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A transformer-based deep-learning approach for classifying brain metastases into primary organ sites using clinical whole-brain MRI images.

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Title: A transformer-based deep-learning approach for classifying brain metastases into primary organ sites using clinical whole-brain MRI images.
Authors: Lyu Q; Department of Biomedical Engineering, Rensselaer Polytechnic Institute, Troy, NY, USA., Namjoshi SV; Comprehensive Cancer Center, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Cancer Biology, Wake Forest School of Medicine, Winston-Salem, NC, USA., McTyre E; Brain Tumor Center of Excellence, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Radiology Informatics & Image Processing Laboratory, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Radiation Oncology, Wake Forest School of Medicine, Winston-Salem, NC, USA., Topaloglu U; Comprehensive Cancer Center, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Cancer Biology, Wake Forest School of Medicine, Winston-Salem, NC, USA., Barcus R; Radiology Informatics & Image Processing Laboratory, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Radiology, Wake Forest School of Medicine, Winston-Salem, NC, USA., Chan MD; Comprehensive Cancer Center, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Brain Tumor Center of Excellence, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Radiation Oncology, Wake Forest School of Medicine, Winston-Salem, NC, USA., Cramer CK; Comprehensive Cancer Center, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Brain Tumor Center of Excellence, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Radiation Oncology, Wake Forest School of Medicine, Winston-Salem, NC, USA., Debinski W; Comprehensive Cancer Center, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Cancer Biology, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Brain Tumor Center of Excellence, Wake Forest School of Medicine, Winston-Salem, NC, USA., Gurcan MN; Comprehensive Cancer Center, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Internal Medicine, Wake Forest School of Medicine, Winston-Salem, NC, USA., Lesser GJ; Comprehensive Cancer Center, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Brain Tumor Center of Excellence, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Internal Medicine, Wake Forest School of Medicine, Winston-Salem, NC, USA., Lin HK; Comprehensive Cancer Center, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Cancer Biology, Wake Forest School of Medicine, Winston-Salem, NC, USA., Munden RF; Comprehensive Cancer Center, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Radiology, Wake Forest School of Medicine, Winston-Salem, NC, USA., Pasche BC; Comprehensive Cancer Center, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Cancer Biology, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Brain Tumor Center of Excellence, Wake Forest School of Medicine, Winston-Salem, NC, USA., Sai KKS; Comprehensive Cancer Center, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Brain Tumor Center of Excellence, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Radiology Informatics & Image Processing Laboratory, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Radiology, Wake Forest School of Medicine, Winston-Salem, NC, USA., Strowd RE; Comprehensive Cancer Center, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Brain Tumor Center of Excellence, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Internal Medicine, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Neurology, Wake Forest School of Medicine, Winston-Salem, NC, USA., Tatter SB; Comprehensive Cancer Center, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Brain Tumor Center of Excellence, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Radiation Oncology, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Neurosurgery, Wake Forest School of Medicine, Winston-Salem, NC, USA., Watabe K; Comprehensive Cancer Center, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Cancer Biology, Wake Forest School of Medicine, Winston-Salem, NC, USA., Zhang W; Comprehensive Cancer Center, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Cancer Biology, Wake Forest School of Medicine, Winston-Salem, NC, USA., Wang G; Department of Biomedical Engineering, Rensselaer Polytechnic Institute, Troy, NY, USA., Whitlow CT; Comprehensive Cancer Center, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Brain Tumor Center of Excellence, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Radiology Informatics & Image Processing Laboratory, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Radiation Oncology, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Radiology, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Neurosurgery, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Neurology, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Biomedical Engineering, Wake Forest School of Medicine, Winston-Salem, NC, USA.
Source: Patterns (New York, N.Y.) [Patterns (N Y)] 2022 Oct 27; Vol. 3 (11), pp. 100613. Date of Electronic Publication: 2022 Oct 27 (Print Publication: 2022).
Publication Type: Journal Article
Journal Info: Publisher: Elsevier Inc Country of Publication: United States NLM ID: 101767765 Publication Model: eCollection Cited Medium: Internet ISSN: 2666-3899 (Electronic) Linking ISSN: 26663899 NLM ISO Abbreviation: Patterns (N Y) Subsets: PubMed not MEDLINE
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  Data: A transformer-based deep-learning approach for classifying brain metastases into primary organ sites using clinical whole-brain MRI images.
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  Data: <searchLink fieldCode="AU" term="%22Lyu+Q%22">Lyu Q</searchLink>; Department of Biomedical Engineering, Rensselaer Polytechnic Institute, Troy, NY, USA.<br /><searchLink fieldCode="AU" term="%22Namjoshi+SV%22">Namjoshi SV</searchLink>; Comprehensive Cancer Center, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Cancer Biology, Wake Forest School of Medicine, Winston-Salem, NC, USA.<br /><searchLink fieldCode="AU" term="%22McTyre+E%22">McTyre E</searchLink>; Brain Tumor Center of Excellence, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Radiology Informatics & Image Processing Laboratory, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Radiation Oncology, Wake Forest School of Medicine, Winston-Salem, NC, USA.<br /><searchLink fieldCode="AU" term="%22Topaloglu+U%22">Topaloglu U</searchLink>; Comprehensive Cancer Center, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Cancer Biology, Wake Forest School of Medicine, Winston-Salem, NC, USA.<br /><searchLink fieldCode="AU" term="%22Barcus+R%22">Barcus R</searchLink>; Radiology Informatics & Image Processing Laboratory, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Radiology, Wake Forest School of Medicine, Winston-Salem, NC, USA.<br /><searchLink fieldCode="AU" term="%22Chan+MD%22">Chan MD</searchLink>; Comprehensive Cancer Center, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Brain Tumor Center of Excellence, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Radiation Oncology, Wake Forest School of Medicine, Winston-Salem, NC, USA.<br /><searchLink fieldCode="AU" term="%22Cramer+CK%22">Cramer CK</searchLink>; Comprehensive Cancer Center, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Brain Tumor Center of Excellence, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Radiation Oncology, Wake Forest School of Medicine, Winston-Salem, NC, USA.<br /><searchLink fieldCode="AU" term="%22Debinski+W%22">Debinski W</searchLink>; Comprehensive Cancer Center, Wake Forest School of Medicine, Winston-Salem, NC, USA.; 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Comprehensive Cancer Center, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Radiology, Wake Forest School of Medicine, Winston-Salem, NC, USA.<br /><searchLink fieldCode="AU" term="%22Pasche+BC%22">Pasche BC</searchLink>; Comprehensive Cancer Center, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Cancer Biology, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Brain Tumor Center of Excellence, Wake Forest School of Medicine, Winston-Salem, NC, USA.<br /><searchLink fieldCode="AU" term="%22Sai+KKS%22">Sai KKS</searchLink>; Comprehensive Cancer Center, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Brain Tumor Center of Excellence, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Radiology Informatics & Image Processing Laboratory, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Radiology, Wake Forest School of Medicine, Winston-Salem, NC, USA.<br /><searchLink fieldCode="AU" term="%22Strowd+RE%22">Strowd RE</searchLink>; Comprehensive Cancer Center, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Brain Tumor Center of Excellence, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Internal Medicine, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Neurology, Wake Forest School of Medicine, Winston-Salem, NC, USA.<br /><searchLink fieldCode="AU" term="%22Tatter+SB%22">Tatter SB</searchLink>; Comprehensive Cancer Center, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Brain Tumor Center of Excellence, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Radiation Oncology, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Neurosurgery, Wake Forest School of Medicine, Winston-Salem, NC, USA.<br /><searchLink fieldCode="AU" term="%22Watabe+K%22">Watabe K</searchLink>; Comprehensive Cancer Center, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Cancer Biology, Wake Forest School of Medicine, Winston-Salem, NC, USA.<br /><searchLink fieldCode="AU" term="%22Zhang+W%22">Zhang W</searchLink>; Comprehensive Cancer Center, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Cancer Biology, Wake Forest School of Medicine, Winston-Salem, NC, USA.<br /><searchLink fieldCode="AU" term="%22Wang+G%22">Wang G</searchLink>; Department of Biomedical Engineering, Rensselaer Polytechnic Institute, Troy, NY, USA.<br /><searchLink fieldCode="AU" term="%22Whitlow+CT%22">Whitlow CT</searchLink>; Comprehensive Cancer Center, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Brain Tumor Center of Excellence, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Radiology Informatics & Image Processing Laboratory, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Radiation Oncology, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Radiology, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Neurosurgery, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Neurology, Wake Forest School of Medicine, Winston-Salem, NC, USA.; Department of Biomedical Engineering, Wake Forest School of Medicine, Winston-Salem, NC, USA.
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