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Signatures of lower respiratory tract microbiome in children with severe community-acquired pneumonia using shotgun metagenomic sequencing.

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Title: Signatures of lower respiratory tract microbiome in children with severe community-acquired pneumonia using shotgun metagenomic sequencing.
Authors: Yen TY; Department of Pediatrics, National Taiwan University Hospital, College of Medicine, National Taiwan University, Taipei, Taiwan; Graduate Institute of Clinical Medicine, College of Medicine, National Taiwan University, Taipei, Taiwan., Hsu C; Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei, Taiwan., Lee NC; Department of Pediatrics, National Taiwan University Hospital, College of Medicine, National Taiwan University, Taipei, Taiwan; Department of Medical Genetics, National Taiwan University Hospital, College of Medicine, National Taiwan University, Taipei, Taiwan., Wu CS; Department of Medical Genetics, National Taiwan University Hospital, College of Medicine, National Taiwan University, Taipei, Taiwan., Wang H; Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei, Taiwan., Lee KY; Department of Electrical Engineering, National Taiwan University, Taipei, Taiwan., Lin CR; Department of Pediatrics, National Taiwan University Hospital, College of Medicine, National Taiwan University, Taipei, Taiwan., Lu CY; Department of Pediatrics, National Taiwan University Hospital, College of Medicine, National Taiwan University, Taipei, Taiwan., Tsai ML; Department of Pediatrics, National Taiwan University Hospital, College of Medicine, National Taiwan University, Taipei, Taiwan., Liu TY; Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei, Taiwan; Department of Electrical Engineering, National Taiwan University, Taipei, Taiwan; Smart Medicine and Health Informatics Program, National Taiwan University, Taipei, Taiwan., Lin C; Department of Electrical Engineering, National Taiwan University, Taipei, Taiwan; Smart Medicine and Health Informatics Program, National Taiwan University, Taipei, Taiwan; Center for Advanced Computing and Imaging in Biomedicine, National Taiwan University, Taipei, Taiwan., Chen CY; Smart Medicine and Health Informatics Program, National Taiwan University, Taipei, Taiwan; Center for Advanced Computing and Imaging in Biomedicine, National Taiwan University, Taipei, Taiwan; Department of Biomechatronics Engineering, National Taiwan University, Taipei, Taiwan., Chang LY; Department of Pediatrics, National Taiwan University Hospital, College of Medicine, National Taiwan University, Taipei, Taiwan. Electronic address: lychang@ntu.edu.tw., Lai F; Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei, Taiwan; Department of Electrical Engineering, National Taiwan University, Taipei, Taiwan; Department of Computer Science and Information Engineering, National Taiwan University, Taipei, Taiwan., Huang LM; Department of Pediatrics, National Taiwan University Hospital, College of Medicine, National Taiwan University, Taipei, Taiwan. Electronic address: lmhuang@ntu.edu.tw.
Source: Journal of microbiology, immunology, and infection = Wei mian yu gan ran za zhi [J Microbiol Immunol Infect] 2025 Feb; Vol. 58 (1), pp. 86-93. Date of Electronic Publication: 2024 Nov 29.
Publication Type: Journal Article
Journal Info: Publisher: published by Elsevier for the Taiwan Society of Microbiology Country of Publication: England NLM ID: 100956211 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1995-9133 (Electronic) Linking ISSN: 16841182 NLM ISO Abbreviation: J Microbiol Immunol Infect Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: Signatures of lower respiratory tract microbiome in children with severe community-acquired pneumonia using shotgun metagenomic sequencing.
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  Data: <searchLink fieldCode="AU" term="%22Yen+TY%22">Yen TY</searchLink>; Department of Pediatrics, National Taiwan University Hospital, College of Medicine, National Taiwan University, Taipei, Taiwan; Graduate Institute of Clinical Medicine, College of Medicine, National Taiwan University, Taipei, Taiwan.<br /><searchLink fieldCode="AU" term="%22Hsu+C%22">Hsu C</searchLink>; Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei, Taiwan.<br /><searchLink fieldCode="AU" term="%22Lee+NC%22">Lee NC</searchLink>; Department of Pediatrics, National Taiwan University Hospital, College of Medicine, National Taiwan University, Taipei, Taiwan; Department of Medical Genetics, National Taiwan University Hospital, College of Medicine, National Taiwan University, Taipei, Taiwan.<br /><searchLink fieldCode="AU" term="%22Wu+CS%22">Wu CS</searchLink>; Department of Medical Genetics, National Taiwan University Hospital, College of Medicine, National Taiwan University, Taipei, Taiwan.<br /><searchLink fieldCode="AU" term="%22Wang+H%22">Wang H</searchLink>; Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei, Taiwan.<br /><searchLink fieldCode="AU" term="%22Lee+KY%22">Lee KY</searchLink>; Department of Electrical Engineering, National Taiwan University, Taipei, Taiwan.<br /><searchLink fieldCode="AU" term="%22Lin+CR%22">Lin CR</searchLink>; Department of Pediatrics, National Taiwan University Hospital, College of Medicine, National Taiwan University, Taipei, Taiwan.<br /><searchLink fieldCode="AU" term="%22Lu+CY%22">Lu CY</searchLink>; Department of Pediatrics, National Taiwan University Hospital, College of Medicine, National Taiwan University, Taipei, Taiwan.<br /><searchLink fieldCode="AU" term="%22Tsai+ML%22">Tsai ML</searchLink>; Department of Pediatrics, National Taiwan University Hospital, College of Medicine, National Taiwan University, Taipei, Taiwan.<br /><searchLink fieldCode="AU" term="%22Liu+TY%22">Liu TY</searchLink>; Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei, Taiwan; Department of Electrical Engineering, National Taiwan University, Taipei, Taiwan; Smart Medicine and Health Informatics Program, National Taiwan University, Taipei, Taiwan.<br /><searchLink fieldCode="AU" term="%22Lin+C%22">Lin C</searchLink>; Department of Electrical Engineering, National Taiwan University, Taipei, Taiwan; Smart Medicine and Health Informatics Program, National Taiwan University, Taipei, Taiwan; Center for Advanced Computing and Imaging in Biomedicine, National Taiwan University, Taipei, Taiwan.<br /><searchLink fieldCode="AU" term="%22Chen+CY%22">Chen CY</searchLink>; Smart Medicine and Health Informatics Program, National Taiwan University, Taipei, Taiwan; Center for Advanced Computing and Imaging in Biomedicine, National Taiwan University, Taipei, Taiwan; Department of Biomechatronics Engineering, National Taiwan University, Taipei, Taiwan.<br /><searchLink fieldCode="AU" term="%22Chang+LY%22">Chang LY</searchLink>; Department of Pediatrics, National Taiwan University Hospital, College of Medicine, National Taiwan University, Taipei, Taiwan. Electronic address: lychang@ntu.edu.tw.<br /><searchLink fieldCode="AU" term="%22Lai+F%22">Lai F</searchLink>; Graduate Institute of Biomedical Electronics and Bioinformatics, National Taiwan University, Taipei, Taiwan; Department of Electrical Engineering, National Taiwan University, Taipei, Taiwan; Department of Computer Science and Information Engineering, National Taiwan University, Taipei, Taiwan.<br /><searchLink fieldCode="AU" term="%22Huang+LM%22">Huang LM</searchLink>; Department of Pediatrics, National Taiwan University Hospital, College of Medicine, National Taiwan University, Taipei, Taiwan. Electronic address: lmhuang@ntu.edu.tw.
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  Data: <searchLink fieldCode="JN" term="%22100956211%22">Journal of microbiology, immunology, and infection = Wei mian yu gan ran za zhi</searchLink> [J Microbiol Immunol Infect] 2025 Feb; Vol. 58 (1), pp. 86-93. <i>Date of Electronic Publication: </i>2024 Nov 29.
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  Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22published+by+Elsevier+for+the+Taiwan+Society+of+Microbiology%22">published by Elsevier for the Taiwan Society of Microbiology </searchLink><i>Country of Publication: </i>England <i>NLM ID: </i>100956211 <i>Publication Model: </i>Print-Electronic <i>Cited Medium: </i>Internet <i>ISSN: </i>1995-9133 (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2216841182%22">16841182 </searchLink><i>NLM ISO Abbreviation: </i>J Microbiol Immunol Infect <i>Subsets: </i>MEDLINE
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        Value: 10.1016/j.jmii.2024.11.011
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        Text: English
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              Text: 2025 Feb
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