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Geometric deep learning improves generalizability of MHC-bound peptide predictions.

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Title: Geometric deep learning improves generalizability of MHC-bound peptide predictions.
Authors: Marzella DF; Medical BioSciences department, Radboudumc, Radboud University Medical Center, 6525 GA, Nijmegen, The Netherlands., Crocioni G; Netherlands eScience Center, Amsterdam, The Netherlands., Radusinović T; University of Amsterdam, Amsterdam, The Netherlands., Lepikhov D; Medical BioSciences department, Radboudumc, Radboud University Medical Center, 6525 GA, Nijmegen, The Netherlands., Severin H; Medical BioSciences department, Radboudumc, Radboud University Medical Center, 6525 GA, Nijmegen, The Netherlands., Bodor DL; Netherlands eScience Center, Amsterdam, The Netherlands., Rademaker DT; Medical BioSciences department, Radboudumc, Radboud University Medical Center, 6525 GA, Nijmegen, The Netherlands., Lin C; Netherlands eScience Center, Amsterdam, The Netherlands., Georgievska S; Netherlands eScience Center, Amsterdam, The Netherlands., Renaud N; Netherlands eScience Center, Amsterdam, The Netherlands., Kessler AL; Department of Gastroenterology and Hepatology, Erasmus MC, University Medical Center Rotterdam, 3015 GD, Rotterdam, The Netherlands., Lopez-Tarifa P; Netherlands eScience Center, Amsterdam, The Netherlands., Buschow SI; Department of Gastroenterology and Hepatology, Erasmus MC, University Medical Center Rotterdam, 3015 GD, Rotterdam, The Netherlands., Bekkers E; University of Amsterdam, Amsterdam, The Netherlands., Xue LC; Medical BioSciences department, Radboudumc, Radboud University Medical Center, 6525 GA, Nijmegen, The Netherlands. li.xue@radboudumc.nl.
Source: Communications biology [Commun Biol] 2024 Dec 19; Vol. 7 (1), pp. 1661. Date of Electronic Publication: 2024 Dec 19.
Publication Type: Journal Article; Research Support, Non-U.S. Gov't
Journal Info: Publisher: Nature Publishing Group UK Country of Publication: England NLM ID: 101719179 Publication Model: Electronic Cited Medium: Internet ISSN: 2399-3642 (Electronic) Linking ISSN: 23993642 NLM ISO Abbreviation: Commun Biol Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: Geometric deep learning improves generalizability of MHC-bound peptide predictions.
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  Data: <searchLink fieldCode="AU" term="%22Marzella+DF%22">Marzella DF</searchLink>; Medical BioSciences department, Radboudumc, Radboud University Medical Center, 6525 GA, Nijmegen, The Netherlands.<br /><searchLink fieldCode="AU" term="%22Crocioni+G%22">Crocioni G</searchLink>; Netherlands eScience Center, Amsterdam, The Netherlands.<br /><searchLink fieldCode="AU" term="%22Radusinović+T%22">Radusinović T</searchLink>; University of Amsterdam, Amsterdam, The Netherlands.<br /><searchLink fieldCode="AU" term="%22Lepikhov+D%22">Lepikhov D</searchLink>; Medical BioSciences department, Radboudumc, Radboud University Medical Center, 6525 GA, Nijmegen, The Netherlands.<br /><searchLink fieldCode="AU" term="%22Severin+H%22">Severin H</searchLink>; Medical BioSciences department, Radboudumc, Radboud University Medical Center, 6525 GA, Nijmegen, The Netherlands.<br /><searchLink fieldCode="AU" term="%22Bodor+DL%22">Bodor DL</searchLink>; Netherlands eScience Center, Amsterdam, The Netherlands.<br /><searchLink fieldCode="AU" term="%22Rademaker+DT%22">Rademaker DT</searchLink>; Medical BioSciences department, Radboudumc, Radboud University Medical Center, 6525 GA, Nijmegen, The Netherlands.<br /><searchLink fieldCode="AU" term="%22Lin+C%22">Lin C</searchLink>; Netherlands eScience Center, Amsterdam, The Netherlands.<br /><searchLink fieldCode="AU" term="%22Georgievska+S%22">Georgievska S</searchLink>; Netherlands eScience Center, Amsterdam, The Netherlands.<br /><searchLink fieldCode="AU" term="%22Renaud+N%22">Renaud N</searchLink>; Netherlands eScience Center, Amsterdam, The Netherlands.<br /><searchLink fieldCode="AU" term="%22Kessler+AL%22">Kessler AL</searchLink>; Department of Gastroenterology and Hepatology, Erasmus MC, University Medical Center Rotterdam, 3015 GD, Rotterdam, The Netherlands.<br /><searchLink fieldCode="AU" term="%22Lopez-Tarifa+P%22">Lopez-Tarifa P</searchLink>; Netherlands eScience Center, Amsterdam, The Netherlands.<br /><searchLink fieldCode="AU" term="%22Buschow+SI%22">Buschow SI</searchLink>; Department of Gastroenterology and Hepatology, Erasmus MC, University Medical Center Rotterdam, 3015 GD, Rotterdam, The Netherlands.<br /><searchLink fieldCode="AU" term="%22Bekkers+E%22">Bekkers E</searchLink>; University of Amsterdam, Amsterdam, The Netherlands.<br /><searchLink fieldCode="AU" term="%22Xue+LC%22">Xue LC</searchLink>; Medical BioSciences department, Radboudumc, Radboud University Medical Center, 6525 GA, Nijmegen, The Netherlands. li.xue@radboudumc.nl.
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  Data: <searchLink fieldCode="JN" term="%22101719179%22">Communications biology</searchLink> [Commun Biol] 2024 Dec 19; Vol. 7 (1), pp. 1661. <i>Date of Electronic Publication: </i>2024 Dec 19.
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