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Chromosome-length genome assemblies and cytogenomic analyses of pangolins reveal remarkable chromosome counts and plasticity.

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Title: Chromosome-length genome assemblies and cytogenomic analyses of pangolins reveal remarkable chromosome counts and plasticity.
Authors: Houck ML; Conservation Science and Wildlife Health, San Diego Zoo Wildlife Alliance, Escondido, CA, 92027, USA. mhouck@sdzwa.org., Koepfli KP; Smithsonian-Mason School of Conservation, George Mason University, Front Royal, VA, 22630, USA. kkoepfli@gmu.edu.; Center for Species Survival, Smithsonian's National Zoo and Conservation Biology Institute, Front Royal, VA, 22630, USA. kkoepfli@gmu.edu.; Computer Technologies Laboratory, ITMO University, 197101, St. Petersburg, Russia. kkoepfli@gmu.edu., Hains T; Committee On Evolutionary Biology, University of Chicago, Chicago, IL, 60637, USA., Khan R; The Center for Genome Architecture, Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, 77030, USA., Charter SJ; Conservation Science and Wildlife Health, San Diego Zoo Wildlife Alliance, Escondido, CA, 92027, USA., Fronczek JA; Conservation Science and Wildlife Health, San Diego Zoo Wildlife Alliance, Escondido, CA, 92027, USA., Misuraca AC; Conservation Science and Wildlife Health, San Diego Zoo Wildlife Alliance, Escondido, CA, 92027, USA., Kliver S; Center for Evolutionary Hologenomics, The Globe Institute, The University of Copenhagen, 5A, Oester Farimagsgade, 1353, Copenhagen, Denmark., Perelman PL; Department of the Diversity and Evolution of Genomes, Institute of Molecular and Cellular Biology SB RAS, 630090, Novosibirsk, Russia., Beklemisheva V; Department of the Diversity and Evolution of Genomes, Institute of Molecular and Cellular Biology SB RAS, 630090, Novosibirsk, Russia., Graphodatsky A; Department of the Diversity and Evolution of Genomes, Institute of Molecular and Cellular Biology SB RAS, 630090, Novosibirsk, Russia., Luo SJ; The State Key Laboratory of Protein and Plant Gene Research, Peking-Tsinghua Center for Life Sciences (CLS), School of Life Sciences, Peking University, Beijing, 100871, China., O'Brien SJ; Laboratory of Genomic Diversity, Computer Technologies Laboratory, ITMO University, 197101, St. Petersburg, Russia.; Guy Harvey Oceanographic Center, Halmos College of Arts and Sciences, Nova Southeastern University, Fort Lauderdale, FL, 33004, USA., Lim NT; Natural Sciences and Science Education, National Institute of Education, Nanyang Technological University, Singapore, 637616, Singapore., Chin JSC; Taipei Zoo, No. 30 Sec. 2 Xinguang Rd., Taipei, 11656, Taiwan., Guerra V; Department of Biological Sciences, Simon Fraser University, Burnaby, BC, Canada.; Department of Invertebrate Zoology, National Museum of Natural History, Smithsonian Institution, Washington, DC, USA., Tamazian G; Centre for Computational Biology, Peter the Great Saint Petersburg Polytechnic University, St. Petersburg, 195251, Russia., Omer A; The Center for Genome Architecture, Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, 77030, USA., Weisz D; The Center for Genome Architecture, Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, 77030, USA., Kaemmerer K; Pittsburgh Zoo & Aquarium, PA, 15206, Pittsburgh, USA., Sturgeon G; Pittsburgh Zoo & Aquarium, PA, 15206, Pittsburgh, USA., Gaspard J; Pittsburgh Zoo & Aquarium, PA, 15206, Pittsburgh, USA., Hahn A; Pittsburgh Zoo & Aquarium, PA, 15206, Pittsburgh, USA., McDonough M; Pittsburgh Zoo & Aquarium, PA, 15206, Pittsburgh, USA., Garcia-Treviño I; Center for Conservation and Research, San Antonio Zoo, San Antonio, TX, 78212, USA., Gentry J; Center for Conservation and Research, San Antonio Zoo, San Antonio, TX, 78212, USA., Coke RL; Center for Conservation and Research, San Antonio Zoo, San Antonio, TX, 78212, USA., Janecka JE; Department of Biological Sciences, Bayer School of Natural and Environmental Sciences, Duquesne University, Pittsburgh, PA, 15282, USA., Harrigan RJ; Center for Tropical Research, Institute of the Environment and Sustainability, University of California, Los Angeles, CA, 90095, USA., Tinsman J; Center for Tropical Research, Institute of the Environment and Sustainability, University of California, Los Angeles, CA, 90095, USA., Smith TB; Center for Tropical Research, Institute of the Environment and Sustainability, University of California, Los Angeles, CA, 90095, USA.; Department of Ecology and Evolutionary Biology, University of California, Los Angeles, CA, 90095, USA., Aiden EL; The Center for Genome Architecture, Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, 77030, USA.; Departments of Computer Science and Computational and Applied Mathematics, Rice University, Houston, TX, 77030, USA.; Center for Theoretical and Biological Physics, Rice University, Houston, TX, 77030, USA.; Broad Institute of Harvard and Massachusetts Institute of Technology (MIT), Cambridge, MA, 02139, USA., Dudchenko O; The Center for Genome Architecture, Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, 77030, USA. Olga.Dudchenko@bcm.edu.; Center for Theoretical and Biological Physics, Rice University, Houston, TX, 77030, USA. Olga.Dudchenko@bcm.edu.
Source: Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology [Chromosome Res] 2023 Apr 12; Vol. 31 (2), pp. 13. Date of Electronic Publication: 2023 Apr 12.
Publication Type: Journal Article; Research Support, U.S. Gov't, Non-P.H.S.; Research Support, Non-U.S. Gov't; Research Support, N.I.H., Extramural
Journal Info: Publisher: Kluwer Academic Publishers Country of Publication: Netherlands NLM ID: 9313452 Publication Model: Electronic Cited Medium: Internet ISSN: 1573-6849 (Electronic) Linking ISSN: 09673849 NLM ISO Abbreviation: Chromosome Res Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: Chromosome-length genome assemblies and cytogenomic analyses of pangolins reveal remarkable chromosome counts and plasticity.
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  Data: <searchLink fieldCode="AU" term="%22Houck+ML%22">Houck ML</searchLink>; Conservation Science and Wildlife Health, San Diego Zoo Wildlife Alliance, Escondido, CA, 92027, USA. mhouck@sdzwa.org.<br /><searchLink fieldCode="AU" term="%22Koepfli+KP%22">Koepfli KP</searchLink>; Smithsonian-Mason School of Conservation, George Mason University, Front Royal, VA, 22630, USA. kkoepfli@gmu.edu.; Center for Species Survival, Smithsonian's National Zoo and Conservation Biology Institute, Front Royal, VA, 22630, USA. kkoepfli@gmu.edu.; Computer Technologies Laboratory, ITMO University, 197101, St. Petersburg, Russia. kkoepfli@gmu.edu.<br /><searchLink fieldCode="AU" term="%22Hains+T%22">Hains T</searchLink>; Committee On Evolutionary Biology, University of Chicago, Chicago, IL, 60637, USA.<br /><searchLink fieldCode="AU" term="%22Khan+R%22">Khan R</searchLink>; The Center for Genome Architecture, Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, 77030, USA.<br /><searchLink fieldCode="AU" term="%22Charter+SJ%22">Charter SJ</searchLink>; Conservation Science and Wildlife Health, San Diego Zoo Wildlife Alliance, Escondido, CA, 92027, USA.<br /><searchLink fieldCode="AU" term="%22Fronczek+JA%22">Fronczek JA</searchLink>; Conservation Science and Wildlife Health, San Diego Zoo Wildlife Alliance, Escondido, CA, 92027, USA.<br /><searchLink fieldCode="AU" term="%22Misuraca+AC%22">Misuraca AC</searchLink>; Conservation Science and Wildlife Health, San Diego Zoo Wildlife Alliance, Escondido, CA, 92027, USA.<br /><searchLink fieldCode="AU" term="%22Kliver+S%22">Kliver S</searchLink>; Center for Evolutionary Hologenomics, The Globe Institute, The University of Copenhagen, 5A, Oester Farimagsgade, 1353, Copenhagen, Denmark.<br /><searchLink fieldCode="AU" term="%22Perelman+PL%22">Perelman PL</searchLink>; Department of the Diversity and Evolution of Genomes, Institute of Molecular and Cellular Biology SB RAS, 630090, Novosibirsk, Russia.<br /><searchLink fieldCode="AU" term="%22Beklemisheva+V%22">Beklemisheva V</searchLink>; Department of the Diversity and Evolution of Genomes, Institute of Molecular and Cellular Biology SB RAS, 630090, Novosibirsk, Russia.<br /><searchLink fieldCode="AU" term="%22Graphodatsky+A%22">Graphodatsky A</searchLink>; Department of the Diversity and Evolution of Genomes, Institute of Molecular and Cellular Biology SB RAS, 630090, Novosibirsk, Russia.<br /><searchLink fieldCode="AU" term="%22Luo+SJ%22">Luo SJ</searchLink>; The State Key Laboratory of Protein and Plant Gene Research, Peking-Tsinghua Center for Life Sciences (CLS), School of Life Sciences, Peking University, Beijing, 100871, China.<br /><searchLink fieldCode="AU" term="%22O'Brien+SJ%22">O'Brien SJ</searchLink>; Laboratory of Genomic Diversity, Computer Technologies Laboratory, ITMO University, 197101, St. Petersburg, Russia.; Guy Harvey Oceanographic Center, Halmos College of Arts and Sciences, Nova Southeastern University, Fort Lauderdale, FL, 33004, USA.<br /><searchLink fieldCode="AU" term="%22Lim+NT%22">Lim NT</searchLink>; Natural Sciences and Science Education, National Institute of Education, Nanyang Technological University, Singapore, 637616, Singapore.<br /><searchLink fieldCode="AU" term="%22Chin+JSC%22">Chin JSC</searchLink>; Taipei Zoo, No. 30 Sec. 2 Xinguang Rd., Taipei, 11656, Taiwan.<br /><searchLink fieldCode="AU" term="%22Guerra+V%22">Guerra V</searchLink>; Department of Biological Sciences, Simon Fraser University, Burnaby, BC, Canada.; Department of Invertebrate Zoology, National Museum of Natural History, Smithsonian Institution, Washington, DC, USA.<br /><searchLink fieldCode="AU" term="%22Tamazian+G%22">Tamazian G</searchLink>; Centre for Computational Biology, Peter the Great Saint Petersburg Polytechnic University, St. Petersburg, 195251, Russia.<br /><searchLink fieldCode="AU" term="%22Omer+A%22">Omer A</searchLink>; The Center for Genome Architecture, Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, 77030, USA.<br /><searchLink fieldCode="AU" term="%22Weisz+D%22">Weisz D</searchLink>; The Center for Genome Architecture, Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, 77030, USA.<br /><searchLink fieldCode="AU" term="%22Kaemmerer+K%22">Kaemmerer K</searchLink>; Pittsburgh Zoo & Aquarium, PA, 15206, Pittsburgh, USA.<br /><searchLink fieldCode="AU" term="%22Sturgeon+G%22">Sturgeon G</searchLink>; Pittsburgh Zoo & Aquarium, PA, 15206, Pittsburgh, USA.<br /><searchLink fieldCode="AU" term="%22Gaspard+J%22">Gaspard J</searchLink>; Pittsburgh Zoo & Aquarium, PA, 15206, Pittsburgh, USA.<br /><searchLink fieldCode="AU" term="%22Hahn+A%22">Hahn A</searchLink>; Pittsburgh Zoo & Aquarium, PA, 15206, Pittsburgh, USA.<br /><searchLink fieldCode="AU" term="%22McDonough+M%22">McDonough M</searchLink>; Pittsburgh Zoo & Aquarium, PA, 15206, Pittsburgh, USA.<br /><searchLink fieldCode="AU" term="%22Garcia-Treviño+I%22">Garcia-Treviño I</searchLink>; Center for Conservation and Research, San Antonio Zoo, San Antonio, TX, 78212, USA.<br /><searchLink fieldCode="AU" term="%22Gentry+J%22">Gentry J</searchLink>; Center for Conservation and Research, San Antonio Zoo, San Antonio, TX, 78212, USA.<br /><searchLink fieldCode="AU" term="%22Coke+RL%22">Coke RL</searchLink>; Center for Conservation and Research, San Antonio Zoo, San Antonio, TX, 78212, USA.<br /><searchLink fieldCode="AU" term="%22Janecka+JE%22">Janecka JE</searchLink>; Department of Biological Sciences, Bayer School of Natural and Environmental Sciences, Duquesne University, Pittsburgh, PA, 15282, USA.<br /><searchLink fieldCode="AU" term="%22Harrigan+RJ%22">Harrigan RJ</searchLink>; Center for Tropical Research, Institute of the Environment and Sustainability, University of California, Los Angeles, CA, 90095, USA.<br /><searchLink fieldCode="AU" term="%22Tinsman+J%22">Tinsman J</searchLink>; Center for Tropical Research, Institute of the Environment and Sustainability, University of California, Los Angeles, CA, 90095, USA.<br /><searchLink fieldCode="AU" term="%22Smith+TB%22">Smith TB</searchLink>; Center for Tropical Research, Institute of the Environment and Sustainability, University of California, Los Angeles, CA, 90095, USA.; Department of Ecology and Evolutionary Biology, University of California, Los Angeles, CA, 90095, USA.<br /><searchLink fieldCode="AU" term="%22Aiden+EL%22">Aiden EL</searchLink>; The Center for Genome Architecture, Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, 77030, USA.; Departments of Computer Science and Computational and Applied Mathematics, Rice University, Houston, TX, 77030, USA.; Center for Theoretical and Biological Physics, Rice University, Houston, TX, 77030, USA.; Broad Institute of Harvard and Massachusetts Institute of Technology (MIT), Cambridge, MA, 02139, USA.<br /><searchLink fieldCode="AU" term="%22Dudchenko+O%22">Dudchenko O</searchLink>; The Center for Genome Architecture, Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX, 77030, USA. Olga.Dudchenko@bcm.edu.; Center for Theoretical and Biological Physics, Rice University, Houston, TX, 77030, USA. Olga.Dudchenko@bcm.edu.
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