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Chromosome-Level Genome Assembly and Annotation of Corallium rubrum: A Mediterranean Coral Threatened by Overharvesting and Climate Change.

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Title: Chromosome-Level Genome Assembly and Annotation of Corallium rubrum: A Mediterranean Coral Threatened by Overharvesting and Climate Change.
Authors: Ledoux JB; CIIMAR/CIMAR, Centro Interdisciplinar de Investigação Marinha e Ambiental, Universidade do Porto, Porto, Portugal., Gomez-Garrido J; Centro Nacional de Análisis Genómico (CNAG), Barcelona 08028, Spain.; Universitat de Barcelona (UB), Barcelona, Spain., Cruz F; Centro Nacional de Análisis Genómico (CNAG), Barcelona 08028, Spain.; Universitat de Barcelona (UB), Barcelona, Spain., Camara Ferreira F; Centro Nacional de Análisis Genómico (CNAG), Barcelona 08028, Spain.; Universitat de Barcelona (UB), Barcelona, Spain., Matos A; CIIMAR/CIMAR, Centro Interdisciplinar de Investigação Marinha e Ambiental, Universidade do Porto, Porto, Portugal., Sarropoulou X; Department of Biology, School of Sciences and Engineering, University of Crete, Heraklion, Crete, Greece.; Institute of Marine Biology, Biotechnology and Aquaculture, Hellenic Centre for Marine Research (HCMR), Heraklion, Crete, Greece., Ramirez-Calero S; Departament de Biologia Marina, Institut de Ciències del Mar (CSIC), Barcelona, Spain.; Departament de Biologia Evolutiva, Ecologia i Ciències Ambientals, Universitat de Barcelona (UB), Barcelona 08028, Spain., Aurelle D; Aix Marseille Université, Université de Toulon, CNRS, IRD, MIO, Marseille, France.; Institut Systématique Evolution Biodiversité (ISYEB), Muséum national d'Histoire naturelle, CNRS, Sorbonne Université, EPHE, Université des Antilles, CP 26, 75005 Paris, France., Lopez-Sendino P; Departament de Biologia Marina, Institut de Ciències del Mar (CSIC), Barcelona, Spain., Grayson NE; Center for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California San Diego, La Jolla, CA, USA., Moore BS; Center for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California San Diego, La Jolla, CA, USA.; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, CA, USA., Antunes A; CIIMAR/CIMAR, Centro Interdisciplinar de Investigação Marinha e Ambiental, Universidade do Porto, Porto, Portugal.; Department of Biology, Faculty of Sciences, University of Porto, Porto 4169-007, Portugal., Aguilera L; Centro Nacional de Análisis Genómico (CNAG), Barcelona 08028, Spain.; Universitat de Barcelona (UB), Barcelona, Spain., Gut M; Centro Nacional de Análisis Genómico (CNAG), Barcelona 08028, Spain.; Universitat de Barcelona (UB), Barcelona, Spain., Salces-Ortiz J; Metazoa Phylogenomics Lab, Institute of Evolutionary Biology (CSIC-University Pompeu Fabra), Barcelona, Spain., Fernández R; Metazoa Phylogenomics Lab, Institute of Evolutionary Biology (CSIC-University Pompeu Fabra), Barcelona, Spain., Linares C; Departament de Biologia Evolutiva, Ecologia i Ciències Ambientals, Universitat de Barcelona (UB), Barcelona 08028, Spain.; Institut de Recerca de la Biodiversitat (IRBio), Universitat de Barcelona, Barcelona, Spain., Garrabou J; Departament de Biologia Marina, Institut de Ciències del Mar (CSIC), Barcelona, Spain., Alioto T; Centro Nacional de Análisis Genómico (CNAG), Barcelona 08028, Spain.; Universitat de Barcelona (UB), Barcelona, Spain.
Source: Genome biology and evolution [Genome Biol Evol] 2025 Feb 03; Vol. 17 (2).
Publication Type: Journal Article; Research Support, Non-U.S. Gov't
Journal Info: Publisher: Oxford University Press Country of Publication: England NLM ID: 101509707 Publication Model: Print Cited Medium: Internet ISSN: 1759-6653 (Electronic) Linking ISSN: 17596653 NLM ISO Abbreviation: Genome Biol Evol Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: Chromosome-Level Genome Assembly and Annotation of Corallium rubrum: A Mediterranean Coral Threatened by Overharvesting and Climate Change.
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  Data: <searchLink fieldCode="AU" term="%22Ledoux+JB%22">Ledoux JB</searchLink>; CIIMAR/CIMAR, Centro Interdisciplinar de Investigação Marinha e Ambiental, Universidade do Porto, Porto, Portugal.<br /><searchLink fieldCode="AU" term="%22Gomez-Garrido+J%22">Gomez-Garrido J</searchLink>; Centro Nacional de Análisis Genómico (CNAG), Barcelona 08028, Spain.; Universitat de Barcelona (UB), Barcelona, Spain.<br /><searchLink fieldCode="AU" term="%22Cruz+F%22">Cruz F</searchLink>; Centro Nacional de Análisis Genómico (CNAG), Barcelona 08028, Spain.; Universitat de Barcelona (UB), Barcelona, Spain.<br /><searchLink fieldCode="AU" term="%22Camara+Ferreira+F%22">Camara Ferreira F</searchLink>; Centro Nacional de Análisis Genómico (CNAG), Barcelona 08028, Spain.; Universitat de Barcelona (UB), Barcelona, Spain.<br /><searchLink fieldCode="AU" term="%22Matos+A%22">Matos A</searchLink>; CIIMAR/CIMAR, Centro Interdisciplinar de Investigação Marinha e Ambiental, Universidade do Porto, Porto, Portugal.<br /><searchLink fieldCode="AU" term="%22Sarropoulou+X%22">Sarropoulou X</searchLink>; Department of Biology, School of Sciences and Engineering, University of Crete, Heraklion, Crete, Greece.; Institute of Marine Biology, Biotechnology and Aquaculture, Hellenic Centre for Marine Research (HCMR), Heraklion, Crete, Greece.<br /><searchLink fieldCode="AU" term="%22Ramirez-Calero+S%22">Ramirez-Calero S</searchLink>; Departament de Biologia Marina, Institut de Ciències del Mar (CSIC), Barcelona, Spain.; Departament de Biologia Evolutiva, Ecologia i Ciències Ambientals, Universitat de Barcelona (UB), Barcelona 08028, Spain.<br /><searchLink fieldCode="AU" term="%22Aurelle+D%22">Aurelle D</searchLink>; Aix Marseille Université, Université de Toulon, CNRS, IRD, MIO, Marseille, France.; Institut Systématique Evolution Biodiversité (ISYEB), Muséum national d'Histoire naturelle, CNRS, Sorbonne Université, EPHE, Université des Antilles, CP 26, 75005 Paris, France.<br /><searchLink fieldCode="AU" term="%22Lopez-Sendino+P%22">Lopez-Sendino P</searchLink>; Departament de Biologia Marina, Institut de Ciències del Mar (CSIC), Barcelona, Spain.<br /><searchLink fieldCode="AU" term="%22Grayson+NE%22">Grayson NE</searchLink>; Center for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California San Diego, La Jolla, CA, USA.<br /><searchLink fieldCode="AU" term="%22Moore+BS%22">Moore BS</searchLink>; Center for Marine Biotechnology and Biomedicine, Scripps Institution of Oceanography, University of California San Diego, La Jolla, CA, USA.; Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, CA, USA.<br /><searchLink fieldCode="AU" term="%22Antunes+A%22">Antunes A</searchLink>; CIIMAR/CIMAR, Centro Interdisciplinar de Investigação Marinha e Ambiental, Universidade do Porto, Porto, Portugal.; Department of Biology, Faculty of Sciences, University of Porto, Porto 4169-007, Portugal.<br /><searchLink fieldCode="AU" term="%22Aguilera+L%22">Aguilera L</searchLink>; Centro Nacional de Análisis Genómico (CNAG), Barcelona 08028, Spain.; Universitat de Barcelona (UB), Barcelona, Spain.<br /><searchLink fieldCode="AU" term="%22Gut+M%22">Gut M</searchLink>; Centro Nacional de Análisis Genómico (CNAG), Barcelona 08028, Spain.; Universitat de Barcelona (UB), Barcelona, Spain.<br /><searchLink fieldCode="AU" term="%22Salces-Ortiz+J%22">Salces-Ortiz J</searchLink>; Metazoa Phylogenomics Lab, Institute of Evolutionary Biology (CSIC-University Pompeu Fabra), Barcelona, Spain.<br /><searchLink fieldCode="AU" term="%22Fernández+R%22">Fernández R</searchLink>; Metazoa Phylogenomics Lab, Institute of Evolutionary Biology (CSIC-University Pompeu Fabra), Barcelona, Spain.<br /><searchLink fieldCode="AU" term="%22Linares+C%22">Linares C</searchLink>; Departament de Biologia Evolutiva, Ecologia i Ciències Ambientals, Universitat de Barcelona (UB), Barcelona 08028, Spain.; Institut de Recerca de la Biodiversitat (IRBio), Universitat de Barcelona, Barcelona, Spain.<br /><searchLink fieldCode="AU" term="%22Garrabou+J%22">Garrabou J</searchLink>; Departament de Biologia Marina, Institut de Ciències del Mar (CSIC), Barcelona, Spain.<br /><searchLink fieldCode="AU" term="%22Alioto+T%22">Alioto T</searchLink>; Centro Nacional de Análisis Genómico (CNAG), Barcelona 08028, Spain.; Universitat de Barcelona (UB), Barcelona, Spain.
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              Text: 2025 Feb 03
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