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Improved modeling of RNA-binding protein motifs in an interpretable neural model of RNA splicing.

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Title: Improved modeling of RNA-binding protein motifs in an interpretable neural model of RNA splicing.
Authors: Gupta K; Department of Electrical Engineering and Computer Science, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA., Yang C; Department of Computer Science, University of Texas at Austin, Austin, TX, 78712, USA., McCue K; Department of Biology, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA., Bastani O; Department of Computer and Information Science, University of Pennsylvania, Philadelphia, PA, 19104, USA., Sharp PA; Department of Biology, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA.; Koch Institute of Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA., Burge CB; Department of Biology, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA. cburge@mit.edu., Solar-Lezama A; Department of Electrical Engineering and Computer Science, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA. asolar@mit.edu.
Source: Genome biology [Genome Biol] 2024 Jan 16; Vol. 25 (1), pp. 23. Date of Electronic Publication: 2024 Jan 16.
Publication Type: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
Journal Info: Publisher: BioMed Central Ltd Country of Publication: England NLM ID: 100960660 Publication Model: Electronic Cited Medium: Internet ISSN: 1474-760X (Electronic) Linking ISSN: 14747596 NLM ISO Abbreviation: Genome Biol Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: Improved modeling of RNA-binding protein motifs in an interpretable neural model of RNA splicing.
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  Data: <searchLink fieldCode="AU" term="%22Gupta+K%22">Gupta K</searchLink>; Department of Electrical Engineering and Computer Science, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA.<br /><searchLink fieldCode="AU" term="%22Yang+C%22">Yang C</searchLink>; Department of Computer Science, University of Texas at Austin, Austin, TX, 78712, USA.<br /><searchLink fieldCode="AU" term="%22McCue+K%22">McCue K</searchLink>; Department of Biology, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA.<br /><searchLink fieldCode="AU" term="%22Bastani+O%22">Bastani O</searchLink>; Department of Computer and Information Science, University of Pennsylvania, Philadelphia, PA, 19104, USA.<br /><searchLink fieldCode="AU" term="%22Sharp+PA%22">Sharp PA</searchLink>; Department of Biology, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA.; Koch Institute of Integrative Cancer Research, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA.<br /><searchLink fieldCode="AU" term="%22Burge+CB%22">Burge CB</searchLink>; Department of Biology, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA. cburge@mit.edu.<br /><searchLink fieldCode="AU" term="%22Solar-Lezama+A%22">Solar-Lezama A</searchLink>; Department of Electrical Engineering and Computer Science, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA. asolar@mit.edu.
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  Data: <searchLink fieldCode="JN" term="%22100960660%22">Genome biology</searchLink> [Genome Biol] 2024 Jan 16; Vol. 25 (1), pp. 23. <i>Date of Electronic Publication: </i>2024 Jan 16.
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  Data: Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't; Research Support, U.S. Gov't, Non-P.H.S.
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  Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22BioMed+Central+Ltd%22">BioMed Central Ltd </searchLink><i>Country of Publication: </i>England <i>NLM ID: </i>100960660 <i>Publication Model: </i>Electronic <i>Cited Medium: </i>Internet <i>ISSN: </i>1474-760X (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2214747596%22">14747596 </searchLink><i>NLM ISO Abbreviation: </i>Genome Biol <i>Subsets: </i>MEDLINE
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        Value: 10.1186/s13059-023-03162-x
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              Text: 2024 Jan 16
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