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bcRflow: a Nextflow pipeline for characterizing B cell receptor repertoires from non-targeted transcriptomic data.

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Title: bcRflow: a Nextflow pipeline for characterizing B cell receptor repertoires from non-targeted transcriptomic data.
Authors: Schlegel BT; Department of Pediatrics, Division of Health Informatics, University of Pittsburgh School of Medicine, UPMC Children's Hospital of Pittsburgh, John G. Rangos Sr. Research Center, 4401 Penn Avenue, Pittsburgh, PA 15224, USA., Morikone M; Department of Pediatrics, Division of Health Informatics, University of Pittsburgh School of Medicine, UPMC Children's Hospital of Pittsburgh, John G. Rangos Sr. Research Center, 4401 Penn Avenue, Pittsburgh, PA 15224, USA., Mu F; Center for Research Computing, University of Pittsburgh, 312 Schenley Place, 4420 Bayard Street, Pittsburgh, PA 15260, USA., Tang WY; Department of Environmental and Occupational Health, University of Pittsburgh, School of Public Health, 130 DeSoto Street, Pittsburgh, PA 15261, USA., Kohanbash G; Department of Neurological Surgery, University of Pittsburgh School of Medicine, UPMC Children's Hospital of Pittsburgh, John G. Rangos Sr. Research Center, 4401 Penn Avenue, Pittsburgh, PA 15224, USA., Rajasundaram D; Department of Pediatrics, Division of Health Informatics, University of Pittsburgh School of Medicine, UPMC Children's Hospital of Pittsburgh, John G. Rangos Sr. Research Center, 4401 Penn Avenue, Pittsburgh, PA 15224, USA.
Source: NAR genomics and bioinformatics [NAR Genom Bioinform] 2024 Oct 15; Vol. 6 (4), pp. lqae137. Date of Electronic Publication: 2024 Oct 15 (Print Publication: 2024).
Publication Type: Journal Article
Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 101756213 Publication Model: eCollection Cited Medium: Internet ISSN: 2631-9268 (Electronic) Linking ISSN: 26319268 NLM ISO Abbreviation: NAR Genom Bioinform Subsets: PubMed not MEDLINE
Database: MEDLINE Ultimate
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  Data: <searchLink fieldCode="AU" term="%22Schlegel+BT%22">Schlegel BT</searchLink>; Department of Pediatrics, Division of Health Informatics, University of Pittsburgh School of Medicine, UPMC Children's Hospital of Pittsburgh, John G. Rangos Sr. Research Center, 4401 Penn Avenue, Pittsburgh, PA 15224, USA.<br /><searchLink fieldCode="AU" term="%22Morikone+M%22">Morikone M</searchLink>; Department of Pediatrics, Division of Health Informatics, University of Pittsburgh School of Medicine, UPMC Children's Hospital of Pittsburgh, John G. Rangos Sr. Research Center, 4401 Penn Avenue, Pittsburgh, PA 15224, USA.<br /><searchLink fieldCode="AU" term="%22Mu+F%22">Mu F</searchLink>; Center for Research Computing, University of Pittsburgh, 312 Schenley Place, 4420 Bayard Street, Pittsburgh, PA 15260, USA.<br /><searchLink fieldCode="AU" term="%22Tang+WY%22">Tang WY</searchLink>; Department of Environmental and Occupational Health, University of Pittsburgh, School of Public Health, 130 DeSoto Street, Pittsburgh, PA 15261, USA.<br /><searchLink fieldCode="AU" term="%22Kohanbash+G%22">Kohanbash G</searchLink>; Department of Neurological Surgery, University of Pittsburgh School of Medicine, UPMC Children's Hospital of Pittsburgh, John G. Rangos Sr. Research Center, 4401 Penn Avenue, Pittsburgh, PA 15224, USA.<br /><searchLink fieldCode="AU" term="%22Rajasundaram+D%22">Rajasundaram D</searchLink>; Department of Pediatrics, Division of Health Informatics, University of Pittsburgh School of Medicine, UPMC Children's Hospital of Pittsburgh, John G. Rangos Sr. Research Center, 4401 Penn Avenue, Pittsburgh, PA 15224, USA.
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  Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22Oxford+University+Press%22">Oxford University Press </searchLink><i>Country of Publication: </i>England <i>NLM ID: </i>101756213 <i>Publication Model: </i>eCollection <i>Cited Medium: </i>Internet <i>ISSN: </i>2631-9268 (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2226319268%22">26319268 </searchLink><i>NLM ISO Abbreviation: </i>NAR Genom Bioinform <i>Subsets: </i>PubMed not MEDLINE
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