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Enterococcus and Eggerthella species are enriched in the gut microbiomes of COVID-19 cases in Uganda.

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Title: Enterococcus and Eggerthella species are enriched in the gut microbiomes of COVID-19 cases in Uganda.
Authors: Agudelo C; Division of Infectious Diseases and Vaccinology, School of Public Health, University of California, Berkeley, Berkeley, CA, USA., Kateete DP; Department of Immunology and Molecular Biology, School of Biomedical Sciences, Makerere University College of Health Sciences, Kampala, Uganda.; Integrated Biorepository of H3Africa Uganda (IBRH3AU), Kampala, Uganda., Nasinghe E; Department of Immunology and Molecular Biology, School of Biomedical Sciences, Makerere University College of Health Sciences, Kampala, Uganda.; Integrated Biorepository of H3Africa Uganda (IBRH3AU), Kampala, Uganda., Kamulegeya R; Department of Immunology and Molecular Biology, School of Biomedical Sciences, Makerere University College of Health Sciences, Kampala, Uganda.; Integrated Biorepository of H3Africa Uganda (IBRH3AU), Kampala, Uganda., Lubega C; Department of Immunology and Molecular Biology, School of Biomedical Sciences, Makerere University College of Health Sciences, Kampala, Uganda.; Integrated Biorepository of H3Africa Uganda (IBRH3AU), Kampala, Uganda., Mbabazi M; Department of Immunology and Molecular Biology, School of Biomedical Sciences, Makerere University College of Health Sciences, Kampala, Uganda.; Integrated Biorepository of H3Africa Uganda (IBRH3AU), Kampala, Uganda., Baker N; Division of Infectious Diseases and Vaccinology, School of Public Health, University of California, Berkeley, Berkeley, CA, USA., Lin KY; Division of Infectious Diseases and Vaccinology, School of Public Health, University of California, Berkeley, Berkeley, CA, USA., Liu CC; Division of Infectious Diseases and Vaccinology, School of Public Health, University of California, Berkeley, Berkeley, CA, USA., Kasambula AS; Department of Immunology and Molecular Biology, School of Biomedical Sciences, Makerere University College of Health Sciences, Kampala, Uganda., Kigozi E; Department of Immunology and Molecular Biology, School of Biomedical Sciences, Makerere University College of Health Sciences, Kampala, Uganda., Komakech K; Department of Immunology and Molecular Biology, School of Biomedical Sciences, Makerere University College of Health Sciences, Kampala, Uganda., Mukisa J; Department of Immunology and Molecular Biology, School of Biomedical Sciences, Makerere University College of Health Sciences, Kampala, Uganda., Mulumba K; Department of Immunology and Molecular Biology, School of Biomedical Sciences, Makerere University College of Health Sciences, Kampala, Uganda., Mwachan P; Department of Immunology and Molecular Biology, School of Biomedical Sciences, Makerere University College of Health Sciences, Kampala, Uganda., Nakalanda BS; Department of Immunology and Molecular Biology, School of Biomedical Sciences, Makerere University College of Health Sciences, Kampala, Uganda., Nalubega GP; Department of Immunology and Molecular Biology, School of Biomedical Sciences, Makerere University College of Health Sciences, Kampala, Uganda., Nsubuga J; Department of Immunology and Molecular Biology, School of Biomedical Sciences, Makerere University College of Health Sciences, Kampala, Uganda., Sitenda D; Department of Immunology and Molecular Biology, School of Biomedical Sciences, Makerere University College of Health Sciences, Kampala, Uganda., Ssenfuka H; Department of Immunology and Molecular Biology, School of Biomedical Sciences, Makerere University College of Health Sciences, Kampala, Uganda., Cirolia GT; Division of Infectious Diseases and Vaccinology, School of Public Health, University of California, Berkeley, Berkeley, CA, USA.; Biophysics PhD Program, University of California, Berkeley, Berkeley, CA, USA., Gustafson JT; College of Engineering, University of California, Berkeley, Berkeley, CA, USA., Wang R; College of Engineering, University of California, Berkeley, Berkeley, CA, USA., Nsubuga ML; Department of Immunology and Molecular Biology, School of Biomedical Sciences, Makerere University College of Health Sciences, Kampala, Uganda.; Integrated Biorepository of H3Africa Uganda (IBRH3AU), Kampala, Uganda., Yiga F; Department of Immunology and Molecular Biology, School of Biomedical Sciences, Makerere University College of Health Sciences, Kampala, Uganda.; Integrated Biorepository of H3Africa Uganda (IBRH3AU), Kampala, Uganda., Stanley SA; Division of Infectious Diseases and Vaccinology, School of Public Health, University of California, Berkeley, Berkeley, CA, USA.; Department of Molecular Biology, University of California, Berkeley, Berkeley, CA, USA., Bagaya BS; Department of Immunology and Molecular Biology, School of Biomedical Sciences, Makerere University College of Health Sciences, Kampala, Uganda.; Integrated Biorepository of H3Africa Uganda (IBRH3AU), Kampala, Uganda., Elliott A; MRC/UVRI and LSHTM Uganda Research Unit, Entebbe, Uganda., Joloba M; Department of Immunology and Molecular Biology, School of Biomedical Sciences, Makerere University College of Health Sciences, Kampala, Uganda. mlj10@case.edu.; Integrated Biorepository of H3Africa Uganda (IBRH3AU), Kampala, Uganda. mlj10@case.edu., Wolf AR; Division of Infectious Diseases and Vaccinology, School of Public Health, University of California, Berkeley, Berkeley, CA, USA. awolf@berkeley.edu.; Center for Computational Biology, University of California, Berkeley, Berkeley, CA, USA. awolf@berkeley.edu.
Source: Gut pathogens [Gut Pathog] 2025 Feb 04; Vol. 17 (1), pp. 9. Date of Electronic Publication: 2025 Feb 04.
Publication Type: Journal Article
Journal Info: Publisher: BioMed Central Country of Publication: England NLM ID: 101474263 Publication Model: Electronic Cited Medium: Print ISSN: 1757-4749 (Print) Linking ISSN: 17574749 NLM ISO Abbreviation: Gut Pathog Subsets: PubMed not MEDLINE
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  Data: Enterococcus and Eggerthella species are enriched in the gut microbiomes of COVID-19 cases in Uganda.
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  Data: <searchLink fieldCode="AU" term="%22Agudelo+C%22">Agudelo C</searchLink>; Division of Infectious Diseases and Vaccinology, School of Public Health, University of California, Berkeley, Berkeley, CA, USA.<br /><searchLink fieldCode="AU" term="%22Kateete+DP%22">Kateete DP</searchLink>; Department of Immunology and Molecular Biology, School of Biomedical Sciences, Makerere University College of Health Sciences, Kampala, Uganda.; Integrated Biorepository of H3Africa Uganda (IBRH3AU), Kampala, Uganda.<br /><searchLink fieldCode="AU" term="%22Nasinghe+E%22">Nasinghe E</searchLink>; Department of Immunology and Molecular Biology, School of Biomedical Sciences, Makerere University College of Health Sciences, Kampala, Uganda.; Integrated Biorepository of H3Africa Uganda (IBRH3AU), Kampala, Uganda.<br /><searchLink fieldCode="AU" term="%22Kamulegeya+R%22">Kamulegeya R</searchLink>; Department of Immunology and Molecular Biology, School of Biomedical Sciences, Makerere University College of Health Sciences, Kampala, Uganda.; Integrated Biorepository of H3Africa Uganda (IBRH3AU), Kampala, Uganda.<br /><searchLink fieldCode="AU" term="%22Lubega+C%22">Lubega C</searchLink>; Department of Immunology and Molecular Biology, School of Biomedical Sciences, Makerere University College of Health Sciences, Kampala, Uganda.; Integrated Biorepository of H3Africa Uganda (IBRH3AU), Kampala, Uganda.<br /><searchLink fieldCode="AU" term="%22Mbabazi+M%22">Mbabazi M</searchLink>; Department of Immunology and Molecular Biology, School of Biomedical Sciences, Makerere University College of Health Sciences, Kampala, Uganda.; Integrated Biorepository of H3Africa Uganda (IBRH3AU), Kampala, Uganda.<br /><searchLink fieldCode="AU" term="%22Baker+N%22">Baker N</searchLink>; Division of Infectious Diseases and Vaccinology, School of Public Health, University of California, Berkeley, Berkeley, CA, USA.<br /><searchLink fieldCode="AU" term="%22Lin+KY%22">Lin KY</searchLink>; Division of Infectious Diseases and Vaccinology, School of Public Health, University of California, Berkeley, Berkeley, CA, USA.<br /><searchLink fieldCode="AU" term="%22Liu+CC%22">Liu CC</searchLink>; Division of Infectious Diseases and Vaccinology, School of Public Health, University of California, Berkeley, Berkeley, CA, USA.<br /><searchLink fieldCode="AU" term="%22Kasambula+AS%22">Kasambula AS</searchLink>; Department of Immunology and Molecular Biology, School of Biomedical Sciences, Makerere University College of Health Sciences, Kampala, Uganda.<br /><searchLink fieldCode="AU" term="%22Kigozi+E%22">Kigozi E</searchLink>; Department of Immunology and Molecular Biology, School of Biomedical Sciences, Makerere University College of Health Sciences, Kampala, Uganda.<br /><searchLink fieldCode="AU" term="%22Komakech+K%22">Komakech K</searchLink>; Department of Immunology and Molecular Biology, School of Biomedical Sciences, Makerere University College of Health Sciences, Kampala, Uganda.<br /><searchLink fieldCode="AU" term="%22Mukisa+J%22">Mukisa J</searchLink>; Department of Immunology and Molecular Biology, School of Biomedical Sciences, Makerere University College of Health Sciences, Kampala, Uganda.<br /><searchLink fieldCode="AU" term="%22Mulumba+K%22">Mulumba K</searchLink>; Department of Immunology and Molecular Biology, School of Biomedical Sciences, Makerere University College of Health Sciences, Kampala, Uganda.<br /><searchLink fieldCode="AU" term="%22Mwachan+P%22">Mwachan P</searchLink>; Department of Immunology and Molecular Biology, School of Biomedical Sciences, Makerere University College of Health Sciences, Kampala, Uganda.<br /><searchLink fieldCode="AU" term="%22Nakalanda+BS%22">Nakalanda BS</searchLink>; Department of Immunology and Molecular Biology, School of Biomedical Sciences, Makerere University College of Health Sciences, Kampala, Uganda.<br /><searchLink fieldCode="AU" term="%22Nalubega+GP%22">Nalubega GP</searchLink>; Department of Immunology and Molecular Biology, School of Biomedical Sciences, Makerere University College of Health Sciences, Kampala, Uganda.<br /><searchLink fieldCode="AU" term="%22Nsubuga+J%22">Nsubuga J</searchLink>; Department of Immunology and Molecular Biology, School of Biomedical Sciences, Makerere University College of Health Sciences, Kampala, Uganda.<br /><searchLink fieldCode="AU" term="%22Sitenda+D%22">Sitenda D</searchLink>; Department of Immunology and Molecular Biology, School of Biomedical Sciences, Makerere University College of Health Sciences, Kampala, Uganda.<br /><searchLink fieldCode="AU" term="%22Ssenfuka+H%22">Ssenfuka H</searchLink>; Department of Immunology and Molecular Biology, School of Biomedical Sciences, Makerere University College of Health Sciences, Kampala, Uganda.<br /><searchLink fieldCode="AU" term="%22Cirolia+GT%22">Cirolia GT</searchLink>; Division of Infectious Diseases and Vaccinology, School of Public Health, University of California, Berkeley, Berkeley, CA, USA.; Biophysics PhD Program, University of California, Berkeley, Berkeley, CA, USA.<br /><searchLink fieldCode="AU" term="%22Gustafson+JT%22">Gustafson JT</searchLink>; College of Engineering, University of California, Berkeley, Berkeley, CA, USA.<br /><searchLink fieldCode="AU" term="%22Wang+R%22">Wang R</searchLink>; College of Engineering, University of California, Berkeley, Berkeley, CA, USA.<br /><searchLink fieldCode="AU" term="%22Nsubuga+ML%22">Nsubuga ML</searchLink>; Department of Immunology and Molecular Biology, School of Biomedical Sciences, Makerere University College of Health Sciences, Kampala, Uganda.; Integrated Biorepository of H3Africa Uganda (IBRH3AU), Kampala, Uganda.<br /><searchLink fieldCode="AU" term="%22Yiga+F%22">Yiga F</searchLink>; Department of Immunology and Molecular Biology, School of Biomedical Sciences, Makerere University College of Health Sciences, Kampala, Uganda.; Integrated Biorepository of H3Africa Uganda (IBRH3AU), Kampala, Uganda.<br /><searchLink fieldCode="AU" term="%22Stanley+SA%22">Stanley SA</searchLink>; Division of Infectious Diseases and Vaccinology, School of Public Health, University of California, Berkeley, Berkeley, CA, USA.; Department of Molecular Biology, University of California, Berkeley, Berkeley, CA, USA.<br /><searchLink fieldCode="AU" term="%22Bagaya+BS%22">Bagaya BS</searchLink>; Department of Immunology and Molecular Biology, School of Biomedical Sciences, Makerere University College of Health Sciences, Kampala, Uganda.; Integrated Biorepository of H3Africa Uganda (IBRH3AU), Kampala, Uganda.<br /><searchLink fieldCode="AU" term="%22Elliott+A%22">Elliott A</searchLink>; MRC/UVRI and LSHTM Uganda Research Unit, Entebbe, Uganda.<br /><searchLink fieldCode="AU" term="%22Joloba+M%22">Joloba M</searchLink>; Department of Immunology and Molecular Biology, School of Biomedical Sciences, Makerere University College of Health Sciences, Kampala, Uganda. mlj10@case.edu.; Integrated Biorepository of H3Africa Uganda (IBRH3AU), Kampala, Uganda. mlj10@case.edu.<br /><searchLink fieldCode="AU" term="%22Wolf+AR%22">Wolf AR</searchLink>; Division of Infectious Diseases and Vaccinology, School of Public Health, University of California, Berkeley, Berkeley, CA, USA. awolf@berkeley.edu.; Center for Computational Biology, University of California, Berkeley, Berkeley, CA, USA. awolf@berkeley.edu.
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  Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22BioMed+Central%22">BioMed Central </searchLink><i>Country of Publication: </i>England <i>NLM ID: </i>101474263 <i>Publication Model: </i>Electronic <i>Cited Medium: </i>Print <i>ISSN: </i>1757-4749 (Print) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2217574749%22">17574749 </searchLink><i>NLM ISO Abbreviation: </i>Gut Pathog <i>Subsets: </i>PubMed not MEDLINE
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