI Resources.<br /><searchLink fieldCode="AU" term="%22Brister+JR%22">Brister JR</searchLink>; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA.<br /><searchLink fieldCode="AU" term="%22Chain+PS%22">Chain PS</searchLink>; Bioscience Division, Los Alamos National Laboratory, Los Alamos, NM 87545 USA.<br /><searchLink fieldCode="AU" term="%22Copeland+CA%22">Copeland CA</searchLink>; Deloitte Consulting LLP, 1919 North Lynn St, Suite 1500, Rosslyn, VA 22209 USA.<br /><searchLink fieldCode="AU" term="%22di+Iulio+J%22">di Iulio J</searchLink>; Vir Biotechnology Inc., San Francisco, CA, USA.<br /><searchLink fieldCode="AU" term="%22Hu+B%22">Hu B</searchLink>; Bioscience Division, Los Alamos National Laboratory, Los Alamos, NM 87545 USA.<br /><searchLink fieldCode="AU" term="%22Ebert+P%22">Ebert P</searchLink>; Eli Lilly and Company, Indianapolis, IN.<br /><searchLink fieldCode="AU" term="%22Gunti+J%22">Gunti J</searchLink>; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA.<br /><searchLink fieldCode="AU" term="%22Jin+Y%22">Jin Y</searchLink>; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA.<br /><searchLink fieldCode="AU" term="%22Katz+KS%22">Katz KS</searchLink>; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA.<br /><searchLink fieldCode="AU" term="%22Kochergin+A%22">Kochergin A</searchLink>; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA.<br /><searchLink fieldCode="AU" term="%22LaRosa+T%22">LaRosa T</searchLink>; Deloitte Consulting LLP, 1919 North Lynn St, Suite 1500, Rosslyn, VA 22209 USA.<br /><searchLink fieldCode="AU" term="%22Li+J%22">Li J</searchLink>; Clinical Virology Department, Gilead Sciences, 333 Lakeside Dr, Foster City, CA 94404, USA.<br /><searchLink fieldCode="AU" term="%22Li+PE%22">Li PE</searchLink>; Bioscience Division, Los Alamos National Laboratory, Los Alamos, NM 87545 USA.<br /><searchLink fieldCode="AU" term="%22Lo+CC%22">Lo CC</searchLink>; Bioscience Division, Los Alamos National Laboratory, Los Alamos, NM 87545 USA.<br /><searchLink fieldCode="AU" term="%22Rashid+S%22">Rashid S</searchLink>; American Type Culture Collection, 10807 University Blvd, Manassas, VA 20110, USA.<br /><searchLink fieldCode="AU" term="%22Maiorova+ES%22">Maiorova ES</searchLink>; Clinical Virology Department, Gilead Sciences, 333 Lakeside Dr, Foster City, CA 94404, USA.<br /><searchLink fieldCode="AU" term="%22Xiao+C%22">Xiao C</searchLink>; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA.<br /><searchLink fieldCode="AU" term="%22Zalunin+V%22">Zalunin V</searchLink>; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA.<br /><searchLink fieldCode="AU" term="%22Pruitt+KD%22">Pruitt KD</searchLink>; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA.
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  Data: <searchLink fieldCode="JN" term="%22101680187%22">BioRxiv : the preprint server for biology</searchLink> [bioRxiv] 2022 Nov 03. <i>Date of Electronic Publication: </i>2022 Nov 03.
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