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Development and validation of a new mpox virus sequencing and bioinformatic analysis pipeline.

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Title: Development and validation of a new mpox virus sequencing and bioinformatic analysis pipeline.
Authors: Ochwoto M; Division of Intramural Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT, USA., Kuhn S; Research Technologies Branch, Division of Intramural Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT, USA.; Integrated Data Sciences Section, Research Technologies Branch, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD, USA., Schaughency P; Research Technologies Branch, Division of Intramural Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT, USA.; Integrated Data Sciences Section, Research Technologies Branch, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD, USA., Greene B; Division of Intramural Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT, USA., Hawes K; Division of Intramural Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT, USA., Koukouikila-Koussounda F; Laboratoire National de Santé Publique, Brazzaville, Republic of the Congo.; Faculté des Sciences et Techniques, Marien Ngouabi University, Brazzaville, Republic of the Congo., Elenga RG; Laboratoire National de Santé Publique, Brazzaville, Republic of the Congo.; Faculté des Sciences et Techniques, Marien Ngouabi University, Brazzaville, Republic of the Congo., Boussam DAE; Laboratoire National de Santé Publique, Brazzaville, Republic of the Congo., Mayangue PI; Laboratoire National de Santé Publique, Brazzaville, Republic of the Congo.; Faculté des Sciences et Techniques, Marien Ngouabi University, Brazzaville, Republic of the Congo., Schulz J; Division of Intramural Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT, USA., Martens C; Research Technologies Branch, Division of Intramural Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT, USA., Niama FR; Laboratoire National de Santé Publique, Brazzaville, Republic of the Congo.; Faculté des Sciences et Techniques, Marien Ngouabi University, Brazzaville, Republic of the Congo., Lack J; Research Technologies Branch, Division of Intramural Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT, USA.; Integrated Data Sciences Section, Research Technologies Branch, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD, USA., Relich RF; Department of Pathology and Laboratory Medicine, Indiana University School of Medicine, Indianapolis, IN, USA., Munster VJ; Division of Intramural Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT, USA., Yinda CK; Division of Intramural Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT, USA.
Source: Emerging microbes & infections [Emerg Microbes Infect] 2025 Dec; Vol. 14 (1), pp. 2494733. Date of Electronic Publication: 2025 May 02.
Publication Type: Journal Article; Validation Study
Journal Info: Publisher: Taylor & Francis Country of Publication: United States NLM ID: 101594885 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2222-1751 (Electronic) Linking ISSN: 22221751 NLM ISO Abbreviation: Emerg Microbes Infect Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: Development and validation of a new mpox virus sequencing and bioinformatic analysis pipeline.
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  Data: <searchLink fieldCode="AU" term="%22Ochwoto+M%22">Ochwoto M</searchLink>; Division of Intramural Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT, USA.<br /><searchLink fieldCode="AU" term="%22Kuhn+S%22">Kuhn S</searchLink>; Research Technologies Branch, Division of Intramural Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT, USA.; Integrated Data Sciences Section, Research Technologies Branch, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD, USA.<br /><searchLink fieldCode="AU" term="%22Schaughency+P%22">Schaughency P</searchLink>; Research Technologies Branch, Division of Intramural Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT, USA.; Integrated Data Sciences Section, Research Technologies Branch, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD, USA.<br /><searchLink fieldCode="AU" term="%22Greene+B%22">Greene B</searchLink>; Division of Intramural Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT, USA.<br /><searchLink fieldCode="AU" term="%22Hawes+K%22">Hawes K</searchLink>; Division of Intramural Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT, USA.<br /><searchLink fieldCode="AU" term="%22Koukouikila-Koussounda+F%22">Koukouikila-Koussounda F</searchLink>; Laboratoire National de Santé Publique, Brazzaville, Republic of the Congo.; Faculté des Sciences et Techniques, Marien Ngouabi University, Brazzaville, Republic of the Congo.<br /><searchLink fieldCode="AU" term="%22Elenga+RG%22">Elenga RG</searchLink>; Laboratoire National de Santé Publique, Brazzaville, Republic of the Congo.; Faculté des Sciences et Techniques, Marien Ngouabi University, Brazzaville, Republic of the Congo.<br /><searchLink fieldCode="AU" term="%22Boussam+DAE%22">Boussam DAE</searchLink>; Laboratoire National de Santé Publique, Brazzaville, Republic of the Congo.<br /><searchLink fieldCode="AU" term="%22Mayangue+PI%22">Mayangue PI</searchLink>; Laboratoire National de Santé Publique, Brazzaville, Republic of the Congo.; Faculté des Sciences et Techniques, Marien Ngouabi University, Brazzaville, Republic of the Congo.<br /><searchLink fieldCode="AU" term="%22Schulz+J%22">Schulz J</searchLink>; Division of Intramural Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT, USA.<br /><searchLink fieldCode="AU" term="%22Martens+C%22">Martens C</searchLink>; Research Technologies Branch, Division of Intramural Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT, USA.<br /><searchLink fieldCode="AU" term="%22Niama+FR%22">Niama FR</searchLink>; Laboratoire National de Santé Publique, Brazzaville, Republic of the Congo.; Faculté des Sciences et Techniques, Marien Ngouabi University, Brazzaville, Republic of the Congo.<br /><searchLink fieldCode="AU" term="%22Lack+J%22">Lack J</searchLink>; Research Technologies Branch, Division of Intramural Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT, USA.; Integrated Data Sciences Section, Research Technologies Branch, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD, USA.<br /><searchLink fieldCode="AU" term="%22Relich+RF%22">Relich RF</searchLink>; Department of Pathology and Laboratory Medicine, Indiana University School of Medicine, Indianapolis, IN, USA.<br /><searchLink fieldCode="AU" term="%22Munster+VJ%22">Munster VJ</searchLink>; Division of Intramural Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT, USA.<br /><searchLink fieldCode="AU" term="%22Yinda+CK%22">Yinda CK</searchLink>; Division of Intramural Research, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Hamilton, MT, USA.
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  Data: <searchLink fieldCode="JN" term="%22101594885%22">Emerging microbes & infections</searchLink> [Emerg Microbes Infect] 2025 Dec; Vol. 14 (1), pp. 2494733. <i>Date of Electronic Publication: </i>2025 May 02.
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  Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22Taylor+%26+Francis%22">Taylor & Francis </searchLink><i>Country of Publication: </i>United States <i>NLM ID: </i>101594885 <i>Publication Model: </i>Print-Electronic <i>Cited Medium: </i>Internet <i>ISSN: </i>2222-1751 (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2222221751%22">22221751 </searchLink><i>NLM ISO Abbreviation: </i>Emerg Microbes Infect <i>Subsets: </i>MEDLINE
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        Text: English
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