Evaluation of somatic copy number variation detection by NGS technologies and bioinformatics tools on a hyper-diploid cancer genome.

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Bibliographic Details
Title: Evaluation of somatic copy number variation detection by NGS technologies and bioinformatics tools on a hyper-diploid cancer genome.
Authors: Masood D; Office of Oncologic Diseases, Office of New Drug, Center for Drug Evaluation and Research, Food and Drug Administration, 10903 New Hampshire Avenue, Silver Spring, 20993, USA., Ren L; State Key Laboratory of Genetic Engineering, Human Phenome Institute, School of Life Sciences and Shanghai Cancer Center, Fudan University, Shanghai, China., Nguyen C; Computational Genomics and Bioinformatics Branch, Center for Biomedical Informatics and Information Technology (CBIIT), National Cancer Institute, Rockville, MD, USA., Brundu FG; Illumina Inc., San Diego, CA, USA., Zheng L; Office of Oncologic Diseases, Office of New Drug, Center for Drug Evaluation and Research, Food and Drug Administration, 10903 New Hampshire Avenue, Silver Spring, 20993, USA., Zhao Y; Sequencing Facility Bioinformatics Group, Biomedical Informatics and Data Science Directorate, Frederick National Laboratory for Cancer Research, Frederick, MD, USA., Jaeger E; Illumina Inc., San Diego, CA, USA., Li Y; Illumina Inc., San Diego, CA, USA., Cha SW; Illumina Inc., San Diego, CA, USA., Halpern A; Illumina Inc., San Diego, CA, USA., Truong S; Illumina Inc., San Diego, CA, USA., Virata M; Illumina Inc., San Diego, CA, USA., Yan C; Computational Genomics and Bioinformatics Branch, Center for Biomedical Informatics and Information Technology (CBIIT), National Cancer Institute, Rockville, MD, USA., Chen Q; Computational Genomics and Bioinformatics Branch, Center for Biomedical Informatics and Information Technology (CBIIT), National Cancer Institute, Rockville, MD, USA., Pang A; Bionano Genomics, San Diego, CA, 20892, USA., Alberto R; Bionano Genomics, San Diego, CA, 20892, USA., Xiao C; National Center for Biotechnology Information, National Librarssy of Medicine, National Institutes of Health, Bethesda, MD, 20892, USA., Yang Z; Center for Genomics, Loma Linda University School of Medicine, Loma Linda, CA, USA., Chen W; Center for Genomics, Loma Linda University School of Medicine, Loma Linda, CA, USA., Wang C; Center for Genomics, Loma Linda University School of Medicine, Loma Linda, CA, USA., Cross F Jr; Office of Oncologic Diseases, Office of New Drug, Center for Drug Evaluation and Research, Food and Drug Administration, 10903 New Hampshire Avenue, Silver Spring, 20993, USA., Catreux S; Illumina Inc., San Diego, CA, USA., Shi L; State Key Laboratory of Genetic Engineering, Human Phenome Institute, School of Life Sciences and Shanghai Cancer Center, Fudan University, Shanghai, China., Beaver JA; Office of Oncologic Diseases, Office of New Drug, Center for Drug Evaluation and Research, Food and Drug Administration, 10903 New Hampshire Avenue, Silver Spring, 20993, USA.; Oncology Center of Excellence, Food and Drug Administration, Silver Spring, MD, USA., Xiao W; Office of Oncologic Diseases, Office of New Drug, Center for Drug Evaluation and Research, Food and Drug Administration, 10903 New Hampshire Avenue, Silver Spring, 20993, USA. wenming.xiao@fda.hhs.gov., Meerzaman DM; Computational Genomics and Bioinformatics Branch, Center for Biomedical Informatics and Information Technology (CBIIT), National Cancer Institute, Rockville, MD, USA. meerzamd@mail.nih.gov.
Source: Genome biology [Genome Biol] 2024 Jun 20; Vol. 25 (1), pp. 163. Date of Electronic Publication: 2024 Jun 20.
Publication Type: Journal Article; Evaluation Study; Research Support, N.I.H., Intramural; Research Support, U.S. Gov't, Non-P.H.S.; Research Support, Non-U.S. Gov't; Research Support, N.I.H., Extramural
Journal Info: Publisher: BioMed Central Ltd Country of Publication: England NLM ID: 100960660 Publication Model: Electronic Cited Medium: Internet ISSN: 1474-760X (Electronic) Linking ISSN: 14747596 NLM ISO Abbreviation: Genome Biol Subsets: MEDLINE
Database: MEDLINE Ultimate
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