Severus detects somatic structural variation and complex rearrangements in cancer genomes using long-read sequencing.
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| Title: | Severus detects somatic structural variation and complex rearrangements in cancer genomes using long-read sequencing. |
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| Authors: | Keskus AG; Cancer Data Science Laboratory, Center for Cancer Research, National Cancer Institute, NIH, Bethesda, MD, USA., Bryant A; Cancer Data Science Laboratory, Center for Cancer Research, National Cancer Institute, NIH, Bethesda, MD, USA., Ahmad T; Cancer Data Science Laboratory, Center for Cancer Research, National Cancer Institute, NIH, Bethesda, MD, USA., Yoo B; Children's Mercy Hospital, University of Missouri-Kansas City School of Medicine, Kansas City, MO, USA., Aganezov S; Oxford Nanopore Technologies, New York, NY, USA., Goretsky A; Cancer Data Science Laboratory, Center for Cancer Research, National Cancer Institute, NIH, Bethesda, MD, USA.; Department of Computer Science, University of Maryland, College Park, MD, USA., Donmez A; Cancer Data Science Laboratory, Center for Cancer Research, National Cancer Institute, NIH, Bethesda, MD, USA.; Department of Computer Science, University of Maryland, College Park, MD, USA., Lansdon LA; Children's Mercy Hospital, University of Missouri-Kansas City School of Medicine, Kansas City, MO, USA., Rodriguez I; Division of Cancer Epidemiology and Genetics, National Cancer Institute, NIH, Rockville, MD, USA., Park J; University of California, Santa Cruz, Genomics Institute, Santa Cruz, CA, USA., Liu Y; Cancer Data Science Laboratory, Center for Cancer Research, National Cancer Institute, NIH, Bethesda, MD, USA.; Department of Computer Science, University of Maryland, College Park, MD, USA., Cui X; Cancer Data Science Laboratory, Center for Cancer Research, National Cancer Institute, NIH, Bethesda, MD, USA., Gardner J; University of California, Santa Cruz, Genomics Institute, Santa Cruz, CA, USA., McNulty B; University of California, Santa Cruz, Genomics Institute, Santa Cruz, CA, USA., Sacco S; University of California, Santa Cruz, Genomics Institute, Santa Cruz, CA, USA., Shetty J; Sequencing Facility, Cancer Research Technology Program, Frederick National Laboratory for Cancer Research, Frederick, MD, USA., Zhao Y; Sequencing Facility Bioinformatics Group, Biomedical Informatics and Data Science Directorate, Frederick National Laboratory for Cancer Research, Frederick, MD, USA., Tran B; Sequencing Facility, Cancer Research Technology Program, Frederick National Laboratory for Cancer Research, Frederick, MD, USA., Narzisi G; New York Genome Center, New York, NY, USA., Helland A; New York Genome Center, New York, NY, USA., Cook DE; Google, Inc., Mountain View, CA, USA., Chang PC; Google, Inc., Mountain View, CA, USA., Kolesnikov A; Google, Inc., Mountain View, CA, USA., Carroll A; Google, Inc., Mountain View, CA, USA., Molloy EK; Department of Computer Science, University of Maryland, College Park, MD, USA., Bi C; Children's Mercy Hospital, University of Missouri-Kansas City School of Medicine, Kansas City, MO, USA., Walter A; Children's Mercy Hospital, University of Missouri-Kansas City School of Medicine, Kansas City, MO, USA., Gibson M; Children's Mercy Hospital, University of Missouri-Kansas City School of Medicine, Kansas City, MO, USA., Pushel I; Children's Mercy Hospital, University of Missouri-Kansas City School of Medicine, Kansas City, MO, USA., Guest E; Children's Mercy Hospital, University of Missouri-Kansas City School of Medicine, Kansas City, MO, USA., Pastinen T; Children's Mercy Hospital, University of Missouri-Kansas City School of Medicine, Kansas City, MO, USA., Shafin K; Division of Cancer Epidemiology and Genetics, National Cancer Institute, NIH, Rockville, MD, USA., Miga KH; University of California, Santa Cruz, Genomics Institute, Santa Cruz, CA, USA., Malikic S; Cancer Data Science Laboratory, Center for Cancer Research, National Cancer Institute, NIH, Bethesda, MD, USA., Day CP; Cancer Data Science Laboratory, Center for Cancer Research, National Cancer Institute, NIH, Bethesda, MD, USA., Robine N; New York Genome Center, New York, NY, USA., Sahinalp C; Cancer Data Science Laboratory, Center for Cancer Research, National Cancer Institute, NIH, Bethesda, MD, USA., Dean M; Division of Cancer Epidemiology and Genetics, National Cancer Institute, NIH, Rockville, MD, USA., Farooqi MS; Children's Mercy Hospital, University of Missouri-Kansas City School of Medicine, Kansas City, MO, USA., Paten B; University of California, Santa Cruz, Genomics Institute, Santa Cruz, CA, USA., Kolmogorov M; Cancer Data Science Laboratory, Center for Cancer Research, National Cancer Institute, NIH, Bethesda, MD, USA. mikhail.kolmogorov@nih.gov. |
| Source: | Nature biotechnology [Nat Biotechnol] 2026 Feb; Vol. 44 (2), pp. 247-257. Date of Electronic Publication: 2025 Apr 04. |
| Publication Type: | Journal Article |
| Journal Info: | Publisher: Nature America Publishing Country of Publication: United States NLM ID: 9604648 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1546-1696 (Electronic) Linking ISSN: 10870156 NLM ISO Abbreviation: Nat Biotechnol Subsets: MEDLINE |
| Database: | MEDLINE Ultimate |
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