Integrative analysis of multimodal mass spectrometry data in MZmine 3.
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| Title: | Integrative analysis of multimodal mass spectrometry data in MZmine 3. |
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| Authors: | Schmid R; Collaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, CA, USA.; Institute of Inorganic and Analytical Chemistry, University of Münster, Münster, Germany.; Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Prague, Czech Republic., Heuckeroth S; Institute of Inorganic and Analytical Chemistry, University of Münster, Münster, Germany., Korf A; Institute of Inorganic and Analytical Chemistry, University of Münster, Münster, Germany., Smirnov A; Department of Bioinformatics and Genomics, University of North Carolina at Charlotte, Charlotte, NC, USA., Myers O; Department of Bioinformatics and Genomics, University of North Carolina at Charlotte, Charlotte, NC, USA., Dyrlund TS; Steno Diabetes Center Copenhagen, Gentofte, Denmark., Bushuiev R; Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Prague, Czech Republic., Murray KJ; Department of Biochemistry, Molecular Biology, and Biophysics, University of Minnesota - Twin Cities, Minneapolis, MN, USA., Hoffmann N; Institute for Bio- and Geosciences (IBG-5), Forschungszentrum Jülich GmbH, Jülich, Germany., Lu M; School of Engineering, Westlake University, Hangzhou, China., Sarvepalli A; BlockLab, Center for Large Datasystems Research, San Diego Supercomputer Center, La Jolla, CA, USA., Zhang Z; Collaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, CA, USA., Fleischauer M; Chair for Bioinformatics, Friedrich Schiller University Jena, Jena, Germany., Dührkop K; Chair for Bioinformatics, Friedrich Schiller University Jena, Jena, Germany., Wesner M; Institute of Inorganic and Analytical Chemistry, University of Münster, Münster, Germany., Hoogstra SJ; Agriculture and Agri-Food Canada, London Research and Development Centre, London, Ontario, Canada., Rudt E; Institute of Inorganic and Analytical Chemistry, University of Münster, Münster, Germany., Mokshyna O; Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Prague, Czech Republic., Brungs C; Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Prague, Czech Republic., Ponomarov K; Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Prague, Czech Republic., Mutabdžija L; Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Prague, Czech Republic., Damiani T; Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Prague, Czech Republic., Pudney CJ; Datacraft Technologies, Mosman Park, Washington, Western Australia, Australia., Earll M; Analytical Solutions Group, Product Technology and Engineering, Jealott's Hill International Research Centre, Bracknell, UK., Helmer PO; Institute of Inorganic and Analytical Chemistry, University of Münster, Münster, Germany., Fallon TR; Center for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California San Diego, La Jolla, CA, USA., Schulze T; Department of Effect-Directed Analysis, Helmholtz Centre for Environmental Research - UFZ, Leipzig, Germany., Rivas-Ubach A; Ecology and Forest Genetics, Institute of Forest Sciences (ICIFOR-INIA-CSIC), Madrid, Spain., Bilbao A; Earth and Biological Sciences Directorate, Pacific Northwest National Laboratory, Richland, WA, USA., Richter H; Clinic for Diagnostic Imaging, Diagnostic Imaging Research Unit (DIRU), University of Zurich, Zürich, Switzerland., Nothias LF; School of Pharmaceutical Sciences, University of Geneva, Geneva, Switzerland., Wang M; Department of Computer Science, University of California Riverside, Riverside, CA, USA., Orešič M; School of Medical Sciences, Örebro University, Örebro, Sweden.; Turku Bioscience Centre, University of Turku and Åbo Akademi University, Turku, Finland., Weng JK; Whitehead Institute for Biomedical Research, Cambridge, MA, USA.; Department of Biology, Massachusetts Institute of Technology, Cambridge, MA, USA., Böcker S; Chair for Bioinformatics, Friedrich Schiller University Jena, Jena, Germany., Jeibmann A; Institute of Neuropathology, University Hospital Münster, Münster, Germany., Hayen H; Institute of Inorganic and Analytical Chemistry, University of Münster, Münster, Germany., Karst U; Institute of Inorganic and Analytical Chemistry, University of Münster, Münster, Germany., Dorrestein PC; Collaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, CA, USA., Petras D; CMFI Cluster of Excellence, University of Tuebingen, Tuebingen, Germany., Du X; Department of Bioinformatics and Genomics, University of North Carolina at Charlotte, Charlotte, NC, USA., Pluskal T; Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Prague, Czech Republic. tomas.pluskal@uochb.cas.cz. |
| Source: | Nature biotechnology [Nat Biotechnol] 2023 Apr; Vol. 41 (4), pp. 447-449. |
| Publication Type: | Letter |
| Journal Info: | Publisher: Nature America Publishing Country of Publication: United States NLM ID: 9604648 Publication Model: Print Cited Medium: Internet ISSN: 1546-1696 (Electronic) Linking ISSN: 10870156 NLM ISO Abbreviation: Nat Biotechnol Subsets: MEDLINE |
| Database: | MEDLINE Ultimate |
| FullText | Text: Availability: 0 |
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| Header | DbId: mdl DbLabel: MEDLINE Ultimate An: 36859716 AccessLevel: 2 PubType: Editorial & Opinion PubTypeId: editorialOpinion PreciseRelevancyScore: 0 |
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| Items | – Name: Title Label: Title Group: Ti Data: Integrative analysis of multimodal mass spectrometry data in MZmine 3. – Name: Author Label: Authors Group: Au Data: <searchLink fieldCode="AU" term="%22Schmid+R%22">Schmid R</searchLink>; Collaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, CA, USA.; Institute of Inorganic and Analytical Chemistry, University of Münster, Münster, Germany.; Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Prague, Czech Republic.<br /><searchLink fieldCode="AU" term="%22Heuckeroth+S%22">Heuckeroth S</searchLink>; Institute of Inorganic and Analytical Chemistry, University of Münster, Münster, Germany.<br /><searchLink fieldCode="AU" term="%22Korf+A%22">Korf A</searchLink>; Institute of Inorganic and Analytical Chemistry, University of Münster, Münster, Germany.<br /><searchLink fieldCode="AU" term="%22Smirnov+A%22">Smirnov A</searchLink>; Department of Bioinformatics and Genomics, University of North Carolina at Charlotte, Charlotte, NC, USA.<br /><searchLink fieldCode="AU" term="%22Myers+O%22">Myers O</searchLink>; Department of Bioinformatics and Genomics, University of North Carolina at Charlotte, Charlotte, NC, USA.<br /><searchLink fieldCode="AU" term="%22Dyrlund+TS%22">Dyrlund TS</searchLink>; Steno Diabetes Center Copenhagen, Gentofte, Denmark.<br /><searchLink fieldCode="AU" term="%22Bushuiev+R%22">Bushuiev R</searchLink>; Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Prague, Czech Republic.<br /><searchLink fieldCode="AU" term="%22Murray+KJ%22">Murray KJ</searchLink>; Department of Biochemistry, Molecular Biology, and Biophysics, University of Minnesota - Twin Cities, Minneapolis, MN, USA.<br /><searchLink fieldCode="AU" term="%22Hoffmann+N%22">Hoffmann N</searchLink>; Institute for Bio- and Geosciences (IBG-5), Forschungszentrum Jülich GmbH, Jülich, Germany.<br /><searchLink fieldCode="AU" term="%22Lu+M%22">Lu M</searchLink>; School of Engineering, Westlake University, Hangzhou, China.<br /><searchLink fieldCode="AU" term="%22Sarvepalli+A%22">Sarvepalli A</searchLink>; BlockLab, Center for Large Datasystems Research, San Diego Supercomputer Center, La Jolla, CA, USA.<br /><searchLink fieldCode="AU" term="%22Zhang+Z%22">Zhang Z</searchLink>; Collaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, CA, USA.<br /><searchLink fieldCode="AU" term="%22Fleischauer+M%22">Fleischauer M</searchLink>; Chair for Bioinformatics, Friedrich Schiller University Jena, Jena, Germany.<br /><searchLink fieldCode="AU" term="%22Dührkop+K%22">Dührkop K</searchLink>; Chair for Bioinformatics, Friedrich Schiller University Jena, Jena, Germany.<br /><searchLink fieldCode="AU" term="%22Wesner+M%22">Wesner M</searchLink>; Institute of Inorganic and Analytical Chemistry, University of Münster, Münster, Germany.<br /><searchLink fieldCode="AU" term="%22Hoogstra+SJ%22">Hoogstra SJ</searchLink>; Agriculture and Agri-Food Canada, London Research and Development Centre, London, Ontario, Canada.<br /><searchLink fieldCode="AU" term="%22Rudt+E%22">Rudt E</searchLink>; Institute of Inorganic and Analytical Chemistry, University of Münster, Münster, Germany.<br /><searchLink fieldCode="AU" term="%22Mokshyna+O%22">Mokshyna O</searchLink>; Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Prague, Czech Republic.<br /><searchLink fieldCode="AU" term="%22Brungs+C%22">Brungs C</searchLink>; Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Prague, Czech Republic.<br /><searchLink fieldCode="AU" term="%22Ponomarov+K%22">Ponomarov K</searchLink>; Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Prague, Czech Republic.<br /><searchLink fieldCode="AU" term="%22Mutabdžija+L%22">Mutabdžija L</searchLink>; Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Prague, Czech Republic.<br /><searchLink fieldCode="AU" term="%22Damiani+T%22">Damiani T</searchLink>; Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Prague, Czech Republic.<br /><searchLink fieldCode="AU" term="%22Pudney+CJ%22">Pudney CJ</searchLink>; Datacraft Technologies, Mosman Park, Washington, Western Australia, Australia.<br /><searchLink fieldCode="AU" term="%22Earll+M%22">Earll M</searchLink>; Analytical Solutions Group, Product Technology and Engineering, Jealott's Hill International Research Centre, Bracknell, UK.<br /><searchLink fieldCode="AU" term="%22Helmer+PO%22">Helmer PO</searchLink>; Institute of Inorganic and Analytical Chemistry, University of Münster, Münster, Germany.<br /><searchLink fieldCode="AU" term="%22Fallon+TR%22">Fallon TR</searchLink>; Center for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California San Diego, La Jolla, CA, USA.<br /><searchLink fieldCode="AU" term="%22Schulze+T%22">Schulze T</searchLink>; Department of Effect-Directed Analysis, Helmholtz Centre for Environmental Research - UFZ, Leipzig, Germany.<br /><searchLink fieldCode="AU" term="%22Rivas-Ubach+A%22">Rivas-Ubach A</searchLink>; Ecology and Forest Genetics, Institute of Forest Sciences (ICIFOR-INIA-CSIC), Madrid, Spain.<br /><searchLink fieldCode="AU" term="%22Bilbao+A%22">Bilbao A</searchLink>; Earth and Biological Sciences Directorate, Pacific Northwest National Laboratory, Richland, WA, USA.<br /><searchLink fieldCode="AU" term="%22Richter+H%22">Richter H</searchLink>; Clinic for Diagnostic Imaging, Diagnostic Imaging Research Unit (DIRU), University of Zurich, Zürich, Switzerland.<br /><searchLink fieldCode="AU" term="%22Nothias+LF%22">Nothias LF</searchLink>; School of Pharmaceutical Sciences, University of Geneva, Geneva, Switzerland.<br /><searchLink fieldCode="AU" term="%22Wang+M%22">Wang M</searchLink>; Department of Computer Science, University of California Riverside, Riverside, CA, USA.<br /><searchLink fieldCode="AU" term="%22Orešič+M%22">Orešič M</searchLink>; School of Medical Sciences, Örebro University, Örebro, Sweden.; Turku Bioscience Centre, University of Turku and Åbo Akademi University, Turku, Finland.<br /><searchLink fieldCode="AU" term="%22Weng+JK%22">Weng JK</searchLink>; Whitehead Institute for Biomedical Research, Cambridge, MA, USA.; Department of Biology, Massachusetts Institute of Technology, Cambridge, MA, USA.<br /><searchLink fieldCode="AU" term="%22Böcker+S%22">Böcker S</searchLink>; Chair for Bioinformatics, Friedrich Schiller University Jena, Jena, Germany.<br /><searchLink fieldCode="AU" term="%22Jeibmann+A%22">Jeibmann A</searchLink>; Institute of Neuropathology, University Hospital Münster, Münster, Germany.<br /><searchLink fieldCode="AU" term="%22Hayen+H%22">Hayen H</searchLink>; Institute of Inorganic and Analytical Chemistry, University of Münster, Münster, Germany.<br /><searchLink fieldCode="AU" term="%22Karst+U%22">Karst U</searchLink>; Institute of Inorganic and Analytical Chemistry, University of Münster, Münster, Germany.<br /><searchLink fieldCode="AU" term="%22Dorrestein+PC%22">Dorrestein PC</searchLink>; Collaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, CA, USA.<br /><searchLink fieldCode="AU" term="%22Petras+D%22">Petras D</searchLink>; CMFI Cluster of Excellence, University of Tuebingen, Tuebingen, Germany.<br /><searchLink fieldCode="AU" term="%22Du+X%22">Du X</searchLink>; Department of Bioinformatics and Genomics, University of North Carolina at Charlotte, Charlotte, NC, USA.<br /><searchLink fieldCode="AU" term="%22Pluskal+T%22">Pluskal T</searchLink>; Institute of Organic Chemistry and Biochemistry of the Czech Academy of Sciences, Prague, Czech Republic. tomas.pluskal@uochb.cas.cz. – Name: TitleSource Label: Source Group: Src Data: <searchLink fieldCode="JN" term="%229604648%22">Nature biotechnology</searchLink> [Nat Biotechnol] 2023 Apr; Vol. 41 (4), pp. 447-449. – Name: TypePub Label: Publication Type Group: TypPub Data: Letter – Name: TitleSource Label: Journal Info Group: Src Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22Nature+America+Publishing%22">Nature America Publishing </searchLink><i>Country of Publication: </i>United States <i>NLM ID: </i>9604648 <i>Publication Model: </i>Print <i>Cited Medium: </i>Internet <i>ISSN: </i>1546-1696 (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2210870156%22">10870156 </searchLink><i>NLM ISO Abbreviation: </i>Nat Biotechnol <i>Subsets: </i>MEDLINE |
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