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Comparative whole genome analysis reveals re-emergence of human Wa-like and DS-1-like G3 rotaviruses after Rotarix vaccine introduction in Malawi.

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Title: Comparative whole genome analysis reveals re-emergence of human Wa-like and DS-1-like G3 rotaviruses after Rotarix vaccine introduction in Malawi.
Authors: Mhango C; Malawi-Liverpool-Wellcome Clinical Research Programme, Kamuzu University of Health Sciences, Blantyre 312225, Malawi.; Department of Biomedical Sciences, School of Life Sciences and Allied Health Professions, Kamuzu University of Health Sciences, Blantyre 312225, Malawi., Banda A; Department of Computer Science, Faculty of Science, University of Malawi, Zomba 305205, Malawi., Chinyama E; Malawi-Liverpool-Wellcome Clinical Research Programme, Kamuzu University of Health Sciences, Blantyre 312225, Malawi., Mandolo JJ; Malawi-Liverpool-Wellcome Clinical Research Programme, Kamuzu University of Health Sciences, Blantyre 312225, Malawi.; Department of Biomedical Sciences, School of Life Sciences and Allied Health Professions, Kamuzu University of Health Sciences, Blantyre 312225, Malawi., Kumwenda O; Malawi-Liverpool-Wellcome Clinical Research Programme, Kamuzu University of Health Sciences, Blantyre 312225, Malawi., Malamba-Banda C; Malawi-Liverpool-Wellcome Clinical Research Programme, Kamuzu University of Health Sciences, Blantyre 312225, Malawi.; Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool L69 7BE, UK.; Department of Biological Sciences, Academy of Medical Sciences, Malawi University of Science and Technology, Thyolo 310105, Malawi.; Department of Medical Laboratory Sciences, Faculty of Biomedical Sciences and Health Profession, Kamuzu University of Health Sciences, Blantyre 312225, Malawi., Barnes KG; Malawi-Liverpool-Wellcome Clinical Research Programme, Kamuzu University of Health Sciences, Blantyre 312225, Malawi., Kumwenda B; Department of Biomedical Sciences, School of Life Sciences and Allied Health Professions, Kamuzu University of Health Sciences, Blantyre 312225, Malawi., Jambo KC; Malawi-Liverpool-Wellcome Clinical Research Programme, Kamuzu University of Health Sciences, Blantyre 312225, Malawi.; Department of Clinical Sciences, Liverpool School of Tropical Medicine, Liverpool L3 5QA, UK., Donato CM; Enteric Diseases Group, Murdoch Children's Research Institute, 50 Flemington Road, Parkville, Melbourne 3052, Australia.; Department of Paediatrics, The University of Melbourne, Parkville, Victoria 3010, Australia., Esona MD; Diarrhoeal Pathogens Research Unit, Sefako Makgatho Health Sciences University, Medunsa, Pretoria 0204, South Africa., Mwangi PN; Next Generation Sequencing Unit and Division of Virology, Faculty of Health Sciences, University of Free State, Bloemfontein 9300, South Africa., Steele AD; Diarrhoeal Pathogens Research Unit, Sefako Makgatho Health Sciences University, Medunsa, Pretoria 0204, South Africa., Iturriza-Gomara M; Centre for Vaccine Innovation and Access, Program for Appropriate Technology in Health (PATH), Geneva 1218, Switzerland., Cunliffe NA; Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool L69 7BE, UK.; NIHR Health Protection Research Unit in Gastrointestinal Infections, University of Liverpool, Liverpool L69 7BE, UK., Ndze VN; Faculty of Health Sciences, University of Buea, PO Box 63, Buea, Cameroon., Kamng'ona AW; Malawi-Liverpool-Wellcome Clinical Research Programme, Kamuzu University of Health Sciences, Blantyre 312225, Malawi.; Department of Biomedical Sciences, School of Life Sciences and Allied Health Professions, Kamuzu University of Health Sciences, Blantyre 312225, Malawi., Dennis FE; Department of Electron Microscopy and Histopathology, Noguchi Memorial Institute for Medical Research, University of Ghana, Accra, P. O. Box LG 581, Legon, Ghana., Nyaga MM, Chaguza C; Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool L69 7BE, UK.; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, Yale University, New Haven, Connecticut 06510, USA.; NIHR Mucosal Pathogens Research Unit, Division of Infection and Immunity, University College London, London WC1E 6BT, UK.; Yale Institute for Global Health, Yale University, New Haven, Connecticut 06510, USA., Jere KC; Malawi-Liverpool-Wellcome Clinical Research Programme, Kamuzu University of Health Sciences, Blantyre 312225, Malawi.; Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool L69 7BE, UK.; Department of Medical Laboratory Sciences, Faculty of Biomedical Sciences and Health Profession, Kamuzu University of Health Sciences, Blantyre 312225, Malawi.; NIHR Health Protection Research Unit in Gastrointestinal Infections, University of Liverpool, Liverpool L69 7BE, UK.; Next Generation Sequencing Unit and Division of Virology, Faculty of Health Sciences, University of Free State, Bloemfontein 9300, South Africa.
Source: Virus evolution [Virus Evol] 2023 May 22; Vol. 9 (1), pp. vead030. Date of Electronic Publication: 2023 May 22 (Print Publication: 2023).
Publication Type: Journal Article
Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 101664675 Publication Model: eCollection Cited Medium: Print ISSN: 2057-1577 (Print) Linking ISSN: 20571577 NLM ISO Abbreviation: Virus Evol Subsets: PubMed not MEDLINE
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  Data: Comparative whole genome analysis reveals re-emergence of human Wa-like and DS-1-like G3 rotaviruses after Rotarix vaccine introduction in Malawi.
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  Data: <searchLink fieldCode="AU" term="%22Mhango+C%22">Mhango C</searchLink>; Malawi-Liverpool-Wellcome Clinical Research Programme, Kamuzu University of Health Sciences, Blantyre 312225, Malawi.; Department of Biomedical Sciences, School of Life Sciences and Allied Health Professions, Kamuzu University of Health Sciences, Blantyre 312225, Malawi.<br /><searchLink fieldCode="AU" term="%22Banda+A%22">Banda A</searchLink>; Department of Computer Science, Faculty of Science, University of Malawi, Zomba 305205, Malawi.<br /><searchLink fieldCode="AU" term="%22Chinyama+E%22">Chinyama E</searchLink>; Malawi-Liverpool-Wellcome Clinical Research Programme, Kamuzu University of Health Sciences, Blantyre 312225, Malawi.<br /><searchLink fieldCode="AU" term="%22Mandolo+JJ%22">Mandolo JJ</searchLink>; Malawi-Liverpool-Wellcome Clinical Research Programme, Kamuzu University of Health Sciences, Blantyre 312225, Malawi.; Department of Biomedical Sciences, School of Life Sciences and Allied Health Professions, Kamuzu University of Health Sciences, Blantyre 312225, Malawi.<br /><searchLink fieldCode="AU" term="%22Kumwenda+O%22">Kumwenda O</searchLink>; Malawi-Liverpool-Wellcome Clinical Research Programme, Kamuzu University of Health Sciences, Blantyre 312225, Malawi.<br /><searchLink fieldCode="AU" term="%22Malamba-Banda+C%22">Malamba-Banda C</searchLink>; Malawi-Liverpool-Wellcome Clinical Research Programme, Kamuzu University of Health Sciences, Blantyre 312225, Malawi.; Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool L69 7BE, UK.; Department of Biological Sciences, Academy of Medical Sciences, Malawi University of Science and Technology, Thyolo 310105, Malawi.; Department of Medical Laboratory Sciences, Faculty of Biomedical Sciences and Health Profession, Kamuzu University of Health Sciences, Blantyre 312225, Malawi.<br /><searchLink fieldCode="AU" term="%22Barnes+KG%22">Barnes KG</searchLink>; Malawi-Liverpool-Wellcome Clinical Research Programme, Kamuzu University of Health Sciences, Blantyre 312225, Malawi.<br /><searchLink fieldCode="AU" term="%22Kumwenda+B%22">Kumwenda B</searchLink>; Department of Biomedical Sciences, School of Life Sciences and Allied Health Professions, Kamuzu University of Health Sciences, Blantyre 312225, Malawi.<br /><searchLink fieldCode="AU" term="%22Jambo+KC%22">Jambo KC</searchLink>; Malawi-Liverpool-Wellcome Clinical Research Programme, Kamuzu University of Health Sciences, Blantyre 312225, Malawi.; Department of Clinical Sciences, Liverpool School of Tropical Medicine, Liverpool L3 5QA, UK.<br /><searchLink fieldCode="AU" term="%22Donato+CM%22">Donato CM</searchLink>; Enteric Diseases Group, Murdoch Children's Research Institute, 50 Flemington Road, Parkville, Melbourne 3052, Australia.; Department of Paediatrics, The University of Melbourne, Parkville, Victoria 3010, Australia.<br /><searchLink fieldCode="AU" term="%22Esona+MD%22">Esona MD</searchLink>; Diarrhoeal Pathogens Research Unit, Sefako Makgatho Health Sciences University, Medunsa, Pretoria 0204, South Africa.<br /><searchLink fieldCode="AU" term="%22Mwangi+PN%22">Mwangi PN</searchLink>; Next Generation Sequencing Unit and Division of Virology, Faculty of Health Sciences, University of Free State, Bloemfontein 9300, South Africa.<br /><searchLink fieldCode="AU" term="%22Steele+AD%22">Steele AD</searchLink>; Diarrhoeal Pathogens Research Unit, Sefako Makgatho Health Sciences University, Medunsa, Pretoria 0204, South Africa.<br /><searchLink fieldCode="AU" term="%22Iturriza-Gomara+M%22">Iturriza-Gomara M</searchLink>; Centre for Vaccine Innovation and Access, Program for Appropriate Technology in Health (PATH), Geneva 1218, Switzerland.<br /><searchLink fieldCode="AU" term="%22Cunliffe+NA%22">Cunliffe NA</searchLink>; Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool L69 7BE, UK.; NIHR Health Protection Research Unit in Gastrointestinal Infections, University of Liverpool, Liverpool L69 7BE, UK.<br /><searchLink fieldCode="AU" term="%22Ndze+VN%22">Ndze VN</searchLink>; Faculty of Health Sciences, University of Buea, PO Box 63, Buea, Cameroon.<br /><searchLink fieldCode="AU" term="%22Kamng'ona+AW%22">Kamng'ona AW</searchLink>; Malawi-Liverpool-Wellcome Clinical Research Programme, Kamuzu University of Health Sciences, Blantyre 312225, Malawi.; Department of Biomedical Sciences, School of Life Sciences and Allied Health Professions, Kamuzu University of Health Sciences, Blantyre 312225, Malawi.<br /><searchLink fieldCode="AU" term="%22Dennis+FE%22">Dennis FE</searchLink>; Department of Electron Microscopy and Histopathology, Noguchi Memorial Institute for Medical Research, University of Ghana, Accra, P. 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Box LG 581, Legon, Ghana.<br /><searchLink fieldCode="AU" term="%22Nyaga+MM%22">Nyaga MM</searchLink><br /><searchLink fieldCode="AU" term="%22Chaguza+C%22">Chaguza C</searchLink>; Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool L69 7BE, UK.; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, Yale University, New Haven, Connecticut 06510, USA.; NIHR Mucosal Pathogens Research Unit, Division of Infection and Immunity, University College London, London WC1E 6BT, UK.; Yale Institute for Global Health, Yale University, New Haven, Connecticut 06510, USA.<br /><searchLink fieldCode="AU" term="%22Jere+KC%22">Jere KC</searchLink>; Malawi-Liverpool-Wellcome Clinical Research Programme, Kamuzu University of Health Sciences, Blantyre 312225, Malawi.; Institute of Infection, Veterinary and Ecological Sciences, University of Liverpool, Liverpool L69 7BE, UK.; Department of Medical Laboratory Sciences, Faculty of Biomedical Sciences and Health Profession, Kamuzu University of Health Sciences, Blantyre 312225, Malawi.; NIHR Health Protection Research Unit in Gastrointestinal Infections, University of Liverpool, Liverpool L69 7BE, UK.; Next Generation Sequencing Unit and Division of Virology, Faculty of Health Sciences, University of Free State, Bloemfontein 9300, South Africa.
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