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De-biasing microbiome sequencing data: bacterial morphology-based correction of extraction bias and correlates of chimera formation.

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Title: De-biasing microbiome sequencing data: bacterial morphology-based correction of extraction bias and correlates of chimera formation.
Authors: Rauer L; Institute of Environmental Medicine and Integrative Health, Faculty of Medicine, University of Augsburg, Augsburg, Germany. luise.rauer@tum.de.; Chair of Environmental Medicine, Technical University of Munich, Munich, Germany. luise.rauer@tum.de.; Institute of Environmental Medicine, Helmholtz Munich, Augsburg, Germany. luise.rauer@tum.de., De Tomassi A; Institute of Environmental Medicine and Integrative Health, Faculty of Medicine, University of Augsburg, Augsburg, Germany., Müller CL; Institute of Computational Biology, Helmholtz Munich, Neuherberg, Germany.; Department of Statistics, Ludwig Maximilian University of Munich, Munich, Germany.; Center for Computational Mathematics, Flatiron Institute, New York, USA., Hülpüsch C; Institute of Environmental Medicine and Integrative Health, Faculty of Medicine, University of Augsburg, Augsburg, Germany.; Chair of Environmental Medicine, Technical University of Munich, Munich, Germany.; CK CARE, Christine Kühne Center for Allergy Research and Education, Davos, Switzerland., Traidl-Hoffmann C; Institute of Environmental Medicine and Integrative Health, Faculty of Medicine, University of Augsburg, Augsburg, Germany.; Chair of Environmental Medicine, Technical University of Munich, Munich, Germany.; Institute of Environmental Medicine, Helmholtz Munich, Augsburg, Germany.; CK CARE, Christine Kühne Center for Allergy Research and Education, Davos, Switzerland.; ZIEL - Institute for Food & Health, Technical University of Munich, Freising-Weihenstephan, Germany., Reiger M; Institute of Environmental Medicine and Integrative Health, Faculty of Medicine, University of Augsburg, Augsburg, Germany.; Chair of Environmental Medicine, Technical University of Munich, Munich, Germany.; Institute of Environmental Medicine, Helmholtz Munich, Augsburg, Germany., Neumann AU; Institute of Environmental Medicine and Integrative Health, Faculty of Medicine, University of Augsburg, Augsburg, Germany. avidan.neumann@uni-a.de.; Institute of Environmental Medicine, Helmholtz Munich, Augsburg, Germany. avidan.neumann@uni-a.de.
Source: Microbiome [Microbiome] 2025 Feb 04; Vol. 13 (1), pp. 38. Date of Electronic Publication: 2025 Feb 04.
Publication Type: Journal Article
Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 101615147 Publication Model: Electronic Cited Medium: Internet ISSN: 2049-2618 (Electronic) Linking ISSN: 20492618 NLM ISO Abbreviation: Microbiome Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: De-biasing microbiome sequencing data: bacterial morphology-based correction of extraction bias and correlates of chimera formation.
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  Data: <searchLink fieldCode="AU" term="%22Rauer+L%22">Rauer L</searchLink>; Institute of Environmental Medicine and Integrative Health, Faculty of Medicine, University of Augsburg, Augsburg, Germany. luise.rauer@tum.de.; Chair of Environmental Medicine, Technical University of Munich, Munich, Germany. luise.rauer@tum.de.; Institute of Environmental Medicine, Helmholtz Munich, Augsburg, Germany. luise.rauer@tum.de.<br /><searchLink fieldCode="AU" term="%22De+Tomassi+A%22">De Tomassi A</searchLink>; Institute of Environmental Medicine and Integrative Health, Faculty of Medicine, University of Augsburg, Augsburg, Germany.<br /><searchLink fieldCode="AU" term="%22Müller+CL%22">Müller CL</searchLink>; Institute of Computational Biology, Helmholtz Munich, Neuherberg, Germany.; Department of Statistics, Ludwig Maximilian University of Munich, Munich, Germany.; Center for Computational Mathematics, Flatiron Institute, New York, USA.<br /><searchLink fieldCode="AU" term="%22Hülpüsch+C%22">Hülpüsch C</searchLink>; Institute of Environmental Medicine and Integrative Health, Faculty of Medicine, University of Augsburg, Augsburg, Germany.; Chair of Environmental Medicine, Technical University of Munich, Munich, Germany.; CK CARE, Christine Kühne Center for Allergy Research and Education, Davos, Switzerland.<br /><searchLink fieldCode="AU" term="%22Traidl-Hoffmann+C%22">Traidl-Hoffmann C</searchLink>; Institute of Environmental Medicine and Integrative Health, Faculty of Medicine, University of Augsburg, Augsburg, Germany.; Chair of Environmental Medicine, Technical University of Munich, Munich, Germany.; Institute of Environmental Medicine, Helmholtz Munich, Augsburg, Germany.; CK CARE, Christine Kühne Center for Allergy Research and Education, Davos, Switzerland.; ZIEL - Institute for Food & Health, Technical University of Munich, Freising-Weihenstephan, Germany.<br /><searchLink fieldCode="AU" term="%22Reiger+M%22">Reiger M</searchLink>; Institute of Environmental Medicine and Integrative Health, Faculty of Medicine, University of Augsburg, Augsburg, Germany.; Chair of Environmental Medicine, Technical University of Munich, Munich, Germany.; Institute of Environmental Medicine, Helmholtz Munich, Augsburg, Germany.<br /><searchLink fieldCode="AU" term="%22Neumann+AU%22">Neumann AU</searchLink>; Institute of Environmental Medicine and Integrative Health, Faculty of Medicine, University of Augsburg, Augsburg, Germany. avidan.neumann@uni-a.de.; Institute of Environmental Medicine, Helmholtz Munich, Augsburg, Germany. avidan.neumann@uni-a.de.
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              Text: 2025 Feb 04
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