Effect of compensatory evolution in the emergence and transmission of rifampicin-resistant Mycobacterium tuberculosis in Cape Town, South Africa: a genomic epidemiology study.

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Title: Effect of compensatory evolution in the emergence and transmission of rifampicin-resistant Mycobacterium tuberculosis in Cape Town, South Africa: a genomic epidemiology study.
Authors: Goig GA; Medical Parasitology and Infection Biology, Swiss Tropical and Public Health Institute, Allschwil, Switzerland; University of Basel, Basel, Switzerland. Electronic address: galo.goig@swisstph.ch., Menardo F; Department of Plant and Microbial Biology, University of Zürich, Zürich, Switzerland., Salaam-Dreyer Z; Division of Medical Microbiology, Department of Pathology, University of Cape Town, Cape Town, South Africa., Dippenaar A; Tuberculosis Omics Research Consortium, Family Medicine and Population Health, Institute of Global Health, Faculty of Medicine and Health Sciences, University of Antwerp, Antwerp, Belgium., Streicher EM; Department of Science and Innovation - National Research Foundation Centre of Excellence for Biomedical Tuberculosis Research, Stellenbosch University, Stellenbosch, South Africa; South African Medical Research Council Centre for Tuberculosis Research, Division of Molecular Biology and Human Genetics, Faculty of Medicine and Health Sciences, Stellenbosch University, Stellenbosch, South Africa., Daniels J; Médecins Sans Frontières, Khayelitsha, Cape Town, South Africa., Reuter A; Médecins Sans Frontières, Khayelitsha, Cape Town, South Africa., Borrell S; Medical Parasitology and Infection Biology, Swiss Tropical and Public Health Institute, Allschwil, Switzerland; University of Basel, Basel, Switzerland., Reinhard M; Medical Parasitology and Infection Biology, Swiss Tropical and Public Health Institute, Allschwil, Switzerland; University of Basel, Basel, Switzerland., Doetsch A; Medical Parasitology and Infection Biology, Swiss Tropical and Public Health Institute, Allschwil, Switzerland; University of Basel, Basel, Switzerland., Beisel C; Department of Biosystems Science and Engineering, Eidgenössische Technische Hochschule Zürich, Zürich, Swizterland., Warren RM; Department of Science and Innovation - National Research Foundation Centre of Excellence for Biomedical Tuberculosis Research, Stellenbosch University, Stellenbosch, South Africa; South African Medical Research Council Centre for Tuberculosis Research, Division of Molecular Biology and Human Genetics, Faculty of Medicine and Health Sciences, Stellenbosch University, Stellenbosch, South Africa., Cox H; Division of Medical Microbiology, Department of Pathology, University of Cape Town, Cape Town, South Africa; Institute of Infectious Disease and Molecular Medicine and Wellcome Centre for Infectious Disease Research, University of Cape Town, Cape Town, South Africa., Gagneux S; Medical Parasitology and Infection Biology, Swiss Tropical and Public Health Institute, Allschwil, Switzerland; University of Basel, Basel, Switzerland.
Source: The Lancet. Microbe [Lancet Microbe] 2023 Jul; Vol. 4 (7), pp. e506-e515. Date of Electronic Publication: 2023 Jun 06.
Publication Type: Journal Article; Research Support, Non-U.S. Gov't
Journal Info: Publisher: Elsevier Ltd Country of Publication: England NLM ID: 101769019 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2666-5247 (Electronic) Linking ISSN: 26665247 NLM ISO Abbreviation: Lancet Microbe Subsets: MEDLINE
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  Data: Effect of compensatory evolution in the emergence and transmission of rifampicin-resistant Mycobacterium tuberculosis in Cape Town, South Africa: a genomic epidemiology study.
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  Data: <searchLink fieldCode="AU" term="%22Goig+GA%22">Goig GA</searchLink>; Medical Parasitology and Infection Biology, Swiss Tropical and Public Health Institute, Allschwil, Switzerland; University of Basel, Basel, Switzerland. Electronic address: galo.goig@swisstph.ch.<br /><searchLink fieldCode="AU" term="%22Menardo+F%22">Menardo F</searchLink>; Department of Plant and Microbial Biology, University of Zürich, Zürich, Switzerland.<br /><searchLink fieldCode="AU" term="%22Salaam-Dreyer+Z%22">Salaam-Dreyer Z</searchLink>; Division of Medical Microbiology, Department of Pathology, University of Cape Town, Cape Town, South Africa.<br /><searchLink fieldCode="AU" term="%22Dippenaar+A%22">Dippenaar A</searchLink>; Tuberculosis Omics Research Consortium, Family Medicine and Population Health, Institute of Global Health, Faculty of Medicine and Health Sciences, University of Antwerp, Antwerp, Belgium.<br /><searchLink fieldCode="AU" term="%22Streicher+EM%22">Streicher EM</searchLink>; Department of Science and Innovation - National Research Foundation Centre of Excellence for Biomedical Tuberculosis Research, Stellenbosch University, Stellenbosch, South Africa; South African Medical Research Council Centre for Tuberculosis Research, Division of Molecular Biology and Human Genetics, Faculty of Medicine and Health Sciences, Stellenbosch University, Stellenbosch, South Africa.<br /><searchLink fieldCode="AU" term="%22Daniels+J%22">Daniels J</searchLink>; Médecins Sans Frontières, Khayelitsha, Cape Town, South Africa.<br /><searchLink fieldCode="AU" term="%22Reuter+A%22">Reuter A</searchLink>; Médecins Sans Frontières, Khayelitsha, Cape Town, South Africa.<br /><searchLink fieldCode="AU" term="%22Borrell+S%22">Borrell S</searchLink>; Medical Parasitology and Infection Biology, Swiss Tropical and Public Health Institute, Allschwil, Switzerland; University of Basel, Basel, Switzerland.<br /><searchLink fieldCode="AU" term="%22Reinhard+M%22">Reinhard M</searchLink>; Medical Parasitology and Infection Biology, Swiss Tropical and Public Health Institute, Allschwil, Switzerland; University of Basel, Basel, Switzerland.<br /><searchLink fieldCode="AU" term="%22Doetsch+A%22">Doetsch A</searchLink>; Medical Parasitology and Infection Biology, Swiss Tropical and Public Health Institute, Allschwil, Switzerland; University of Basel, Basel, Switzerland.<br /><searchLink fieldCode="AU" term="%22Beisel+C%22">Beisel C</searchLink>; Department of Biosystems Science and Engineering, Eidgenössische Technische Hochschule Zürich, Zürich, Swizterland.<br /><searchLink fieldCode="AU" term="%22Warren+RM%22">Warren RM</searchLink>; Department of Science and Innovation - National Research Foundation Centre of Excellence for Biomedical Tuberculosis Research, Stellenbosch University, Stellenbosch, South Africa; South African Medical Research Council Centre for Tuberculosis Research, Division of Molecular Biology and Human Genetics, Faculty of Medicine and Health Sciences, Stellenbosch University, Stellenbosch, South Africa.<br /><searchLink fieldCode="AU" term="%22Cox+H%22">Cox H</searchLink>; Division of Medical Microbiology, Department of Pathology, University of Cape Town, Cape Town, South Africa; Institute of Infectious Disease and Molecular Medicine and Wellcome Centre for Infectious Disease Research, University of Cape Town, Cape Town, South Africa.<br /><searchLink fieldCode="AU" term="%22Gagneux+S%22">Gagneux S</searchLink>; Medical Parasitology and Infection Biology, Swiss Tropical and Public Health Institute, Allschwil, Switzerland; University of Basel, Basel, Switzerland.
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  Data: <searchLink fieldCode="JN" term="%22101769019%22">The Lancet. Microbe</searchLink> [Lancet Microbe] 2023 Jul; Vol. 4 (7), pp. e506-e515. <i>Date of Electronic Publication: </i>2023 Jun 06.
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  Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22Elsevier+Ltd%22">Elsevier Ltd </searchLink><i>Country of Publication: </i>England <i>NLM ID: </i>101769019 <i>Publication Model: </i>Print-Electronic <i>Cited Medium: </i>Internet <i>ISSN: </i>2666-5247 (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2226665247%22">26665247 </searchLink><i>NLM ISO Abbreviation: </i>Lancet Microbe <i>Subsets: </i>MEDLINE
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