View in EDS

A deep multiple instance learning framework improves microsatellite instability detection from tumor next generation sequencing.

Saved in:
Bibliographic Details
Title: A deep multiple instance learning framework improves microsatellite instability detection from tumor next generation sequencing.
Authors: Ziegler J; Department of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA.; MongoDB, New York, NY, USA., Hechtman JF; Department of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA.; Caris Life Sciences, Irving, CA, USA., Rana S; Department of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA., Ptashkin RN; Department of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA.; Natera, San Carlos, CA, USA., Jayakumaran G; Department of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA.; Guardant Health, Palo Alto, CA, USA., Middha S; Department of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA.; Adaptimmune, Philadelphia, PA, USA., Chavan SS; Marie-Josée and Henry R. Kravis Center for Molecular Oncology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.; Repertoire Immune Medicines, Cambridge, MA, USA., Vanderbilt C; Department of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA., DeLair D; Department of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA.; Northwell Health, Greenvale, NY, USA., Casanova J; Department of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA., Shia J; Department of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA., DeGroat N; Department of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA.; Regeneron Pharmaceuticals, Tarrytown, NY, USA., Benayed R; Department of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA.; AstraZeneca, New York, NY, USA., Ladanyi M; Department of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA., Berger MF; Department of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA.; Marie-Josée and Henry R. Kravis Center for Molecular Oncology, Memorial Sloan Kettering Cancer Center, New York, NY, USA., Fuchs TJ; Department of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA.; Weill Cornell Graduate School of Medical Sciences, New York, NY, USA.; Elli Lilly and Company, Indianapolis, IN, USA., Brannon AR; Department of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA. brannona@mskcc.org., Zehir A; Department of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA.; Natera, San Carlos, CA, USA.
Source: Nature communications [Nat Commun] 2025 Jan 02; Vol. 16 (1), pp. 136. Date of Electronic Publication: 2025 Jan 02.
Publication Type: Journal Article; Research Support, N.I.H., Extramural
Journal Info: Publisher: Nature Pub. Group Country of Publication: England NLM ID: 101528555 Publication Model: Electronic Cited Medium: Internet ISSN: 2041-1723 (Electronic) Linking ISSN: 20411723 NLM ISO Abbreviation: Nat Commun Subsets: MEDLINE
Database: MEDLINE Ultimate
FullText Text:
  Availability: 0
Header DbId: mdl
DbLabel: MEDLINE Ultimate
An: 39746944
AccessLevel: 2
PubType: Academic Journal
PubTypeId: academicJournal
PreciseRelevancyScore: 0
IllustrationInfo
Items – Name: Title
  Label: Title
  Group: Ti
  Data: A deep multiple instance learning framework improves microsatellite instability detection from tumor next generation sequencing.
– Name: Author
  Label: Authors
  Group: Au
  Data: <searchLink fieldCode="AU" term="%22Ziegler+J%22">Ziegler J</searchLink>; Department of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA.; MongoDB, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Hechtman+JF%22">Hechtman JF</searchLink>; Department of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA.; Caris Life Sciences, Irving, CA, USA.<br /><searchLink fieldCode="AU" term="%22Rana+S%22">Rana S</searchLink>; Department of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Ptashkin+RN%22">Ptashkin RN</searchLink>; Department of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA.; Natera, San Carlos, CA, USA.<br /><searchLink fieldCode="AU" term="%22Jayakumaran+G%22">Jayakumaran G</searchLink>; Department of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA.; Guardant Health, Palo Alto, CA, USA.<br /><searchLink fieldCode="AU" term="%22Middha+S%22">Middha S</searchLink>; Department of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA.; Adaptimmune, Philadelphia, PA, USA.<br /><searchLink fieldCode="AU" term="%22Chavan+SS%22">Chavan SS</searchLink>; Marie-Josée and Henry R. Kravis Center for Molecular Oncology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.; Repertoire Immune Medicines, Cambridge, MA, USA.<br /><searchLink fieldCode="AU" term="%22Vanderbilt+C%22">Vanderbilt C</searchLink>; Department of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22DeLair+D%22">DeLair D</searchLink>; Department of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA.; Northwell Health, Greenvale, NY, USA.<br /><searchLink fieldCode="AU" term="%22Casanova+J%22">Casanova J</searchLink>; Department of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Shia+J%22">Shia J</searchLink>; Department of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22DeGroat+N%22">DeGroat N</searchLink>; Department of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA.; Regeneron Pharmaceuticals, Tarrytown, NY, USA.<br /><searchLink fieldCode="AU" term="%22Benayed+R%22">Benayed R</searchLink>; Department of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA.; AstraZeneca, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Ladanyi+M%22">Ladanyi M</searchLink>; Department of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Berger+MF%22">Berger MF</searchLink>; Department of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA.; Marie-Josée and Henry R. Kravis Center for Molecular Oncology, Memorial Sloan Kettering Cancer Center, New York, NY, USA.<br /><searchLink fieldCode="AU" term="%22Fuchs+TJ%22">Fuchs TJ</searchLink>; Department of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA.; Weill Cornell Graduate School of Medical Sciences, New York, NY, USA.; Elli Lilly and Company, Indianapolis, IN, USA.<br /><searchLink fieldCode="AU" term="%22Brannon+AR%22">Brannon AR</searchLink>; Department of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA. brannona@mskcc.org.<br /><searchLink fieldCode="AU" term="%22Zehir+A%22">Zehir A</searchLink>; Department of Pathology and Laboratory Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, USA.; Natera, San Carlos, CA, USA.
– Name: TitleSource
  Label: Source
  Group: Src
  Data: <searchLink fieldCode="JN" term="%22101528555%22">Nature communications</searchLink> [Nat Commun] 2025 Jan 02; Vol. 16 (1), pp. 136. <i>Date of Electronic Publication: </i>2025 Jan 02.
– Name: TypePub
  Label: Publication Type
  Group: TypPub
  Data: Journal Article; Research Support, N.I.H., Extramural
– Name: TitleSource
  Label: Journal Info
  Group: Src
  Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22Nature+Pub%2E+Group%22">Nature Pub. Group </searchLink><i>Country of Publication: </i>England <i>NLM ID: </i>101528555 <i>Publication Model: </i>Electronic <i>Cited Medium: </i>Internet <i>ISSN: </i>2041-1723 (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2220411723%22">20411723 </searchLink><i>NLM ISO Abbreviation: </i>Nat Commun <i>Subsets: </i>MEDLINE
PLink https://search.ebscohost.com/login.aspx?direct=true&site=eds-live&db=mdl&AN=39746944
RecordInfo BibRecord:
  BibEntity:
    Identifiers:
      – Type: doi
        Value: 10.1038/s41467-024-54970-z
    Languages:
      – Code: eng
        Text: English
    PhysicalDescription:
      Pagination:
        StartPage: 136
    Titles:
      – TitleFull: A deep multiple instance learning framework improves microsatellite instability detection from tumor next generation sequencing.
        Type: main
  BibRelationships:
    HasContributorRelationships:
      – PersonEntity:
          Name:
            NameFull: Ziegler J
      – PersonEntity:
          Name:
            NameFull: Hechtman JF
      – PersonEntity:
          Name:
            NameFull: Rana S
      – PersonEntity:
          Name:
            NameFull: Ptashkin RN
      – PersonEntity:
          Name:
            NameFull: Jayakumaran G
      – PersonEntity:
          Name:
            NameFull: Middha S
      – PersonEntity:
          Name:
            NameFull: Chavan SS
      – PersonEntity:
          Name:
            NameFull: Vanderbilt C
      – PersonEntity:
          Name:
            NameFull: DeLair D
      – PersonEntity:
          Name:
            NameFull: Casanova J
      – PersonEntity:
          Name:
            NameFull: Shia J
      – PersonEntity:
          Name:
            NameFull: DeGroat N
      – PersonEntity:
          Name:
            NameFull: Benayed R
      – PersonEntity:
          Name:
            NameFull: Ladanyi M
      – PersonEntity:
          Name:
            NameFull: Berger MF
      – PersonEntity:
          Name:
            NameFull: Fuchs TJ
      – PersonEntity:
          Name:
            NameFull: Brannon AR
      – PersonEntity:
          Name:
            NameFull: Zehir A
    IsPartOfRelationships:
      – BibEntity:
          Dates:
            – D: 02
              M: 01
              Text: 2025 Jan 02
              Type: published
              Y: 2025
          Identifiers:
            – Type: issn-electronic
              Value: 2041-1723
          Numbering:
            – Type: volume
              Value: 16
            – Type: issue
              Value: 1
          Titles:
            – TitleFull: Nature communications
              Type: main
ResultId 1