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ViralFlow v1.0-a computational workflow for streamlining viral genomic surveillance.

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Title: ViralFlow v1.0-a computational workflow for streamlining viral genomic surveillance.
Authors: da Silva AF; Departamento de Entomologia, Instituto Aggeu Magalhães (IAM)-Fundação Oswaldo Cruz-FIOCRUZ, Recife, Pernambuco 50670-420, Brazil.; Núcleo de Bioinformática (NBI), Instituto Aggeu Magalhães (IAM)-Fundação Oswaldo Cruz-FIOCRUZ, Recife, Pernambuco 50670-420, Brazil., da Silva Neto AM; Data Analysis and Engineering, Genomic Surveillance Unit, Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridgeshire CB10 1SA, UK., Aksenen CF; Fundação Oswaldo Cruz (Fiocruz) - Fiocruz-CE, Eusebio, Ceará 61760-000, Brazil., Jeronimo PMC; Fundação Oswaldo Cruz (Fiocruz) - Fiocruz-CE, Eusebio, Ceará 61760-000, Brazil., Dezordi FZ; Departamento de Entomologia, Instituto Aggeu Magalhães (IAM)-Fundação Oswaldo Cruz-FIOCRUZ, Recife, Pernambuco 50670-420, Brazil.; Núcleo de Bioinformática (NBI), Instituto Aggeu Magalhães (IAM)-Fundação Oswaldo Cruz-FIOCRUZ, Recife, Pernambuco 50670-420, Brazil., Almeida SP; Fundação Oswaldo Cruz (Fiocruz) - Fiocruz-CE, Eusebio, Ceará 61760-000, Brazil., Costa HMP; Núcleo de Bioinformática (NBI), Instituto Aggeu Magalhães (IAM)-Fundação Oswaldo Cruz-FIOCRUZ, Recife, Pernambuco 50670-420, Brazil., Salvato RS; Secretaria Estadual da Saúde do Rio Grande do Sul, Centro Estadual de Vigilância em Saúde, Laboratório Central de Saúde Pública, Porto Alegre, Rio Grande do Sul 90450-190, Brazil., Campos TL; Núcleo de Bioinformática (NBI), Instituto Aggeu Magalhães (IAM)-Fundação Oswaldo Cruz-FIOCRUZ, Recife, Pernambuco 50670-420, Brazil., Wallau GDL; Departamento de Entomologia, Instituto Aggeu Magalhães (IAM)-Fundação Oswaldo Cruz-FIOCRUZ, Recife, Pernambuco 50670-420, Brazil.; Núcleo de Bioinformática (NBI), Instituto Aggeu Magalhães (IAM)-Fundação Oswaldo Cruz-FIOCRUZ, Recife, Pernambuco 50670-420, Brazil.; Department of Arbovirology, Bernhard Nocht Institute for Tropical Medicine, WHO Collaborating Center for Arbovirus and Hemorrhagic Fever Reference and Research, National Reference Center for Tropical Infectious Diseases, Bernhard-Nocht-Strasse 74, D-20359 Hamburg, Germany., Of The Fiocruz Genomic Network OB
Source: NAR genomics and bioinformatics [NAR Genom Bioinform] 2024 May 25; Vol. 6 (2), pp. lqae056. Date of Electronic Publication: 2024 May 25 (Print Publication: 2024).
Publication Type: Journal Article
Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 101756213 Publication Model: eCollection Cited Medium: Internet ISSN: 2631-9268 (Electronic) Linking ISSN: 26319268 NLM ISO Abbreviation: NAR Genom Bioinform Subsets: PubMed not MEDLINE
Database: MEDLINE Ultimate
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  Data: ViralFlow v1.0-a computational workflow for streamlining viral genomic surveillance.
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  Data: <searchLink fieldCode="AU" term="%22da+Silva+AF%22">da Silva AF</searchLink>; Departamento de Entomologia, Instituto Aggeu Magalhães (IAM)-Fundação Oswaldo Cruz-FIOCRUZ, Recife, Pernambuco 50670-420, Brazil.; Núcleo de Bioinformática (NBI), Instituto Aggeu Magalhães (IAM)-Fundação Oswaldo Cruz-FIOCRUZ, Recife, Pernambuco 50670-420, Brazil.<br /><searchLink fieldCode="AU" term="%22da+Silva+Neto+AM%22">da Silva Neto AM</searchLink>; Data Analysis and Engineering, Genomic Surveillance Unit, Wellcome Sanger Institute, Wellcome Genome Campus, Hinxton, Cambridgeshire CB10 1SA, UK.<br /><searchLink fieldCode="AU" term="%22Aksenen+CF%22">Aksenen CF</searchLink>; Fundação Oswaldo Cruz (Fiocruz) - Fiocruz-CE, Eusebio, Ceará 61760-000, Brazil.<br /><searchLink fieldCode="AU" term="%22Jeronimo+PMC%22">Jeronimo PMC</searchLink>; Fundação Oswaldo Cruz (Fiocruz) - Fiocruz-CE, Eusebio, Ceará 61760-000, Brazil.<br /><searchLink fieldCode="AU" term="%22Dezordi+FZ%22">Dezordi FZ</searchLink>; Departamento de Entomologia, Instituto Aggeu Magalhães (IAM)-Fundação Oswaldo Cruz-FIOCRUZ, Recife, Pernambuco 50670-420, Brazil.; Núcleo de Bioinformática (NBI), Instituto Aggeu Magalhães (IAM)-Fundação Oswaldo Cruz-FIOCRUZ, Recife, Pernambuco 50670-420, Brazil.<br /><searchLink fieldCode="AU" term="%22Almeida+SP%22">Almeida SP</searchLink>; Fundação Oswaldo Cruz (Fiocruz) - Fiocruz-CE, Eusebio, Ceará 61760-000, Brazil.<br /><searchLink fieldCode="AU" term="%22Costa+HMP%22">Costa HMP</searchLink>; Núcleo de Bioinformática (NBI), Instituto Aggeu Magalhães (IAM)-Fundação Oswaldo Cruz-FIOCRUZ, Recife, Pernambuco 50670-420, Brazil.<br /><searchLink fieldCode="AU" term="%22Salvato+RS%22">Salvato RS</searchLink>; Secretaria Estadual da Saúde do Rio Grande do Sul, Centro Estadual de Vigilância em Saúde, Laboratório Central de Saúde Pública, Porto Alegre, Rio Grande do Sul 90450-190, Brazil.<br /><searchLink fieldCode="AU" term="%22Campos+TL%22">Campos TL</searchLink>; Núcleo de Bioinformática (NBI), Instituto Aggeu Magalhães (IAM)-Fundação Oswaldo Cruz-FIOCRUZ, Recife, Pernambuco 50670-420, Brazil.<br /><searchLink fieldCode="AU" term="%22Wallau+GDL%22">Wallau GDL</searchLink>; Departamento de Entomologia, Instituto Aggeu Magalhães (IAM)-Fundação Oswaldo Cruz-FIOCRUZ, Recife, Pernambuco 50670-420, Brazil.; Núcleo de Bioinformática (NBI), Instituto Aggeu Magalhães (IAM)-Fundação Oswaldo Cruz-FIOCRUZ, Recife, Pernambuco 50670-420, Brazil.; Department of Arbovirology, Bernhard Nocht Institute for Tropical Medicine, WHO Collaborating Center for Arbovirus and Hemorrhagic Fever Reference and Research, National Reference Center for Tropical Infectious Diseases, Bernhard-Nocht-Strasse 74, D-20359 Hamburg, Germany.<br /><searchLink fieldCode="AU" term="%22Of+The+Fiocruz+Genomic+Network+OB%22">Of The Fiocruz Genomic Network OB</searchLink>
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  Data: <searchLink fieldCode="JN" term="%22101756213%22">NAR genomics and bioinformatics</searchLink> [NAR Genom Bioinform] 2024 May 25; Vol. 6 (2), pp. lqae056. <i>Date of Electronic Publication: </i>2024 May 25 (<i>Print Publication: </i>2024).
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  Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22Oxford+University+Press%22">Oxford University Press </searchLink><i>Country of Publication: </i>England <i>NLM ID: </i>101756213 <i>Publication Model: </i>eCollection <i>Cited Medium: </i>Internet <i>ISSN: </i>2631-9268 (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2226319268%22">26319268 </searchLink><i>NLM ISO Abbreviation: </i>NAR Genom Bioinform <i>Subsets: </i>PubMed not MEDLINE
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