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Remarkably High Repeat Content in the Genomes of Sparrows: The Importance of Genome Assembly Completeness for Transposable Element Discovery.

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Title: Remarkably High Repeat Content in the Genomes of Sparrows: The Importance of Genome Assembly Completeness for Transposable Element Discovery.
Authors: Benham PM; Museum of Vertebrate Zoology, University of California Berkeley, Berkeley, CA 94720, USA.; Department of Integrative Biology, University of California Berkeley, Berkeley, CA 94720, USA., Cicero C; Museum of Vertebrate Zoology, University of California Berkeley, Berkeley, CA 94720, USA., Escalona M; Department of Biomolecular Engineering, University of California Santa Cruz, Santa Cruz, CA 95064, USA., Beraut E; Department of Ecology and Evolutionary Biology, University of California, Santa Cruz, Santa Cruz, CA 95064, USA., Fairbairn C; Department of Ecology and Evolutionary Biology, University of California, Santa Cruz, Santa Cruz, CA 95064, USA., Marimuthu MPA; DNA Technologies and Expression Analysis Core Laboratory, Genome Center, University of California-Davis, Davis, CA 95616, USA., Nguyen O; DNA Technologies and Expression Analysis Core Laboratory, Genome Center, University of California-Davis, Davis, CA 95616, USA., Sahasrabudhe R; DNA Technologies and Expression Analysis Core Laboratory, Genome Center, University of California-Davis, Davis, CA 95616, USA., King BL; Department of Molecular and Biomedical Sciences, University of Maine, Orono, ME 04469, USA., Thomas WK; Department of Molecular, Cellular and Biomedical Sciences, University of New Hampshire, Durham, NH 03824, USA., Kovach AI; Department of Natural Resources and the Environment, University of New Hampshire, Durham, NH 03824, USA., Nachman MW; Museum of Vertebrate Zoology, University of California Berkeley, Berkeley, CA 94720, USA.; Department of Integrative Biology, University of California Berkeley, Berkeley, CA 94720, USA., Bowie RCK; Museum of Vertebrate Zoology, University of California Berkeley, Berkeley, CA 94720, USA.; Department of Integrative Biology, University of California Berkeley, Berkeley, CA 94720, USA.
Source: Genome biology and evolution [Genome Biol Evol] 2024 Apr 02; Vol. 16 (4).
Publication Type: Journal Article; Research Support, Non-U.S. Gov't; Research Support, N.I.H., Extramural
Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 101509707 Publication Model: Print Cited Medium: Internet ISSN: 1759-6653 (Electronic) Linking ISSN: 17596653 NLM ISO Abbreviation: Genome Biol Evol Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: Remarkably High Repeat Content in the Genomes of Sparrows: The Importance of Genome Assembly Completeness for Transposable Element Discovery.
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  Data: <searchLink fieldCode="AU" term="%22Benham+PM%22">Benham PM</searchLink>; Museum of Vertebrate Zoology, University of California Berkeley, Berkeley, CA 94720, USA.; Department of Integrative Biology, University of California Berkeley, Berkeley, CA 94720, USA.<br /><searchLink fieldCode="AU" term="%22Cicero+C%22">Cicero C</searchLink>; Museum of Vertebrate Zoology, University of California Berkeley, Berkeley, CA 94720, USA.<br /><searchLink fieldCode="AU" term="%22Escalona+M%22">Escalona M</searchLink>; Department of Biomolecular Engineering, University of California Santa Cruz, Santa Cruz, CA 95064, USA.<br /><searchLink fieldCode="AU" term="%22Beraut+E%22">Beraut E</searchLink>; Department of Ecology and Evolutionary Biology, University of California, Santa Cruz, Santa Cruz, CA 95064, USA.<br /><searchLink fieldCode="AU" term="%22Fairbairn+C%22">Fairbairn C</searchLink>; Department of Ecology and Evolutionary Biology, University of California, Santa Cruz, Santa Cruz, CA 95064, USA.<br /><searchLink fieldCode="AU" term="%22Marimuthu+MPA%22">Marimuthu MPA</searchLink>; DNA Technologies and Expression Analysis Core Laboratory, Genome Center, University of California-Davis, Davis, CA 95616, USA.<br /><searchLink fieldCode="AU" term="%22Nguyen+O%22">Nguyen O</searchLink>; DNA Technologies and Expression Analysis Core Laboratory, Genome Center, University of California-Davis, Davis, CA 95616, USA.<br /><searchLink fieldCode="AU" term="%22Sahasrabudhe+R%22">Sahasrabudhe R</searchLink>; DNA Technologies and Expression Analysis Core Laboratory, Genome Center, University of California-Davis, Davis, CA 95616, USA.<br /><searchLink fieldCode="AU" term="%22King+BL%22">King BL</searchLink>; Department of Molecular and Biomedical Sciences, University of Maine, Orono, ME 04469, USA.<br /><searchLink fieldCode="AU" term="%22Thomas+WK%22">Thomas WK</searchLink>; Department of Molecular, Cellular and Biomedical Sciences, University of New Hampshire, Durham, NH 03824, USA.<br /><searchLink fieldCode="AU" term="%22Kovach+AI%22">Kovach AI</searchLink>; Department of Natural Resources and the Environment, University of New Hampshire, Durham, NH 03824, USA.<br /><searchLink fieldCode="AU" term="%22Nachman+MW%22">Nachman MW</searchLink>; Museum of Vertebrate Zoology, University of California Berkeley, Berkeley, CA 94720, USA.; Department of Integrative Biology, University of California Berkeley, Berkeley, CA 94720, USA.<br /><searchLink fieldCode="AU" term="%22Bowie+RCK%22">Bowie RCK</searchLink>; Museum of Vertebrate Zoology, University of California Berkeley, Berkeley, CA 94720, USA.; Department of Integrative Biology, University of California Berkeley, Berkeley, CA 94720, USA.
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