Performance of tumour microenvironment deconvolution methods in breast cancer using single-cell simulated bulk mixtures.
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| Title: | Performance of tumour microenvironment deconvolution methods in breast cancer using single-cell simulated bulk mixtures. |
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| Authors: | Tran KA; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, QLD, 4006, Australia.; School of Biomedical Sciences, Queensland University of Technology (QUT), Brisbane, QLD, 4000, Australia., Addala V; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, QLD, 4006, Australia., Johnston RL; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, QLD, 4006, Australia., Lovell D; School of Computer Science, Queensland University of Technology, Brisbane, QLD, 4000, Australia.; QUT Centre for Data Science, Brisbane, QLD, 4000, Australia., Bradley A; Faculty of Engineering, Queensland University of Technology, Brisbane, QLD, 4000, Australia., Koufariotis LT; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, QLD, 4006, Australia., Wood S; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, QLD, 4006, Australia., Wu SZ; Cancer Ecosystems Program, Garvan Institute of Medical Research, Darlinghurst, NSW, 2010, Australia.; School of Clinical Medicine, Faculty of Medicine and Health, UNSW Sydney, Kensington, NSW, 2052, Australia., Roden D; Cancer Ecosystems Program, Garvan Institute of Medical Research, Darlinghurst, NSW, 2010, Australia.; School of Clinical Medicine, Faculty of Medicine and Health, UNSW Sydney, Kensington, NSW, 2052, Australia., Al-Eryani G; Cancer Ecosystems Program, Garvan Institute of Medical Research, Darlinghurst, NSW, 2010, Australia.; School of Clinical Medicine, Faculty of Medicine and Health, UNSW Sydney, Kensington, NSW, 2052, Australia., Swarbrick A; Cancer Ecosystems Program, Garvan Institute of Medical Research, Darlinghurst, NSW, 2010, Australia.; School of Clinical Medicine, Faculty of Medicine and Health, UNSW Sydney, Kensington, NSW, 2052, Australia., Williams ED; School of Biomedical Sciences, Queensland University of Technology (QUT), Brisbane, QLD, 4000, Australia.; Australian Prostate Cancer Research Centre - Queensland (APCRC-Q) and Queensland Bladder Cancer Initiative (QBCI), Brisbane, QLD, 4000, Australia., Pearson JV; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, QLD, 4006, Australia., Kondrashova O; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, QLD, 4006, Australia., Waddell N; Cancer Program, QIMR Berghofer Medical Research Institute, Brisbane, QLD, 4006, Australia. Nic.waddell@qimrberghofer.edu.au.; School of Biomedical Sciences, Queensland University of Technology (QUT), Brisbane, QLD, 4000, Australia. Nic.waddell@qimrberghofer.edu.au. |
| Source: | Nature communications [Nat Commun] 2023 Sep 16; Vol. 14 (1), pp. 5758. Date of Electronic Publication: 2023 Sep 16. |
| Publication Type: | Journal Article; Research Support, Non-U.S. Gov't |
| Journal Info: | Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE |
| Database: | MEDLINE Ultimate |
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