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Single-cell multi-scale footprinting reveals the modular organization of DNA regulatory elements.

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Title: Single-cell multi-scale footprinting reveals the modular organization of DNA regulatory elements.
Authors: Hu Y; Gene Regulation Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, 02142 USA.; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, 02138 USA., Ma S; Gene Regulation Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, 02142 USA.; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, 02138 USA.; Current address: Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029 USA., Kartha VK; Gene Regulation Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, 02142 USA.; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, 02138 USA., Duarte FM; Gene Regulation Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, 02142 USA.; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, 02138 USA., Horlbeck M; Gene Regulation Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, 02142 USA.; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, 02138 USA., Zhang R; Gene Regulation Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, 02142 USA.; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, 02138 USA., Shrestha R; Gene Regulation Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, 02142 USA.; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, 02138 USA., Labade A; Gene Regulation Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, 02142 USA.; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, 02138 USA., Kletzien H; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, 02138 USA.; Paul F. Glenn Center for the Biology of Aging, Harvard Medical School, Boston, MA 02115., Meliki A; Gene Regulation Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, 02142 USA.; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, 02138 USA., Castillo A; Gene Regulation Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, 02142 USA.; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, 02138 USA., Durand N; Gene Regulation Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, 02142 USA., Mattei E; Gene Regulation Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, 02142 USA., Anderson LJ; Gene Regulation Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, 02142 USA., Tay T; Gene Regulation Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, 02142 USA.; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, 02138 USA., Earl AS; Gene Regulation Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, 02142 USA.; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, 02138 USA., Shoresh N; Gene Regulation Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, 02142 USA., Epstein CB; Gene Regulation Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, 02142 USA., Wagers A; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, 02138 USA.; Paul F. Glenn Center for the Biology of Aging, Harvard Medical School, Boston, MA 02115., Buenrostro JD; Gene Regulation Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, 02142 USA.; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, 02138 USA.
Source: BioRxiv : the preprint server for biology [bioRxiv] 2023 Mar 29. Date of Electronic Publication: 2023 Mar 29.
Publication Type: Preprint; Journal Article
Journal Info: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE
Database: MEDLINE Ultimate
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  Data: Single-cell multi-scale footprinting reveals the modular organization of DNA regulatory elements.
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  Data: <searchLink fieldCode="AU" term="%22Hu+Y%22">Hu Y</searchLink>; Gene Regulation Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, 02142 USA.; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, 02138 USA.<br /><searchLink fieldCode="AU" term="%22Ma+S%22">Ma S</searchLink>; Gene Regulation Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, 02142 USA.; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, 02138 USA.; Current address: Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY 10029 USA.<br /><searchLink fieldCode="AU" term="%22Kartha+VK%22">Kartha VK</searchLink>; Gene Regulation Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, 02142 USA.; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, 02138 USA.<br /><searchLink fieldCode="AU" term="%22Duarte+FM%22">Duarte FM</searchLink>; Gene Regulation Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, 02142 USA.; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, 02138 USA.<br /><searchLink fieldCode="AU" term="%22Horlbeck+M%22">Horlbeck M</searchLink>; Gene Regulation Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, 02142 USA.; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, 02138 USA.<br /><searchLink fieldCode="AU" term="%22Zhang+R%22">Zhang R</searchLink>; Gene Regulation Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, 02142 USA.; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, 02138 USA.<br /><searchLink fieldCode="AU" term="%22Shrestha+R%22">Shrestha R</searchLink>; Gene Regulation Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, 02142 USA.; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, 02138 USA.<br /><searchLink fieldCode="AU" term="%22Labade+A%22">Labade A</searchLink>; Gene Regulation Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, 02142 USA.; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, 02138 USA.<br /><searchLink fieldCode="AU" term="%22Kletzien+H%22">Kletzien H</searchLink>; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, 02138 USA.; Paul F. Glenn Center for the Biology of Aging, Harvard Medical School, Boston, MA 02115.<br /><searchLink fieldCode="AU" term="%22Meliki+A%22">Meliki A</searchLink>; Gene Regulation Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, 02142 USA.; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, 02138 USA.<br /><searchLink fieldCode="AU" term="%22Castillo+A%22">Castillo A</searchLink>; Gene Regulation Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, 02142 USA.; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, 02138 USA.<br /><searchLink fieldCode="AU" term="%22Durand+N%22">Durand N</searchLink>; Gene Regulation Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, 02142 USA.<br /><searchLink fieldCode="AU" term="%22Mattei+E%22">Mattei E</searchLink>; Gene Regulation Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, 02142 USA.<br /><searchLink fieldCode="AU" term="%22Anderson+LJ%22">Anderson LJ</searchLink>; Gene Regulation Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, 02142 USA.<br /><searchLink fieldCode="AU" term="%22Tay+T%22">Tay T</searchLink>; Gene Regulation Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, 02142 USA.; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, 02138 USA.<br /><searchLink fieldCode="AU" term="%22Earl+AS%22">Earl AS</searchLink>; Gene Regulation Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, 02142 USA.; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, 02138 USA.<br /><searchLink fieldCode="AU" term="%22Shoresh+N%22">Shoresh N</searchLink>; Gene Regulation Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, 02142 USA.<br /><searchLink fieldCode="AU" term="%22Epstein+CB%22">Epstein CB</searchLink>; Gene Regulation Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, 02142 USA.<br /><searchLink fieldCode="AU" term="%22Wagers+A%22">Wagers A</searchLink>; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, 02138 USA.; Paul F. Glenn Center for the Biology of Aging, Harvard Medical School, Boston, MA 02115.<br /><searchLink fieldCode="AU" term="%22Buenrostro+JD%22">Buenrostro JD</searchLink>; Gene Regulation Observatory, Broad Institute of MIT and Harvard, Cambridge, MA, 02142 USA.; Department of Stem Cell and Regenerative Biology, Harvard University, Cambridge, MA, 02138 USA.
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