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Topological data analysis reveals a core gene expression backbone that defines form and function across flowering plants.

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Title: Topological data analysis reveals a core gene expression backbone that defines form and function across flowering plants.
Authors: Palande S; Department of Computational Mathematics, Science & Engineering, Michigan State University, East Lansing, Michigan, United States of America., Kaste JAM; Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, United States of America.; Department of Plant Biology, Michigan State University, East Lansing, Michigan, United States of America., Roberts MD; Department of Plant Biology, Michigan State University, East Lansing, Michigan, United States of America., Segura Abá K; Department of Plant Biology, Michigan State University, East Lansing, Michigan, United States of America., Claucherty C; Department of Plant, Soil & Microbial Sciences, Michigan State University, East Lansing, Michigan, United States of America., Dacon J; Department of Computer Science and Engineering, Michigan State University, East Lansing, Michigan, United States of America., Doko R; Department of Computer Science and Engineering, Michigan State University, East Lansing, Michigan, United States of America., Jayakody TB; Department of Plant, Soil & Microbial Sciences, Michigan State University, East Lansing, Michigan, United States of America., Jeffery HR; Department of Plant, Soil & Microbial Sciences, Michigan State University, East Lansing, Michigan, United States of America., Kelly N; Department of Horticulture, Michigan State University, East Lansing, Michigan, United States of America., Manousidaki A; Department of Statistics and Probability, Michigan State University, East Lansing, Michigan, United States of America., Parks HM; Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, United States of America., Roggenkamp EM; Department of Plant, Soil & Microbial Sciences, Michigan State University, East Lansing, Michigan, United States of America., Schumacher AM; Department of Plant Biology, Michigan State University, East Lansing, Michigan, United States of America., Yang J; Department of Computational Mathematics, Science & Engineering, Michigan State University, East Lansing, Michigan, United States of America., Percival S; Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, United States of America., Pardo J; Department of Plant Biology, Michigan State University, East Lansing, Michigan, United States of America., Husbands AY; Department of Biology, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America., Krishnan A; Department of Computational Mathematics, Science & Engineering, Michigan State University, East Lansing, Michigan, United States of America.; Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, United States of America., Montgomery BL; Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, United States of America.; Department of Microbiology & Molecular Genetics, Michigan State University, East Lansing, Michigan, United States of America.; MSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, Michigan, United States of America., Munch E; Department of Computational Mathematics, Science & Engineering, Michigan State University, East Lansing, Michigan, United States of America.; Department of Mathematics, Michigan State University, East Lansing, Michigan, United States of America., Thompson AM; Department of Plant, Soil & Microbial Sciences, Michigan State University, East Lansing, Michigan, United States of America.; Plant Resilience Institute, Michigan State University, East Lansing, Michigan, United States of America., Rougon-Cardoso A; Laboratory of Agrigenomic Sciences, Universidad Nacional Autónoma de México, ENES-León, León, Mexico.; Laboratorio Nacional Plantecc, ENES-León, León, Mexico., Chitwood DH; Department of Computational Mathematics, Science & Engineering, Michigan State University, East Lansing, Michigan, United States of America.; Department of Horticulture, Michigan State University, East Lansing, Michigan, United States of America., VanBuren R; Department of Horticulture, Michigan State University, East Lansing, Michigan, United States of America.; Plant Resilience Institute, Michigan State University, East Lansing, Michigan, United States of America.
Source: PLoS biology [PLoS Biol] 2023 Dec 05; Vol. 21 (12), pp. e3002397. Date of Electronic Publication: 2023 Dec 05 (Print Publication: 2023).
Publication Type: Journal Article; Research Support, Non-U.S. Gov't; Research Support, N.I.H., Extramural; Research Support, U.S. Gov't, Non-P.H.S.
Journal Info: Publisher: Public Library of Science Country of Publication: United States NLM ID: 101183755 Publication Model: eCollection Cited Medium: Internet ISSN: 1545-7885 (Electronic) Linking ISSN: 15449173 NLM ISO Abbreviation: PLoS Biol Subsets: MEDLINE
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  Data: Topological data analysis reveals a core gene expression backbone that defines form and function across flowering plants.
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  Data: <searchLink fieldCode="AU" term="%22Palande+S%22">Palande S</searchLink>; Department of Computational Mathematics, Science & Engineering, Michigan State University, East Lansing, Michigan, United States of America.<br /><searchLink fieldCode="AU" term="%22Kaste+JAM%22">Kaste JAM</searchLink>; Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, United States of America.; Department of Plant Biology, Michigan State University, East Lansing, Michigan, United States of America.<br /><searchLink fieldCode="AU" term="%22Roberts+MD%22">Roberts MD</searchLink>; Department of Plant Biology, Michigan State University, East Lansing, Michigan, United States of America.<br /><searchLink fieldCode="AU" term="%22Segura+Abá+K%22">Segura Abá K</searchLink>; Department of Plant Biology, Michigan State University, East Lansing, Michigan, United States of America.<br /><searchLink fieldCode="AU" term="%22Claucherty+C%22">Claucherty C</searchLink>; Department of Plant, Soil & Microbial Sciences, Michigan State University, East Lansing, Michigan, United States of America.<br /><searchLink fieldCode="AU" term="%22Dacon+J%22">Dacon J</searchLink>; Department of Computer Science and Engineering, Michigan State University, East Lansing, Michigan, United States of America.<br /><searchLink fieldCode="AU" term="%22Doko+R%22">Doko R</searchLink>; Department of Computer Science and Engineering, Michigan State University, East Lansing, Michigan, United States of America.<br /><searchLink fieldCode="AU" term="%22Jayakody+TB%22">Jayakody TB</searchLink>; Department of Plant, Soil & Microbial Sciences, Michigan State University, East Lansing, Michigan, United States of America.<br /><searchLink fieldCode="AU" term="%22Jeffery+HR%22">Jeffery HR</searchLink>; Department of Plant, Soil & Microbial Sciences, Michigan State University, East Lansing, Michigan, United States of America.<br /><searchLink fieldCode="AU" term="%22Kelly+N%22">Kelly N</searchLink>; Department of Horticulture, Michigan State University, East Lansing, Michigan, United States of America.<br /><searchLink fieldCode="AU" term="%22Manousidaki+A%22">Manousidaki A</searchLink>; Department of Statistics and Probability, Michigan State University, East Lansing, Michigan, United States of America.<br /><searchLink fieldCode="AU" term="%22Parks+HM%22">Parks HM</searchLink>; Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, United States of America.<br /><searchLink fieldCode="AU" term="%22Roggenkamp+EM%22">Roggenkamp EM</searchLink>; Department of Plant, Soil & Microbial Sciences, Michigan State University, East Lansing, Michigan, United States of America.<br /><searchLink fieldCode="AU" term="%22Schumacher+AM%22">Schumacher AM</searchLink>; Department of Plant Biology, Michigan State University, East Lansing, Michigan, United States of America.<br /><searchLink fieldCode="AU" term="%22Yang+J%22">Yang J</searchLink>; Department of Computational Mathematics, Science & Engineering, Michigan State University, East Lansing, Michigan, United States of America.<br /><searchLink fieldCode="AU" term="%22Percival+S%22">Percival S</searchLink>; Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, United States of America.<br /><searchLink fieldCode="AU" term="%22Pardo+J%22">Pardo J</searchLink>; Department of Plant Biology, Michigan State University, East Lansing, Michigan, United States of America.<br /><searchLink fieldCode="AU" term="%22Husbands+AY%22">Husbands AY</searchLink>; Department of Biology, University of Pennsylvania, Philadelphia, Pennsylvania, United States of America.<br /><searchLink fieldCode="AU" term="%22Krishnan+A%22">Krishnan A</searchLink>; Department of Computational Mathematics, Science & Engineering, Michigan State University, East Lansing, Michigan, United States of America.; Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, United States of America.<br /><searchLink fieldCode="AU" term="%22Montgomery+BL%22">Montgomery BL</searchLink>; Department of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, United States of America.; Department of Microbiology & Molecular Genetics, Michigan State University, East Lansing, Michigan, United States of America.; MSU-DOE Plant Research Laboratory, Michigan State University, East Lansing, Michigan, United States of America.<br /><searchLink fieldCode="AU" term="%22Munch+E%22">Munch E</searchLink>; Department of Computational Mathematics, Science & Engineering, Michigan State University, East Lansing, Michigan, United States of America.; Department of Mathematics, Michigan State University, East Lansing, Michigan, United States of America.<br /><searchLink fieldCode="AU" term="%22Thompson+AM%22">Thompson AM</searchLink>; Department of Plant, Soil & Microbial Sciences, Michigan State University, East Lansing, Michigan, United States of America.; Plant Resilience Institute, Michigan State University, East Lansing, Michigan, United States of America.<br /><searchLink fieldCode="AU" term="%22Rougon-Cardoso+A%22">Rougon-Cardoso A</searchLink>; Laboratory of Agrigenomic Sciences, Universidad Nacional Autónoma de México, ENES-León, León, Mexico.; Laboratorio Nacional Plantecc, ENES-León, León, Mexico.<br /><searchLink fieldCode="AU" term="%22Chitwood+DH%22">Chitwood DH</searchLink>; Department of Computational Mathematics, Science & Engineering, Michigan State University, East Lansing, Michigan, United States of America.; Department of Horticulture, Michigan State University, East Lansing, Michigan, United States of America.<br /><searchLink fieldCode="AU" term="%22VanBuren+R%22">VanBuren R</searchLink>; Department of Horticulture, Michigan State University, East Lansing, Michigan, United States of America.; Plant Resilience Institute, Michigan State University, East Lansing, Michigan, United States of America.
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  Data: <searchLink fieldCode="JN" term="%22101183755%22">PLoS biology</searchLink> [PLoS Biol] 2023 Dec 05; Vol. 21 (12), pp. e3002397. <i>Date of Electronic Publication: </i>2023 Dec 05 (<i>Print Publication: </i>2023).
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