Improving gene set enrichment analysis (GSEA) by using regulation directionality.

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Title: Improving gene set enrichment analysis (GSEA) by using regulation directionality.
Authors: Wang B; Swammerdam Institute for Life Sciences, University of Amsterdam, Amsterdam, the Netherlands., van der Kloet F; Swammerdam Institute for Life Sciences, University of Amsterdam, Amsterdam, the Netherlands., Kes MBMJ; Molecular Microbiology, Amsterdam Institute of Molecular and Life Sciences, Vrije Universiteit Amsterdam, Amsterdam, the Netherlands., Luirink J; Molecular Microbiology, Amsterdam Institute of Molecular and Life Sciences, Vrije Universiteit Amsterdam, Amsterdam, the Netherlands., Hamoen LW; Swammerdam Institute for Life Sciences, University of Amsterdam, Amsterdam, the Netherlands.
Source: Microbiology spectrum [Microbiol Spectr] 2024 Mar 05; Vol. 12 (3), pp. e0345623. Date of Electronic Publication: 2024 Jan 31.
Publication Type: Journal Article; Research Support, Non-U.S. Gov't
Journal Info: Publisher: ASM Press Country of Publication: United States NLM ID: 101634614 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2165-0497 (Electronic) Linking ISSN: 21650497 NLM ISO Abbreviation: Microbiol Spectr Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: <searchLink fieldCode="AU" term="%22Wang+B%22">Wang B</searchLink>; Swammerdam Institute for Life Sciences, University of Amsterdam, Amsterdam, the Netherlands.<br /><searchLink fieldCode="AU" term="%22van+der+Kloet+F%22">van der Kloet F</searchLink>; Swammerdam Institute for Life Sciences, University of Amsterdam, Amsterdam, the Netherlands.<br /><searchLink fieldCode="AU" term="%22Kes+MBMJ%22">Kes MBMJ</searchLink>; Molecular Microbiology, Amsterdam Institute of Molecular and Life Sciences, Vrije Universiteit Amsterdam, Amsterdam, the Netherlands.<br /><searchLink fieldCode="AU" term="%22Luirink+J%22">Luirink J</searchLink>; Molecular Microbiology, Amsterdam Institute of Molecular and Life Sciences, Vrije Universiteit Amsterdam, Amsterdam, the Netherlands.<br /><searchLink fieldCode="AU" term="%22Hamoen+LW%22">Hamoen LW</searchLink>; Swammerdam Institute for Life Sciences, University of Amsterdam, Amsterdam, the Netherlands.
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  Data: <searchLink fieldCode="JN" term="%22101634614%22">Microbiology spectrum</searchLink> [Microbiol Spectr] 2024 Mar 05; Vol. 12 (3), pp. e0345623. <i>Date of Electronic Publication: </i>2024 Jan 31.
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  Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22ASM+Press%22">ASM Press </searchLink><i>Country of Publication: </i>United States <i>NLM ID: </i>101634614 <i>Publication Model: </i>Print-Electronic <i>Cited Medium: </i>Internet <i>ISSN: </i>2165-0497 (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2221650497%22">21650497 </searchLink><i>NLM ISO Abbreviation: </i>Microbiol Spectr <i>Subsets: </i>MEDLINE
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        Value: 10.1128/spectrum.03456-23
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      – Code: eng
        Text: English
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              Text: 2024 Mar 05
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