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DNA O-MAP uncovers the molecular neighborhoods associated with specific genomic loci.

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Title: DNA O-MAP uncovers the molecular neighborhoods associated with specific genomic loci.
Authors: Liu Y; Department of Genome Sciences, University of Washington, Seattle, WA, USA.; Brotman Bay Institute for Precision Medicine, Seattle, WA, USA.; Molecular and Cellular Biology Program, University of Washington, Seattle, WA, USA.; These authors contributed equally: Yuzhen Liu, Christopher D. McGann, Conor P. Herlihy., McGann CD; Department of Genome Sciences, University of Washington, Seattle, WA, USA.; These authors contributed equally: Yuzhen Liu, Christopher D. McGann, Conor P. Herlihy., Herlihy CP; Department of Genome Sciences, University of Washington, Seattle, WA, USA.; Brotman Bay Institute for Precision Medicine, Seattle, WA, USA.; These authors contributed equally: Yuzhen Liu, Christopher D. McGann, Conor P. Herlihy., Krebs M; Department of Genome Sciences, University of Washington, Seattle, WA, USA.; Brotman Bay Institute for Precision Medicine, Seattle, WA, USA., Perkins TA Jr; Department of Genome Sciences, University of Washington, Seattle, WA, USA., Fields R; Department of Genome Sciences, University of Washington, Seattle, WA, USA., Camplisson CK; Department of Genome Sciences, University of Washington, Seattle, WA, USA.; Brotman Bay Institute for Precision Medicine, Seattle, WA, USA., Nwizugbo DZ; Department of Genome Sciences, University of Washington, Seattle, WA, USA.; Brotman Bay Institute for Precision Medicine, Seattle, WA, USA., Hsu C; Department of Genome Sciences, University of Washington, Seattle, WA, USA.; Brotman Bay Institute for Precision Medicine, Seattle, WA, USA., Avanessian SC; Department of Genome Sciences, University of Washington, Seattle, WA, USA.; Brotman Bay Institute for Precision Medicine, Seattle, WA, USA.; Molecular and Cellular Biology Program, University of Washington, Seattle, WA, USA., Tsue AF; Brotman Bay Institute for Precision Medicine, Seattle, WA, USA.; Department of Pharmacology, University of Washington, Seattle, WA, USA.; Institute of Stem Cell and Regenerative Medicine, University of Washington, USA., Kania EE; Brotman Bay Institute for Precision Medicine, Seattle, WA, USA.; Department of Pharmacology, University of Washington, Seattle, WA, USA.; Institute of Stem Cell and Regenerative Medicine, University of Washington, USA., Shechner DM; Brotman Bay Institute for Precision Medicine, Seattle, WA, USA.; Department of Pharmacology, University of Washington, Seattle, WA, USA.; Institute of Stem Cell and Regenerative Medicine, University of Washington, USA., Beliveau BJ; Department of Genome Sciences, University of Washington, Seattle, WA, USA.; Brotman Bay Institute for Precision Medicine, Seattle, WA, USA.; Institute of Stem Cell and Regenerative Medicine, University of Washington, USA., Schweppe DK; Department of Genome Sciences, University of Washington, Seattle, WA, USA.; Brotman Bay Institute for Precision Medicine, Seattle, WA, USA.; Institute of Stem Cell and Regenerative Medicine, University of Washington, USA.
Source: BioRxiv : the preprint server for biology [bioRxiv] 2025 Aug 28. Date of Electronic Publication: 2025 Aug 28.
Publication Type: Journal Article; Preprint
Journal Info: Country of Publication: United States NLM ID: 101680187 Publication Model: Electronic Cited Medium: Internet ISSN: 2692-8205 (Electronic) Linking ISSN: 26928205 NLM ISO Abbreviation: bioRxiv Subsets: PubMed not MEDLINE
Database: MEDLINE Ultimate
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PubType: Academic Journal
PubTypeId: academicJournal
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  Data: DNA O-MAP uncovers the molecular neighborhoods associated with specific genomic loci.
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  Data: <searchLink fieldCode="AU" term="%22Liu+Y%22">Liu Y</searchLink>; Department of Genome Sciences, University of Washington, Seattle, WA, USA.; Brotman Bay Institute for Precision Medicine, Seattle, WA, USA.; Molecular and Cellular Biology Program, University of Washington, Seattle, WA, USA.; These authors contributed equally: Yuzhen Liu, Christopher D. McGann, Conor P. Herlihy.<br /><searchLink fieldCode="AU" term="%22McGann+CD%22">McGann CD</searchLink>; Department of Genome Sciences, University of Washington, Seattle, WA, USA.; These authors contributed equally: Yuzhen Liu, Christopher D. McGann, Conor P. Herlihy.<br /><searchLink fieldCode="AU" term="%22Herlihy+CP%22">Herlihy CP</searchLink>; Department of Genome Sciences, University of Washington, Seattle, WA, USA.; Brotman Bay Institute for Precision Medicine, Seattle, WA, USA.; These authors contributed equally: Yuzhen Liu, Christopher D. McGann, Conor P. Herlihy.<br /><searchLink fieldCode="AU" term="%22Krebs+M%22">Krebs M</searchLink>; Department of Genome Sciences, University of Washington, Seattle, WA, USA.; Brotman Bay Institute for Precision Medicine, Seattle, WA, USA.<br /><searchLink fieldCode="AU" term="%22Perkins+TA+Jr%22">Perkins TA Jr</searchLink>; Department of Genome Sciences, University of Washington, Seattle, WA, USA.<br /><searchLink fieldCode="AU" term="%22Fields+R%22">Fields R</searchLink>; Department of Genome Sciences, University of Washington, Seattle, WA, USA.<br /><searchLink fieldCode="AU" term="%22Camplisson+CK%22">Camplisson CK</searchLink>; Department of Genome Sciences, University of Washington, Seattle, WA, USA.; Brotman Bay Institute for Precision Medicine, Seattle, WA, USA.<br /><searchLink fieldCode="AU" term="%22Nwizugbo+DZ%22">Nwizugbo DZ</searchLink>; Department of Genome Sciences, University of Washington, Seattle, WA, USA.; Brotman Bay Institute for Precision Medicine, Seattle, WA, USA.<br /><searchLink fieldCode="AU" term="%22Hsu+C%22">Hsu C</searchLink>; Department of Genome Sciences, University of Washington, Seattle, WA, USA.; Brotman Bay Institute for Precision Medicine, Seattle, WA, USA.<br /><searchLink fieldCode="AU" term="%22Avanessian+SC%22">Avanessian SC</searchLink>; Department of Genome Sciences, University of Washington, Seattle, WA, USA.; Brotman Bay Institute for Precision Medicine, Seattle, WA, USA.; Molecular and Cellular Biology Program, University of Washington, Seattle, WA, USA.<br /><searchLink fieldCode="AU" term="%22Tsue+AF%22">Tsue AF</searchLink>; Brotman Bay Institute for Precision Medicine, Seattle, WA, USA.; Department of Pharmacology, University of Washington, Seattle, WA, USA.; Institute of Stem Cell and Regenerative Medicine, University of Washington, USA.<br /><searchLink fieldCode="AU" term="%22Kania+EE%22">Kania EE</searchLink>; Brotman Bay Institute for Precision Medicine, Seattle, WA, USA.; Department of Pharmacology, University of Washington, Seattle, WA, USA.; Institute of Stem Cell and Regenerative Medicine, University of Washington, USA.<br /><searchLink fieldCode="AU" term="%22Shechner+DM%22">Shechner DM</searchLink>; Brotman Bay Institute for Precision Medicine, Seattle, WA, USA.; Department of Pharmacology, University of Washington, Seattle, WA, USA.; Institute of Stem Cell and Regenerative Medicine, University of Washington, USA.<br /><searchLink fieldCode="AU" term="%22Beliveau+BJ%22">Beliveau BJ</searchLink>; Department of Genome Sciences, University of Washington, Seattle, WA, USA.; Brotman Bay Institute for Precision Medicine, Seattle, WA, USA.; Institute of Stem Cell and Regenerative Medicine, University of Washington, USA.<br /><searchLink fieldCode="AU" term="%22Schweppe+DK%22">Schweppe DK</searchLink>; Department of Genome Sciences, University of Washington, Seattle, WA, USA.; Brotman Bay Institute for Precision Medicine, Seattle, WA, USA.; Institute of Stem Cell and Regenerative Medicine, University of Washington, USA.
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        Value: 10.1101/2024.07.24.604987
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              Text: 2025 Aug 28
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