Genomic prediction using machine learning: a comparison of the performance of regularized regression, ensemble, instance-based and deep learning methods on synthetic and empirical data.

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Title: Genomic prediction using machine learning: a comparison of the performance of regularized regression, ensemble, instance-based and deep learning methods on synthetic and empirical data.
Authors: Lourenço VM; Center for Mathematics and Applications (NOVA Math) and Department of Mathematics, NOVA SST, 2829-516, Caparica, Portugal. vmml@fct.unl.pt., Ogutu JO; Institute of Crop Science, Biostatistics Unit, University of Hohenheim, Fruwirthstrasse 23, 70599, Stuttgart, Germany. jogutu2007@gmail.com., Rodrigues RAP; Center for Mathematics and Applications (NOVA Math) and Department of Mathematics, NOVA SST, 2829-516, Caparica, Portugal., Posekany A; Research Unit of Computational Statistics, Vienna University of Technology, Wiedner Hauptstr. 8-10, 1040, Vienna, Austria., Piepho HP; Institute of Crop Science, Biostatistics Unit, University of Hohenheim, Fruwirthstrasse 23, 70599, Stuttgart, Germany.
Source: BMC genomics [BMC Genomics] 2024 Feb 07; Vol. 25 (1), pp. 152. Date of Electronic Publication: 2024 Feb 07.
Publication Type: Journal Article
Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164 (Electronic) Linking ISSN: 14712164 NLM ISO Abbreviation: BMC Genomics Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: <searchLink fieldCode="AU" term="%22Lourenço+VM%22">Lourenço VM</searchLink>; Center for Mathematics and Applications (NOVA Math) and Department of Mathematics, NOVA SST, 2829-516, Caparica, Portugal. vmml@fct.unl.pt.<br /><searchLink fieldCode="AU" term="%22Ogutu+JO%22">Ogutu JO</searchLink>; Institute of Crop Science, Biostatistics Unit, University of Hohenheim, Fruwirthstrasse 23, 70599, Stuttgart, Germany. jogutu2007@gmail.com.<br /><searchLink fieldCode="AU" term="%22Rodrigues+RAP%22">Rodrigues RAP</searchLink>; Center for Mathematics and Applications (NOVA Math) and Department of Mathematics, NOVA SST, 2829-516, Caparica, Portugal.<br /><searchLink fieldCode="AU" term="%22Posekany+A%22">Posekany A</searchLink>; Research Unit of Computational Statistics, Vienna University of Technology, Wiedner Hauptstr. 8-10, 1040, Vienna, Austria.<br /><searchLink fieldCode="AU" term="%22Piepho+HP%22">Piepho HP</searchLink>; Institute of Crop Science, Biostatistics Unit, University of Hohenheim, Fruwirthstrasse 23, 70599, Stuttgart, Germany.
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        Value: 10.1186/s12864-023-09933-x
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              Text: 2024 Feb 07
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