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Error-corrected flow-based sequencing at whole-genome scale and its application to circulating cell-free DNA profiling.

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Title: Error-corrected flow-based sequencing at whole-genome scale and its application to circulating cell-free DNA profiling.
Authors: Cheng AP; New York Genome Center, New York, NY, USA. alexandre.cheng@etsmtl.ca.; Sandra and Edward Meyer Cancer Center, Weill Cornell Medicine, Weill Cornell Medical College, New York, NY, USA. alexandre.cheng@etsmtl.ca.; Département de Génie des Systèmes, École de Technologie Supérieure, Montréal, Québec, Canada. alexandre.cheng@etsmtl.ca.; Axe Cancer, Centre de Recherche du Centre Hospitalier de l'Université de Montréal (CRCHUM), Montréal, Québec, Canada. alexandre.cheng@etsmtl.ca., Widman AJ; New York Genome Center, New York, NY, USA.; Memorial Sloan Kettering Cancer Center, New York, NY, USA., Arora A; New York Genome Center, New York, NY, USA.; Sandra and Edward Meyer Cancer Center, Weill Cornell Medicine, Weill Cornell Medical College, New York, NY, USA., Rusinek I; Ultima Genomics, Fremont, CA, USA., Sossin A; New York Genome Center, New York, NY, USA.; Sandra and Edward Meyer Cancer Center, Weill Cornell Medicine, Weill Cornell Medical College, New York, NY, USA., Rajagopalan S; New York Genome Center, New York, NY, USA.; Sandra and Edward Meyer Cancer Center, Weill Cornell Medicine, Weill Cornell Medical College, New York, NY, USA., Midler N; New York Genome Center, New York, NY, USA.; Sandra and Edward Meyer Cancer Center, Weill Cornell Medicine, Weill Cornell Medical College, New York, NY, USA., Hooper WF; New York Genome Center, New York, NY, USA., Murray RM; New York Genome Center, New York, NY, USA.; Sandra and Edward Meyer Cancer Center, Weill Cornell Medicine, Weill Cornell Medical College, New York, NY, USA., Halmos D; New York Genome Center, New York, NY, USA.; Sandra and Edward Meyer Cancer Center, Weill Cornell Medicine, Weill Cornell Medical College, New York, NY, USA., Langanay T; New York Genome Center, New York, NY, USA.; Sandra and Edward Meyer Cancer Center, Weill Cornell Medicine, Weill Cornell Medical College, New York, NY, USA., Chu H; Sandra and Edward Meyer Cancer Center, Weill Cornell Medicine, Weill Cornell Medical College, New York, NY, USA., Inghirami G; Sandra and Edward Meyer Cancer Center, Weill Cornell Medicine, Weill Cornell Medical College, New York, NY, USA., Potenski C; New York Genome Center, New York, NY, USA.; Sandra and Edward Meyer Cancer Center, Weill Cornell Medicine, Weill Cornell Medical College, New York, NY, USA., Germer S; New York Genome Center, New York, NY, USA., Marton M; New York Genome Center, New York, NY, USA., Manaa D; New York Genome Center, New York, NY, USA., Helland A; New York Genome Center, New York, NY, USA., Furatero R; New York Genome Center, New York, NY, USA., McClintock J; New York Genome Center, New York, NY, USA., Winterkorn L; New York Genome Center, New York, NY, USA., Steinsnyder Z; New York Genome Center, New York, NY, USA., Wang Y; New York Genome Center, New York, NY, USA.; Sandra and Edward Meyer Cancer Center, Weill Cornell Medicine, Weill Cornell Medical College, New York, NY, USA., Alimohamed AI; Mass General Cancer Center, Massachusetts General Hospital, Boston, MA, USA., Malbari MS; Sandra and Edward Meyer Cancer Center, Weill Cornell Medicine, Weill Cornell Medical College, New York, NY, USA., Saxena A; Sandra and Edward Meyer Cancer Center, Weill Cornell Medicine, Weill Cornell Medical College, New York, NY, USA., Callahan MK; Memorial Sloan Kettering Cancer Center, New York, NY, USA., Frederick DT; Mass General Cancer Center, Massachusetts General Hospital, Boston, MA, USA., Spain L; Cancer Dynamics Laboratory, The Francis Crick Institute, London, UK.; Renal and Skin Unit, The Royal Marsden NHS Foundation Trust, London, UK., Sigouros M; Caryl and Israel Englander Institute for Precision Medicine, Weill Cornell Medicine, New York, NY, USA., Manohar J; Caryl and Israel Englander Institute for Precision Medicine, Weill Cornell Medicine, New York, NY, USA., King A; Caryl and Israel Englander Institute for Precision Medicine, Weill Cornell Medicine, New York, NY, USA., Wilkes D; Caryl and Israel Englander Institute for Precision Medicine, Weill Cornell Medicine, New York, NY, USA., Otilano J; Caryl and Israel Englander Institute for Precision Medicine, Weill Cornell Medicine, New York, NY, USA., Elemento O; Caryl and Israel Englander Institute for Precision Medicine, Weill Cornell Medicine, New York, NY, USA.; Department of Physiology and Biophysics, Weill Cornell Medicine, New York, NY, USA., Mosquera JM; Caryl and Israel Englander Institute for Precision Medicine, Weill Cornell Medicine, New York, NY, USA.; Department of Physiology and Biophysics, Weill Cornell Medicine, New York, NY, USA.; Department of Pathology and Laboratory Medicine, Weill Cornell Medicine, New York, NY, USA., Jaimovich A; Ultima Genomics, Fremont, CA, USA., Lipson D; Ultima Genomics, Fremont, CA, USA., Turajlic S; Cancer Dynamics Laboratory, The Francis Crick Institute, London, UK.; Renal and Skin Unit, The Royal Marsden NHS Foundation Trust, London, UK., Zody MC; New York Genome Center, New York, NY, USA., Altorki NK; Sandra and Edward Meyer Cancer Center, Weill Cornell Medicine, Weill Cornell Medical College, New York, NY, USA., Wolchok JD; Sandra and Edward Meyer Cancer Center, Weill Cornell Medicine, Weill Cornell Medical College, New York, NY, USA.; Parker Institute for Cancer Immunotherapy, San Francisco, CA, USA.; Ludwig Institute for Cancer Research, New York, NY, USA., Postow MA; Sandra and Edward Meyer Cancer Center, Weill Cornell Medicine, Weill Cornell Medical College, New York, NY, USA.; Memorial Sloan Kettering Cancer Center, New York, NY, USA., Robine N; New York Genome Center, New York, NY, USA., Faltas BM; Sandra and Edward Meyer Cancer Center, Weill Cornell Medicine, Weill Cornell Medical College, New York, NY, USA.; Caryl and Israel Englander Institute for Precision Medicine, Weill Cornell Medicine, New York, NY, USA.; Department of Cell and Developmental Biology, Weill Cornell Medicine, New York, NY, USA., Boland G; Mass General Cancer Center, Massachusetts General Hospital, Boston, MA, USA., Landau DA; New York Genome Center, New York, NY, USA. dlandau@nygenome.org.; Sandra and Edward Meyer Cancer Center, Weill Cornell Medicine, Weill Cornell Medical College, New York, NY, USA. dlandau@nygenome.org.
Source: Nature methods [Nat Methods] 2025 May; Vol. 22 (5), pp. 973-981. Date of Electronic Publication: 2025 Apr 11.
Publication Type: Journal Article
Journal Info: Publisher: Nature Pub. Group Country of Publication: United States NLM ID: 101215604 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1548-7105 (Electronic) Linking ISSN: 15487091 NLM ISO Abbreviation: Nat Methods Subsets: MEDLINE
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