Ultrasensitive plasma-based monitoring of tumor burden using machine-learning-guided signal enrichment.
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| Title: | Ultrasensitive plasma-based monitoring of tumor burden using machine-learning-guided signal enrichment. |
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| Authors: | Widman AJ; New York Genome Center, New York, NY, USA. widmana@mskcc.org.; Memorial Sloan Kettering Cancer Center, New York, NY, USA. widmana@mskcc.org., Shah M; New York Genome Center, New York, NY, USA., Frydendahl A; Department of Molecular Medicine, Aarhus University Hospital, Aarhus, Denmark.; Department of Clinical Medicine, Aarhus University, Aarhus, Denmark., Halmos D; New York Genome Center, New York, NY, USA.; Weill Cornell Medicine, New York, NY, USA., Khamnei CC; New York Genome Center, New York, NY, USA.; Weill Cornell Medicine, New York, NY, USA., Øgaard N; Department of Molecular Medicine, Aarhus University Hospital, Aarhus, Denmark.; Department of Clinical Medicine, Aarhus University, Aarhus, Denmark., Rajagopalan S; New York Genome Center, New York, NY, USA.; Weill Cornell Medicine, New York, NY, USA., Arora A; New York Genome Center, New York, NY, USA.; Weill Cornell Medicine, New York, NY, USA., Deshpande A; New York Genome Center, New York, NY, USA.; Weill Cornell Medicine, New York, NY, USA., Hooper WF; New York Genome Center, New York, NY, USA., Quentin J; New York Genome Center, New York, NY, USA.; Weill Cornell Medicine, New York, NY, USA., Bass J; New York Genome Center, New York, NY, USA.; Weill Cornell Medicine, New York, NY, USA., Zhang M; New York Genome Center, New York, NY, USA.; Weill Cornell Medicine, New York, NY, USA., Langanay T; New York Genome Center, New York, NY, USA.; Weill Cornell Medicine, New York, NY, USA., Andersen L; Department of Molecular Medicine, Aarhus University Hospital, Aarhus, Denmark.; Department of Clinical Medicine, Aarhus University, Aarhus, Denmark., Steinsnyder Z; New York Genome Center, New York, NY, USA., Liao W; New York Genome Center, New York, NY, USA., Rasmussen MH; Department of Molecular Medicine, Aarhus University Hospital, Aarhus, Denmark.; Department of Clinical Medicine, Aarhus University, Aarhus, Denmark., Henriksen TV; Department of Molecular Medicine, Aarhus University Hospital, Aarhus, Denmark.; Department of Clinical Medicine, Aarhus University, Aarhus, Denmark., Jensen SØ; Department of Molecular Medicine, Aarhus University Hospital, Aarhus, Denmark.; Department of Clinical Medicine, Aarhus University, Aarhus, Denmark., Nors J; Department of Molecular Medicine, Aarhus University Hospital, Aarhus, Denmark.; Department of Clinical Medicine, Aarhus University, Aarhus, Denmark., Therkildsen C; Gastro Unit, Copenhagen University Hospital, Amager - Hvidovre Hospital, Hvidovre, Denmark., Sotelo J; New York Genome Center, New York, NY, USA.; Weill Cornell Medicine, New York, NY, USA., Brand R; New York Genome Center, New York, NY, USA.; Weill Cornell Medicine, New York, NY, USA., Schiffman JS; New York Genome Center, New York, NY, USA.; Weill Cornell Medicine, New York, NY, USA., Shah RH; Memorial Sloan Kettering Cancer Center, New York, NY, USA., Cheng AP; New York Genome Center, New York, NY, USA.; Weill Cornell Medicine, New York, NY, USA., Maher C; Memorial Sloan Kettering Cancer Center, New York, NY, USA.; Parker Institute for Cancer Immunotherapy, San Francisco, CA, USA., Spain L; Cancer Dynamics Laboratory, The Francis Crick Institute, London, UK.; Renal and Skin Unit, The Royal Marsden NHS Foundation Trust, London, UK., Krause K; Mass General Cancer Center, Massachusetts General Hospital, Boston, MA, USA., Frederick DT; Mass General Cancer Center, Massachusetts General Hospital, Boston, MA, USA., den Brok W; Department of Medical Oncology, BC Cancer Agency, Vancouver, British Columbia, Canada., Lohrisch C; Department of Medical Oncology, BC Cancer Agency, Vancouver, British Columbia, Canada., Shenkier T; Department of Medical Oncology, BC Cancer Agency, Vancouver, British Columbia, Canada., Simmons C; Department of Medical Oncology, BC Cancer Agency, Vancouver, British Columbia, Canada., Villa D; Department of Medical Oncology, BC Cancer Agency, Vancouver, British Columbia, Canada., Mungall AJ; Michael Smith Genome Sciences Centre, Vancouver, British Columbia, Canada., Moore R; Michael Smith Genome Sciences Centre, Vancouver, British Columbia, Canada., Zaikova E; Department of Molecular Oncology, BC Cancer Agency, Vancouver, British Columbia, Canada., Cerda V; Department of Molecular Oncology, BC Cancer Agency, Vancouver, British Columbia, Canada., Kong E; Department of Molecular Oncology, BC Cancer Agency, Vancouver, British Columbia, Canada., Lai D; Department of Molecular Oncology, BC Cancer Agency, Vancouver, British Columbia, Canada., Malbari MS; Weill Cornell Medicine, New York, NY, USA., Marton M; New York Genome Center, New York, NY, USA., Manaa D; New York Genome Center, New York, NY, USA., Winterkorn L; New York Genome Center, New York, NY, USA., Gelmon K; Department of Medical Oncology, BC Cancer Agency, Vancouver, British Columbia, Canada., Callahan MK; Memorial Sloan Kettering Cancer Center, New York, NY, USA., Boland G; Mass General Cancer Center, Massachusetts General Hospital, Boston, MA, USA., Potenski C; New York Genome Center, New York, NY, USA.; Weill Cornell Medicine, New York, NY, USA., Wolchok JD; Memorial Sloan Kettering Cancer Center, New York, NY, USA., Saxena A; Weill Cornell Medicine, New York, NY, USA., Turajlic S; Cancer Dynamics Laboratory, The Francis Crick Institute, London, UK.; Renal and Skin Unit, The Royal Marsden NHS Foundation Trust, London, UK., Imielinski M; New York Genome Center, New York, NY, USA.; Perlmutter Cancer Center, NYU Grossman School of Medicine, New York, NY, USA., Berger MF; Memorial Sloan Kettering Cancer Center, New York, NY, USA., Aparicio S; Department of Molecular Oncology, BC Cancer Agency, Vancouver, British Columbia, Canada.; Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, British Columbia, Canada., Altorki NK; Weill Cornell Medicine, New York, NY, USA., Postow MA; Memorial Sloan Kettering Cancer Center, New York, NY, USA.; Weill Cornell Medicine, New York, NY, USA., Robine N; New York Genome Center, New York, NY, USA., Andersen CL; Department of Molecular Medicine, Aarhus University Hospital, Aarhus, Denmark.; Department of Clinical Medicine, Aarhus University, Aarhus, Denmark., Landau DA; New York Genome Center, New York, NY, USA. dlandau@nygenome.org.; Weill Cornell Medicine, New York, NY, USA. dlandau@nygenome.org. |
| Source: | Nature medicine [Nat Med] 2024 Jun; Vol. 30 (6), pp. 1655-1666. Date of Electronic Publication: 2024 Jun 14. |
| Publication Type: | Journal Article; Research Support, N.I.H., Extramural; Research Support, Non-U.S. Gov't |
| Journal Info: | Publisher: Nature Publishing Company Country of Publication: United States NLM ID: 9502015 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1546-170X (Electronic) Linking ISSN: 10788956 NLM ISO Abbreviation: Nat Med Subsets: MEDLINE |
| Database: | MEDLINE Ultimate |
| FullText | Text: Availability: 0 |
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| Header | DbId: mdl DbLabel: MEDLINE Ultimate An: 38877116 AccessLevel: 2 PubType: Academic Journal PubTypeId: academicJournal PreciseRelevancyScore: 0 |
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| Items | – Name: Title Label: Title Group: Ti Data: Ultrasensitive plasma-based monitoring of tumor burden using machine-learning-guided signal enrichment. – Name: Author Label: Authors Group: Au Data: <searchLink fieldCode="AU" term="%22Widman+AJ%22">Widman AJ</searchLink>; New York Genome Center, New York, NY, USA. widmana@mskcc.org.; Memorial Sloan Kettering Cancer Center, New York, NY, USA. widmana@mskcc.org.<br /><searchLink fieldCode="AU" term="%22Shah+M%22">Shah M</searchLink>; New York Genome Center, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Frydendahl+A%22">Frydendahl A</searchLink>; Department of Molecular Medicine, Aarhus University Hospital, Aarhus, Denmark.; Department of Clinical Medicine, Aarhus University, Aarhus, Denmark.<br /><searchLink fieldCode="AU" term="%22Halmos+D%22">Halmos D</searchLink>; New York Genome Center, New York, NY, USA.; Weill Cornell Medicine, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Khamnei+CC%22">Khamnei CC</searchLink>; New York Genome Center, New York, NY, USA.; Weill Cornell Medicine, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Øgaard+N%22">Øgaard N</searchLink>; Department of Molecular Medicine, Aarhus University Hospital, Aarhus, Denmark.; Department of Clinical Medicine, Aarhus University, Aarhus, Denmark.<br /><searchLink fieldCode="AU" term="%22Rajagopalan+S%22">Rajagopalan S</searchLink>; New York Genome Center, New York, NY, USA.; Weill Cornell Medicine, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Arora+A%22">Arora A</searchLink>; New York Genome Center, New York, NY, USA.; Weill Cornell Medicine, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Deshpande+A%22">Deshpande A</searchLink>; New York Genome Center, New York, NY, USA.; Weill Cornell Medicine, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Hooper+WF%22">Hooper WF</searchLink>; New York Genome Center, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Quentin+J%22">Quentin J</searchLink>; New York Genome Center, New York, NY, USA.; Weill Cornell Medicine, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Bass+J%22">Bass J</searchLink>; New York Genome Center, New York, NY, USA.; Weill Cornell Medicine, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Zhang+M%22">Zhang M</searchLink>; New York Genome Center, New York, NY, USA.; Weill Cornell Medicine, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Langanay+T%22">Langanay T</searchLink>; New York Genome Center, New York, NY, USA.; Weill Cornell Medicine, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Andersen+L%22">Andersen L</searchLink>; Department of Molecular Medicine, Aarhus University Hospital, Aarhus, Denmark.; Department of Clinical Medicine, Aarhus University, Aarhus, Denmark.<br /><searchLink fieldCode="AU" term="%22Steinsnyder+Z%22">Steinsnyder Z</searchLink>; New York Genome Center, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Liao+W%22">Liao W</searchLink>; New York Genome Center, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Rasmussen+MH%22">Rasmussen MH</searchLink>; Department of Molecular Medicine, Aarhus University Hospital, Aarhus, Denmark.; Department of Clinical Medicine, Aarhus University, Aarhus, Denmark.<br /><searchLink fieldCode="AU" term="%22Henriksen+TV%22">Henriksen TV</searchLink>; Department of Molecular Medicine, Aarhus University Hospital, Aarhus, Denmark.; Department of Clinical Medicine, Aarhus University, Aarhus, Denmark.<br /><searchLink fieldCode="AU" term="%22Jensen+SØ%22">Jensen SØ</searchLink>; Department of Molecular Medicine, Aarhus University Hospital, Aarhus, Denmark.; Department of Clinical Medicine, Aarhus University, Aarhus, Denmark.<br /><searchLink fieldCode="AU" term="%22Nors+J%22">Nors J</searchLink>; Department of Molecular Medicine, Aarhus University Hospital, Aarhus, Denmark.; Department of Clinical Medicine, Aarhus University, Aarhus, Denmark.<br /><searchLink fieldCode="AU" term="%22Therkildsen+C%22">Therkildsen C</searchLink>; Gastro Unit, Copenhagen University Hospital, Amager - Hvidovre Hospital, Hvidovre, Denmark.<br /><searchLink fieldCode="AU" term="%22Sotelo+J%22">Sotelo J</searchLink>; New York Genome Center, New York, NY, USA.; Weill Cornell Medicine, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Brand+R%22">Brand R</searchLink>; New York Genome Center, New York, NY, USA.; Weill Cornell Medicine, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Schiffman+JS%22">Schiffman JS</searchLink>; New York Genome Center, New York, NY, USA.; Weill Cornell Medicine, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Shah+RH%22">Shah RH</searchLink>; Memorial Sloan Kettering Cancer Center, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Cheng+AP%22">Cheng AP</searchLink>; New York Genome Center, New York, NY, USA.; Weill Cornell Medicine, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Maher+C%22">Maher C</searchLink>; Memorial Sloan Kettering Cancer Center, New York, NY, USA.; Parker Institute for Cancer Immunotherapy, San Francisco, CA, USA.<br /><searchLink fieldCode="AU" term="%22Spain+L%22">Spain L</searchLink>; Cancer Dynamics Laboratory, The Francis Crick Institute, London, UK.; Renal and Skin Unit, The Royal Marsden NHS Foundation Trust, London, UK.<br /><searchLink fieldCode="AU" term="%22Krause+K%22">Krause K</searchLink>; Mass General Cancer Center, Massachusetts General Hospital, Boston, MA, USA.<br /><searchLink fieldCode="AU" term="%22Frederick+DT%22">Frederick DT</searchLink>; Mass General Cancer Center, Massachusetts General Hospital, Boston, MA, USA.<br /><searchLink fieldCode="AU" term="%22den+Brok+W%22">den Brok W</searchLink>; Department of Medical Oncology, BC Cancer Agency, Vancouver, British Columbia, Canada.<br /><searchLink fieldCode="AU" term="%22Lohrisch+C%22">Lohrisch C</searchLink>; Department of Medical Oncology, BC Cancer Agency, Vancouver, British Columbia, Canada.<br /><searchLink fieldCode="AU" term="%22Shenkier+T%22">Shenkier T</searchLink>; Department of Medical Oncology, BC Cancer Agency, Vancouver, British Columbia, Canada.<br /><searchLink fieldCode="AU" term="%22Simmons+C%22">Simmons C</searchLink>; Department of Medical Oncology, BC Cancer Agency, Vancouver, British Columbia, Canada.<br /><searchLink fieldCode="AU" term="%22Villa+D%22">Villa D</searchLink>; Department of Medical Oncology, BC Cancer Agency, Vancouver, British Columbia, Canada.<br /><searchLink fieldCode="AU" term="%22Mungall+AJ%22">Mungall AJ</searchLink>; Michael Smith Genome Sciences Centre, Vancouver, British Columbia, Canada.<br /><searchLink fieldCode="AU" term="%22Moore+R%22">Moore R</searchLink>; Michael Smith Genome Sciences Centre, Vancouver, British Columbia, Canada.<br /><searchLink fieldCode="AU" term="%22Zaikova+E%22">Zaikova E</searchLink>; Department of Molecular Oncology, BC Cancer Agency, Vancouver, British Columbia, Canada.<br /><searchLink fieldCode="AU" term="%22Cerda+V%22">Cerda V</searchLink>; Department of Molecular Oncology, BC Cancer Agency, Vancouver, British Columbia, Canada.<br /><searchLink fieldCode="AU" term="%22Kong+E%22">Kong E</searchLink>; Department of Molecular Oncology, BC Cancer Agency, Vancouver, British Columbia, Canada.<br /><searchLink fieldCode="AU" term="%22Lai+D%22">Lai D</searchLink>; Department of Molecular Oncology, BC Cancer Agency, Vancouver, British Columbia, Canada.<br /><searchLink fieldCode="AU" term="%22Malbari+MS%22">Malbari MS</searchLink>; Weill Cornell Medicine, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Marton+M%22">Marton M</searchLink>; New York Genome Center, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Manaa+D%22">Manaa D</searchLink>; New York Genome Center, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Winterkorn+L%22">Winterkorn L</searchLink>; New York Genome Center, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Gelmon+K%22">Gelmon K</searchLink>; Department of Medical Oncology, BC Cancer Agency, Vancouver, British Columbia, Canada.<br /><searchLink fieldCode="AU" term="%22Callahan+MK%22">Callahan MK</searchLink>; Memorial Sloan Kettering Cancer Center, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Boland+G%22">Boland G</searchLink>; Mass General Cancer Center, Massachusetts General Hospital, Boston, MA, USA.<br /><searchLink fieldCode="AU" term="%22Potenski+C%22">Potenski C</searchLink>; New York Genome Center, New York, NY, USA.; Weill Cornell Medicine, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Wolchok+JD%22">Wolchok JD</searchLink>; Memorial Sloan Kettering Cancer Center, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Saxena+A%22">Saxena A</searchLink>; Weill Cornell Medicine, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Turajlic+S%22">Turajlic S</searchLink>; Cancer Dynamics Laboratory, The Francis Crick Institute, London, UK.; Renal and Skin Unit, The Royal Marsden NHS Foundation Trust, London, UK.<br /><searchLink fieldCode="AU" term="%22Imielinski+M%22">Imielinski M</searchLink>; New York Genome Center, New York, NY, USA.; Perlmutter Cancer Center, NYU Grossman School of Medicine, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Berger+MF%22">Berger MF</searchLink>; Memorial Sloan Kettering Cancer Center, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Aparicio+S%22">Aparicio S</searchLink>; Department of Molecular Oncology, BC Cancer Agency, Vancouver, British Columbia, Canada.; Department of Pathology and Laboratory Medicine, University of British Columbia, Vancouver, British Columbia, Canada.<br /><searchLink fieldCode="AU" term="%22Altorki+NK%22">Altorki NK</searchLink>; Weill Cornell Medicine, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Postow+MA%22">Postow MA</searchLink>; Memorial Sloan Kettering Cancer Center, New York, NY, USA.; Weill Cornell Medicine, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Robine+N%22">Robine N</searchLink>; New York Genome Center, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Andersen+CL%22">Andersen CL</searchLink>; Department of Molecular Medicine, Aarhus University Hospital, Aarhus, Denmark.; Department of Clinical Medicine, Aarhus University, Aarhus, Denmark.<br /><searchLink fieldCode="AU" term="%22Landau+DA%22">Landau DA</searchLink>; 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