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Antisense-oligonucleotide-mediated perturbation of long non-coding RNA reveals functional features in stem cells and across cell types.

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Title: Antisense-oligonucleotide-mediated perturbation of long non-coding RNA reveals functional features in stem cells and across cell types.
Authors: Yip CW; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan., Hon CC; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan., Yasuzawa K; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan., Sivaraman DM; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan; Sree Chitra Tirunal Institute for Medical Sciences and Technology, Thiruvananthapuram, Kerala 695 011, India., Ramilowski JA; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan; Advanced Medical Research Center, Yokohama City University, Yokohama, Kanagawa 236-0004, Japan., Shibayama Y; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan., Agrawal S; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan., Prabhu AV; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan., Parr C; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan., Severin J; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan., Lan YJ; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan., Dostie J; Department of Biochemistry, Rosalind and Morris Goodman Cancer Research Center, McGill University, Montréal, QC, Canada., Petri A; Center for RNA Medicine, Department of Clinical Medicine, Aalborg University, Copenhagen 2450, Denmark., Nishiyori-Sueki H; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan., Tagami M; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan., Itoh M; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan., López-Redondo F; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan., Kouno T; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan., Chang JC; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan., Luginbühl J; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan., Kato M; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan., Murata M; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan., Yip WH; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan., Shu X; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan; Department of Computational Biology and Medical Sciences, The University of Tokyo, Kashiwa, Chiba, 277-8562, Japan., Abugessaisa I; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan., Hasegawa A; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan., Suzuki H; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan., Kauppinen S; Center for RNA Medicine, Department of Clinical Medicine, Aalborg University, Copenhagen 2450, Denmark., Yagi K; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan., Okazaki Y; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan., Kasukawa T; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan., de Hoon M; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan., Carninci P; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan; Human Technopole, via Rita Levi Montalcini 1, Milan, Italy., Shin JW; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan; Genome Institute of Singapore, Agency for Science, Technology and Research, Singapore 138672, Singapore. Electronic address: jay.shin@riken.jp.
Source: Cell reports [Cell Rep] 2022 Dec 27; Vol. 41 (13), pp. 111893.
Publication Type: Journal Article; Research Support, Non-U.S. Gov't
Journal Info: Publisher: Cell Press Country of Publication: United States NLM ID: 101573691 Publication Model: Print Cited Medium: Internet ISSN: 2211-1247 (Electronic) NLM ISO Abbreviation: Cell Rep Subsets: MEDLINE
Database: MEDLINE Ultimate
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PubType: Academic Journal
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Items – Name: Title
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  Data: Antisense-oligonucleotide-mediated perturbation of long non-coding RNA reveals functional features in stem cells and across cell types.
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  Data: <searchLink fieldCode="AU" term="%22Yip+CW%22">Yip CW</searchLink>; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan.<br /><searchLink fieldCode="AU" term="%22Hon+CC%22">Hon CC</searchLink>; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan.<br /><searchLink fieldCode="AU" term="%22Yasuzawa+K%22">Yasuzawa K</searchLink>; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan.<br /><searchLink fieldCode="AU" term="%22Sivaraman+DM%22">Sivaraman DM</searchLink>; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan; Sree Chitra Tirunal Institute for Medical Sciences and Technology, Thiruvananthapuram, Kerala 695 011, India.<br /><searchLink fieldCode="AU" term="%22Ramilowski+JA%22">Ramilowski JA</searchLink>; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan; Advanced Medical Research Center, Yokohama City University, Yokohama, Kanagawa 236-0004, Japan.<br /><searchLink fieldCode="AU" term="%22Shibayama+Y%22">Shibayama Y</searchLink>; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan.<br /><searchLink fieldCode="AU" term="%22Agrawal+S%22">Agrawal S</searchLink>; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan.<br /><searchLink fieldCode="AU" term="%22Prabhu+AV%22">Prabhu AV</searchLink>; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan.<br /><searchLink fieldCode="AU" term="%22Parr+C%22">Parr C</searchLink>; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan.<br /><searchLink fieldCode="AU" term="%22Severin+J%22">Severin J</searchLink>; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan.<br /><searchLink fieldCode="AU" term="%22Lan+YJ%22">Lan YJ</searchLink>; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan.<br /><searchLink fieldCode="AU" term="%22Dostie+J%22">Dostie J</searchLink>; Department of Biochemistry, Rosalind and Morris Goodman Cancer Research Center, McGill University, Montréal, QC, Canada.<br /><searchLink fieldCode="AU" term="%22Petri+A%22">Petri A</searchLink>; Center for RNA Medicine, Department of Clinical Medicine, Aalborg University, Copenhagen 2450, Denmark.<br /><searchLink fieldCode="AU" term="%22Nishiyori-Sueki+H%22">Nishiyori-Sueki H</searchLink>; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan.<br /><searchLink fieldCode="AU" term="%22Tagami+M%22">Tagami M</searchLink>; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan.<br /><searchLink fieldCode="AU" term="%22Itoh+M%22">Itoh M</searchLink>; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan.<br /><searchLink fieldCode="AU" term="%22López-Redondo+F%22">López-Redondo F</searchLink>; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan.<br /><searchLink fieldCode="AU" term="%22Kouno+T%22">Kouno T</searchLink>; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan.<br /><searchLink fieldCode="AU" term="%22Chang+JC%22">Chang JC</searchLink>; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan.<br /><searchLink fieldCode="AU" term="%22Luginbühl+J%22">Luginbühl J</searchLink>; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan.<br /><searchLink fieldCode="AU" term="%22Kato+M%22">Kato M</searchLink>; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan.<br /><searchLink fieldCode="AU" term="%22Murata+M%22">Murata M</searchLink>; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan.<br /><searchLink fieldCode="AU" term="%22Yip+WH%22">Yip WH</searchLink>; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan.<br /><searchLink fieldCode="AU" term="%22Shu+X%22">Shu X</searchLink>; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan; Department of Computational Biology and Medical Sciences, The University of Tokyo, Kashiwa, Chiba, 277-8562, Japan.<br /><searchLink fieldCode="AU" term="%22Abugessaisa+I%22">Abugessaisa I</searchLink>; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan.<br /><searchLink fieldCode="AU" term="%22Hasegawa+A%22">Hasegawa A</searchLink>; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan.<br /><searchLink fieldCode="AU" term="%22Suzuki+H%22">Suzuki H</searchLink>; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan.<br /><searchLink fieldCode="AU" term="%22Kauppinen+S%22">Kauppinen S</searchLink>; Center for RNA Medicine, Department of Clinical Medicine, Aalborg University, Copenhagen 2450, Denmark.<br /><searchLink fieldCode="AU" term="%22Yagi+K%22">Yagi K</searchLink>; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan.<br /><searchLink fieldCode="AU" term="%22Okazaki+Y%22">Okazaki Y</searchLink>; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan.<br /><searchLink fieldCode="AU" term="%22Kasukawa+T%22">Kasukawa T</searchLink>; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan.<br /><searchLink fieldCode="AU" term="%22de+Hoon+M%22">de Hoon M</searchLink>; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan.<br /><searchLink fieldCode="AU" term="%22Carninci+P%22">Carninci P</searchLink>; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan; Human Technopole, via Rita Levi Montalcini 1, Milan, Italy.<br /><searchLink fieldCode="AU" term="%22Shin+JW%22">Shin JW</searchLink>; RIKEN Center for Integrative Medical Sciences, Yokohama, Kanagawa 230-0045, Japan; Genome Institute of Singapore, Agency for Science, Technology and Research, Singapore 138672, Singapore. Electronic address: jay.shin@riken.jp.
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  Data: <searchLink fieldCode="JN" term="%22101573691%22">Cell reports</searchLink> [Cell Rep] 2022 Dec 27; Vol. 41 (13), pp. 111893.
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