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DengueSeq: a pan-serotype whole genome amplicon sequencing protocol for dengue virus.

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Title: DengueSeq: a pan-serotype whole genome amplicon sequencing protocol for dengue virus.
Authors: Vogels CBF; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, Connecticut, USA. chantal.vogels@yale.edu.; Yale Institute for Global Health, Yale University, New Haven, Connecticut, USA. chantal.vogels@yale.edu., Hill V; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, Connecticut, USA., Breban MI; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, Connecticut, USA., Chaguza C; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, Connecticut, USA.; Yale Institute for Global Health, Yale University, New Haven, Connecticut, USA., Paul LM; Department of Biological Sciences, College of Arts and Sciences, Florida Gulf Coast University, Fort Myers, Florida, USA., Sodeinde A; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, Connecticut, USA., Taylor-Salmon E; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, Connecticut, USA.; Department of Pediatrics, Yale School of Medicine, New Haven, Connecticut, USA., Ott IM; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, Connecticut, USA., Petrone ME; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, Connecticut, USA.; Sydney Institute for Infectious Diseases, School of Medical Sciences, University of Sydney, Sydney, NSW, Australia., Dijk D; Department of Medical Microbiology & Infection Prevention, Amsterdam UMC Location AMC, Amsterdam, The Netherlands., Jonges M; Department of Medical Microbiology & Infection Prevention, Amsterdam UMC Location AMC, Amsterdam, The Netherlands., Welkers MRA; Department of Medical Microbiology & Infection Prevention, Amsterdam UMC Location AMC, Amsterdam, The Netherlands.; Department of Infectious Diseases, Public Health Service of Amsterdam, Amsterdam, The Netherlands., Locksmith T; Bureau of Public Health Laboratories, Division of Disease Control and Health Protection, Florida Department of Health, Tampa, FL, USA., Dong Y; Bureau of Public Health Laboratories, Division of Disease Control and Health Protection, Florida Department of Health, Jacksonville, FL, USA., Tarigopula N; Bureau of Public Health Laboratories, Division of Disease Control and Health Protection, Florida Department of Health, Jacksonville, FL, USA., Tekin O; Bureau of Public Health Laboratories, Division of Disease Control and Health Protection, Florida Department of Health, Jacksonville, FL, USA., Schmedes S; Bureau of Public Health Laboratories, Division of Disease Control and Health Protection, Florida Department of Health, Jacksonville, FL, USA., Bunch S; Bureau of Public Health Laboratories, Division of Disease Control and Health Protection, Florida Department of Health, Tampa, FL, USA., Cano N; Bureau of Public Health Laboratories, Division of Disease Control and Health Protection, Florida Department of Health, Tampa, FL, USA., Jaber R; Bureau of Public Health Laboratories, Division of Disease Control and Health Protection, Florida Department of Health, Tampa, FL, USA., Panzera C; Bureau of Public Health Laboratories, Division of Disease Control and Health Protection, Florida Department of Health, Tampa, FL, USA., Stryker I; Bureau of Public Health Laboratories, Division of Disease Control and Health Protection, Florida Department of Health, Tampa, FL, USA., Vergara J; Bureau of Public Health Laboratories, Division of Disease Control and Health Protection, Florida Department of Health, Tampa, FL, USA., Zimler R; Bureau of Epidemiology, Division of Disease Control and Health Protection, Florida Department of Health, Tallahassee, FL, USA., Kopp E; Bureau of Public Health Laboratories, Division of Disease Control and Health Protection, Florida Department of Health, Tampa, FL, USA., Heberlein L; Bureau of Public Health Laboratories, Division of Disease Control and Health Protection, Florida Department of Health, Tampa, FL, USA., Herzog KS; Department of Epidemiology, University of Nebraska Medical Center, Omaha, Nebraska, USA., Fauver JR; Department of Epidemiology, University of Nebraska Medical Center, Omaha, Nebraska, USA., Morrison AM; Bureau of Epidemiology, Division of Disease Control and Health Protection, Florida Department of Health, Tallahassee, FL, USA., Michael SF; Department of Biological Sciences, College of Arts and Sciences, Florida Gulf Coast University, Fort Myers, Florida, USA., Grubaugh ND; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, Connecticut, USA. nathan.grubaugh@yale.edu.; Yale Institute for Global Health, Yale University, New Haven, Connecticut, USA. nathan.grubaugh@yale.edu.; Department of Ecology and Evolutionary Biology, Yale University, New Haven, Connecticut, USA. nathan.grubaugh@yale.edu.; Public Health Modeling Unit, Yale School of Public Health, New Haven, Connecticut, USA. nathan.grubaugh@yale.edu.
Source: BMC genomics [BMC Genomics] 2024 May 01; Vol. 25 (1), pp. 433. Date of Electronic Publication: 2024 May 01.
Publication Type: Journal Article
Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 100965258 Publication Model: Electronic Cited Medium: Internet ISSN: 1471-2164 (Electronic) Linking ISSN: 14712164 NLM ISO Abbreviation: BMC Genomics Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: DengueSeq: a pan-serotype whole genome amplicon sequencing protocol for dengue virus.
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  Data: <searchLink fieldCode="AU" term="%22Vogels+CBF%22">Vogels CBF</searchLink>; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, Connecticut, USA. chantal.vogels@yale.edu.; Yale Institute for Global Health, Yale University, New Haven, Connecticut, USA. chantal.vogels@yale.edu.<br /><searchLink fieldCode="AU" term="%22Hill+V%22">Hill V</searchLink>; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, Connecticut, USA.<br /><searchLink fieldCode="AU" term="%22Breban+MI%22">Breban MI</searchLink>; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, Connecticut, USA.<br /><searchLink fieldCode="AU" term="%22Chaguza+C%22">Chaguza C</searchLink>; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, Connecticut, USA.; Yale Institute for Global Health, Yale University, New Haven, Connecticut, USA.<br /><searchLink fieldCode="AU" term="%22Paul+LM%22">Paul LM</searchLink>; Department of Biological Sciences, College of Arts and Sciences, Florida Gulf Coast University, Fort Myers, Florida, USA.<br /><searchLink fieldCode="AU" term="%22Sodeinde+A%22">Sodeinde A</searchLink>; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, Connecticut, USA.<br /><searchLink fieldCode="AU" term="%22Taylor-Salmon+E%22">Taylor-Salmon E</searchLink>; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, Connecticut, USA.; Department of Pediatrics, Yale School of Medicine, New Haven, Connecticut, USA.<br /><searchLink fieldCode="AU" term="%22Ott+IM%22">Ott IM</searchLink>; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, Connecticut, USA.<br /><searchLink fieldCode="AU" term="%22Petrone+ME%22">Petrone ME</searchLink>; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, Connecticut, USA.; Sydney Institute for Infectious Diseases, School of Medical Sciences, University of Sydney, Sydney, NSW, Australia.<br /><searchLink fieldCode="AU" term="%22Dijk+D%22">Dijk D</searchLink>; Department of Medical Microbiology & Infection Prevention, Amsterdam UMC Location AMC, Amsterdam, The Netherlands.<br /><searchLink fieldCode="AU" term="%22Jonges+M%22">Jonges M</searchLink>; Department of Medical Microbiology & Infection Prevention, Amsterdam UMC Location AMC, Amsterdam, The Netherlands.<br /><searchLink fieldCode="AU" term="%22Welkers+MRA%22">Welkers MRA</searchLink>; Department of Medical Microbiology & Infection Prevention, Amsterdam UMC Location AMC, Amsterdam, The Netherlands.; Department of Infectious Diseases, Public Health Service of Amsterdam, Amsterdam, The Netherlands.<br /><searchLink fieldCode="AU" term="%22Locksmith+T%22">Locksmith T</searchLink>; Bureau of Public Health Laboratories, Division of Disease Control and Health Protection, Florida Department of Health, Tampa, FL, USA.<br /><searchLink fieldCode="AU" term="%22Dong+Y%22">Dong Y</searchLink>; Bureau of Public Health Laboratories, Division of Disease Control and Health Protection, Florida Department of Health, Jacksonville, FL, USA.<br /><searchLink fieldCode="AU" term="%22Tarigopula+N%22">Tarigopula N</searchLink>; Bureau of Public Health Laboratories, Division of Disease Control and Health Protection, Florida Department of Health, Jacksonville, FL, USA.<br /><searchLink fieldCode="AU" term="%22Tekin+O%22">Tekin O</searchLink>; Bureau of Public Health Laboratories, Division of Disease Control and Health Protection, Florida Department of Health, Jacksonville, FL, USA.<br /><searchLink fieldCode="AU" term="%22Schmedes+S%22">Schmedes S</searchLink>; Bureau of Public Health Laboratories, Division of Disease Control and Health Protection, Florida Department of Health, Jacksonville, FL, USA.<br /><searchLink fieldCode="AU" term="%22Bunch+S%22">Bunch S</searchLink>; Bureau of Public Health Laboratories, Division of Disease Control and Health Protection, Florida Department of Health, Tampa, FL, USA.<br /><searchLink fieldCode="AU" term="%22Cano+N%22">Cano N</searchLink>; Bureau of Public Health Laboratories, Division of Disease Control and Health Protection, Florida Department of Health, Tampa, FL, USA.<br /><searchLink fieldCode="AU" term="%22Jaber+R%22">Jaber R</searchLink>; Bureau of Public Health Laboratories, Division of Disease Control and Health Protection, Florida Department of Health, Tampa, FL, USA.<br /><searchLink fieldCode="AU" term="%22Panzera+C%22">Panzera C</searchLink>; Bureau of Public Health Laboratories, Division of Disease Control and Health Protection, Florida Department of Health, Tampa, FL, USA.<br /><searchLink fieldCode="AU" term="%22Stryker+I%22">Stryker I</searchLink>; Bureau of Public Health Laboratories, Division of Disease Control and Health Protection, Florida Department of Health, Tampa, FL, USA.<br /><searchLink fieldCode="AU" term="%22Vergara+J%22">Vergara J</searchLink>; Bureau of Public Health Laboratories, Division of Disease Control and Health Protection, Florida Department of Health, Tampa, FL, USA.<br /><searchLink fieldCode="AU" term="%22Zimler+R%22">Zimler R</searchLink>; Bureau of Epidemiology, Division of Disease Control and Health Protection, Florida Department of Health, Tallahassee, FL, USA.<br /><searchLink fieldCode="AU" term="%22Kopp+E%22">Kopp E</searchLink>; Bureau of Public Health Laboratories, Division of Disease Control and Health Protection, Florida Department of Health, Tampa, FL, USA.<br /><searchLink fieldCode="AU" term="%22Heberlein+L%22">Heberlein L</searchLink>; Bureau of Public Health Laboratories, Division of Disease Control and Health Protection, Florida Department of Health, Tampa, FL, USA.<br /><searchLink fieldCode="AU" term="%22Herzog+KS%22">Herzog KS</searchLink>; Department of Epidemiology, University of Nebraska Medical Center, Omaha, Nebraska, USA.<br /><searchLink fieldCode="AU" term="%22Fauver+JR%22">Fauver JR</searchLink>; Department of Epidemiology, University of Nebraska Medical Center, Omaha, Nebraska, USA.<br /><searchLink fieldCode="AU" term="%22Morrison+AM%22">Morrison AM</searchLink>; Bureau of Epidemiology, Division of Disease Control and Health Protection, Florida Department of Health, Tallahassee, FL, USA.<br /><searchLink fieldCode="AU" term="%22Michael+SF%22">Michael SF</searchLink>; Department of Biological Sciences, College of Arts and Sciences, Florida Gulf Coast University, Fort Myers, Florida, USA.<br /><searchLink fieldCode="AU" term="%22Grubaugh+ND%22">Grubaugh ND</searchLink>; Department of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, Connecticut, USA. nathan.grubaugh@yale.edu.; Yale Institute for Global Health, Yale University, New Haven, Connecticut, USA. nathan.grubaugh@yale.edu.; Department of Ecology and Evolutionary Biology, Yale University, New Haven, Connecticut, USA. nathan.grubaugh@yale.edu.; Public Health Modeling Unit, Yale School of Public Health, New Haven, Connecticut, USA. nathan.grubaugh@yale.edu.
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  Data: <searchLink fieldCode="JN" term="%22100965258%22">BMC genomics</searchLink> [BMC Genomics] 2024 May 01; Vol. 25 (1), pp. 433. <i>Date of Electronic Publication: </i>2024 May 01.
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