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Visualizing and analyzing 3D biomolecular structures using Mol* at RCSB.org: Influenza A H5N1 virus proteome case study.

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Title: Visualizing and analyzing 3D biomolecular structures using Mol* at RCSB.org: Influenza A H5N1 virus proteome case study.
Authors: Bittrich S; Research Collaboratory for Structural Bioinformatics Protein Data Bank, San Diego Supercomputer Center, University of California San Diego, La Jolla, California, USA., Rose AS; Mol* Consortium, San Diego, California, USA., Sehnal D; National Centre for Biomolecular Research, Faculty of Science, Masaryk University, Brno, Czech Republic., Duarte JM; Research Collaboratory for Structural Bioinformatics Protein Data Bank, San Diego Supercomputer Center, University of California San Diego, La Jolla, California, USA., Rose Y; Research Collaboratory for Structural Bioinformatics Protein Data Bank, San Diego Supercomputer Center, University of California San Diego, La Jolla, California, USA., Segura J; Research Collaboratory for Structural Bioinformatics Protein Data Bank, San Diego Supercomputer Center, University of California San Diego, La Jolla, California, USA., Piehl DW; Research Collaboratory for Structural Bioinformatics Protein Data Bank, Institute for Quantitative Biomedicine, Rutgers, The State University of New Jersey, Piscataway, New Jersey, USA., Vallat B; Research Collaboratory for Structural Bioinformatics Protein Data Bank, Institute for Quantitative Biomedicine, Rutgers, The State University of New Jersey, Piscataway, New Jersey, USA.; Rutgers Cancer Institute, Rutgers, The State University of New Jersey, New Brunswick, New Jersey, USA., Shao C; Research Collaboratory for Structural Bioinformatics Protein Data Bank, Institute for Quantitative Biomedicine, Rutgers, The State University of New Jersey, Piscataway, New Jersey, USA., Bhikadiya C; Research Collaboratory for Structural Bioinformatics Protein Data Bank, San Diego Supercomputer Center, University of California San Diego, La Jolla, California, USA., Liang J; Research Collaboratory for Structural Bioinformatics Protein Data Bank, San Diego Supercomputer Center, University of California San Diego, La Jolla, California, USA., Ma M; Research Collaboratory for Structural Bioinformatics Protein Data Bank, San Diego Supercomputer Center, University of California San Diego, La Jolla, California, USA., Goodsell DS; Research Collaboratory for Structural Bioinformatics Protein Data Bank, Institute for Quantitative Biomedicine, Rutgers, The State University of New Jersey, Piscataway, New Jersey, USA.; Rutgers Cancer Institute, Rutgers, The State University of New Jersey, New Brunswick, New Jersey, USA.; Department of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, California, USA., Burley SK; Research Collaboratory for Structural Bioinformatics Protein Data Bank, San Diego Supercomputer Center, University of California San Diego, La Jolla, California, USA.; Research Collaboratory for Structural Bioinformatics Protein Data Bank, Institute for Quantitative Biomedicine, Rutgers, The State University of New Jersey, Piscataway, New Jersey, USA.; Rutgers Cancer Institute, Rutgers, The State University of New Jersey, New Brunswick, New Jersey, USA.; Rutgers Artificial Intelligence and Data Science (RAD) Collaboratory, Rutgers, The State University of New Jersey, Piscataway, New Jersey, USA.; Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, Piscataway, New Jersey, USA., Dutta S; Research Collaboratory for Structural Bioinformatics Protein Data Bank, Institute for Quantitative Biomedicine, Rutgers, The State University of New Jersey, Piscataway, New Jersey, USA.; Rutgers Cancer Institute, Rutgers, The State University of New Jersey, New Brunswick, New Jersey, USA.
Source: Protein science : a publication of the Protein Society [Protein Sci] 2025 Apr; Vol. 34 (4), pp. e70093.
Publication Type: Journal Article
Journal Info: Publisher: Cold Spring Harbor Laboratory Press Country of Publication: United States NLM ID: 9211750 Publication Model: Print Cited Medium: Internet ISSN: 1469-896X (Electronic) Linking ISSN: 09618368 NLM ISO Abbreviation: Protein Sci Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: Visualizing and analyzing 3D biomolecular structures using Mol* at RCSB.org: Influenza A H5N1 virus proteome case study.
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  Data: <searchLink fieldCode="AU" term="%22Bittrich+S%22">Bittrich S</searchLink>; Research Collaboratory for Structural Bioinformatics Protein Data Bank, San Diego Supercomputer Center, University of California San Diego, La Jolla, California, USA.<br /><searchLink fieldCode="AU" term="%22Rose+AS%22">Rose AS</searchLink>; Mol* Consortium, San Diego, California, USA.<br /><searchLink fieldCode="AU" term="%22Sehnal+D%22">Sehnal D</searchLink>; National Centre for Biomolecular Research, Faculty of Science, Masaryk University, Brno, Czech Republic.<br /><searchLink fieldCode="AU" term="%22Duarte+JM%22">Duarte JM</searchLink>; Research Collaboratory for Structural Bioinformatics Protein Data Bank, San Diego Supercomputer Center, University of California San Diego, La Jolla, California, USA.<br /><searchLink fieldCode="AU" term="%22Rose+Y%22">Rose Y</searchLink>; Research Collaboratory for Structural Bioinformatics Protein Data Bank, San Diego Supercomputer Center, University of California San Diego, La Jolla, California, USA.<br /><searchLink fieldCode="AU" term="%22Segura+J%22">Segura J</searchLink>; Research Collaboratory for Structural Bioinformatics Protein Data Bank, San Diego Supercomputer Center, University of California San Diego, La Jolla, California, USA.<br /><searchLink fieldCode="AU" term="%22Piehl+DW%22">Piehl DW</searchLink>; Research Collaboratory for Structural Bioinformatics Protein Data Bank, Institute for Quantitative Biomedicine, Rutgers, The State University of New Jersey, Piscataway, New Jersey, USA.<br /><searchLink fieldCode="AU" term="%22Vallat+B%22">Vallat B</searchLink>; Research Collaboratory for Structural Bioinformatics Protein Data Bank, Institute for Quantitative Biomedicine, Rutgers, The State University of New Jersey, Piscataway, New Jersey, USA.; Rutgers Cancer Institute, Rutgers, The State University of New Jersey, New Brunswick, New Jersey, USA.<br /><searchLink fieldCode="AU" term="%22Shao+C%22">Shao C</searchLink>; Research Collaboratory for Structural Bioinformatics Protein Data Bank, Institute for Quantitative Biomedicine, Rutgers, The State University of New Jersey, Piscataway, New Jersey, USA.<br /><searchLink fieldCode="AU" term="%22Bhikadiya+C%22">Bhikadiya C</searchLink>; Research Collaboratory for Structural Bioinformatics Protein Data Bank, San Diego Supercomputer Center, University of California San Diego, La Jolla, California, USA.<br /><searchLink fieldCode="AU" term="%22Liang+J%22">Liang J</searchLink>; Research Collaboratory for Structural Bioinformatics Protein Data Bank, San Diego Supercomputer Center, University of California San Diego, La Jolla, California, USA.<br /><searchLink fieldCode="AU" term="%22Ma+M%22">Ma M</searchLink>; Research Collaboratory for Structural Bioinformatics Protein Data Bank, San Diego Supercomputer Center, University of California San Diego, La Jolla, California, USA.<br /><searchLink fieldCode="AU" term="%22Goodsell+DS%22">Goodsell DS</searchLink>; Research Collaboratory for Structural Bioinformatics Protein Data Bank, Institute for Quantitative Biomedicine, Rutgers, The State University of New Jersey, Piscataway, New Jersey, USA.; Rutgers Cancer Institute, Rutgers, The State University of New Jersey, New Brunswick, New Jersey, USA.; Department of Integrative Structural and Computational Biology, The Scripps Research Institute, La Jolla, California, USA.<br /><searchLink fieldCode="AU" term="%22Burley+SK%22">Burley SK</searchLink>; Research Collaboratory for Structural Bioinformatics Protein Data Bank, San Diego Supercomputer Center, University of California San Diego, La Jolla, California, USA.; Research Collaboratory for Structural Bioinformatics Protein Data Bank, Institute for Quantitative Biomedicine, Rutgers, The State University of New Jersey, Piscataway, New Jersey, USA.; Rutgers Cancer Institute, Rutgers, The State University of New Jersey, New Brunswick, New Jersey, USA.; Rutgers Artificial Intelligence and Data Science (RAD) Collaboratory, Rutgers, The State University of New Jersey, Piscataway, New Jersey, USA.; Department of Chemistry and Chemical Biology, Rutgers, The State University of New Jersey, Piscataway, New Jersey, USA.<br /><searchLink fieldCode="AU" term="%22Dutta+S%22">Dutta S</searchLink>; Research Collaboratory for Structural Bioinformatics Protein Data Bank, Institute for Quantitative Biomedicine, Rutgers, The State University of New Jersey, Piscataway, New Jersey, USA.; Rutgers Cancer Institute, Rutgers, The State University of New Jersey, New Brunswick, New Jersey, USA.
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