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Accurate prediction of absolute prokaryotic abundance from DNA concentration.

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Title: Accurate prediction of absolute prokaryotic abundance from DNA concentration.
Authors: Wirbel J; Department of Medicine, Division of Hematology, Stanford University, Stanford, CA, USA. Electronic address: wirbel@stanford.edu., Andermann TM; Department of Medicine, Division of Infectious Diseases, University of North Carolina at Chapel Hill, NC, USA., Brooks EF; Department of Medicine, Division of Hematology, Stanford University, Stanford, CA, USA., Evans L; Department of Medicine, Division of Infectious Diseases, University of North Carolina at Chapel Hill, NC, USA., Groth A; Department of Medicine, Division of Infectious Diseases, University of North Carolina at Chapel Hill, NC, USA., Dvorak M; Department of Biology, Stanford University, Stanford, CA, USA., Chakraborty M; Department of Genetics, Stanford University, Stanford, CA, USA., Palushaj B; Department of Neurology & Neurological Sciences, Stanford University, Stanford, CA, USA., Reynolds GZM; Department of Genetics, Stanford University, Stanford, CA, USA., Porter IE; Department of Genetics, Stanford University, Stanford, CA, USA., Al Malki M; Department of Hematology & Hematopoietic Cell Transplantation, City of Hope National Medical Center, Duarte, CA, USA., Rezvani A; Blood and Marrow Transplantation and Cellular Therapy Unit, Stanford University School of Medicine, Stanford, CA, USA., Gooptu M; Hematologic Oncology, Dana-Farber Cancer Institute, Boston, MA, USA., Elmariah H; Blood and Marrow Transplant and Cellular Immunotherapy, H. Lee Moffitt Cancer and Research Center, Tampa, FL, USA., Runaas L; Center for International Blood and Marrow Transplant Research, Medical College of Wisconsin, Milwaukee, WI, USA., Fei T; Department of Epidemiology and Biostatistics, Memorial Sloan Kettering Cancer Center, New York City, NY, USA., Martens MJ; Center for International Blood and Marrow Transplant Research, Medical College of Wisconsin, Milwaukee, WI, USA; Division of Biostatistics, Medical College of Wisconsin, Milwaukee, WI, USA., Bolaños-Meade J; Department of Oncology, Johns Hopkins University School of Medicine, Baltimore, MD, USA., Hamadani M; Center for International Blood and Marrow Transplant Research, Medical College of Wisconsin, Milwaukee, WI, USA., Holtan S; Blood and Marrow Transplantation Section, Department of Medicine, Roswell Park Comprehensive Cancer Center, Buffalo, NY, USA., Jenq R; Department of Hematology & Hematopoietic Cell Transplantation, City of Hope National Medical Center, Duarte, CA, USA., Peled JU; Adult Bone Marrow Transplantation Service, Memorial Sloan Kettering Cancer Center, New York City, NY, USA; Department of Medicine, Weill Cornell Medical College, New York City, NY, USA., Horowitz MM; Center for International Blood and Marrow Transplant Research, Medical College of Wisconsin, Milwaukee, WI, USA., Poston KL; Department of Neurology & Neurological Sciences, Stanford University, Stanford, CA, USA., Saber W; Center for International Blood and Marrow Transplant Research, Medical College of Wisconsin, Milwaukee, WI, USA., Kean LS; Hematologic Oncology, Dana-Farber Cancer Institute, Boston, MA, USA; Division of Pediatric Hematology and Oncology, Boston Children's Hospital, Boston, MA, USA; Department of Pediatrics, Harvard Medical School, Boston, MA, USA., Perales MA; Department of Epidemiology and Biostatistics, Memorial Sloan Kettering Cancer Center, New York City, NY, USA; Adult Bone Marrow Transplantation Service, Memorial Sloan Kettering Cancer Center, New York City, NY, USA., Bhatt AS; Department of Medicine, Division of Hematology, Stanford University, Stanford, CA, USA; Department of Genetics, Stanford University, Stanford, CA, USA. Electronic address: asbhatt@stanford.edu.
Source: Cell reports methods [Cell Rep Methods] 2025 May 19; Vol. 5 (5), pp. 101030. Date of Electronic Publication: 2025 Apr 28.
Publication Type: Journal Article
Journal Info: Publisher: Elsevier Inc Country of Publication: United States NLM ID: 9918227360606676 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2667-2375 (Electronic) Linking ISSN: 26672375 NLM ISO Abbreviation: Cell Rep Methods Subsets: MEDLINE
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  Data: Accurate prediction of absolute prokaryotic abundance from DNA concentration.
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  Data: <searchLink fieldCode="AU" term="%22Wirbel+J%22">Wirbel J</searchLink>; Department of Medicine, Division of Hematology, Stanford University, Stanford, CA, USA. Electronic address: wirbel@stanford.edu.<br /><searchLink fieldCode="AU" term="%22Andermann+TM%22">Andermann TM</searchLink>; Department of Medicine, Division of Infectious Diseases, University of North Carolina at Chapel Hill, NC, USA.<br /><searchLink fieldCode="AU" term="%22Brooks+EF%22">Brooks EF</searchLink>; Department of Medicine, Division of Hematology, Stanford University, Stanford, CA, USA.<br /><searchLink fieldCode="AU" term="%22Evans+L%22">Evans L</searchLink>; Department of Medicine, Division of Infectious Diseases, University of North Carolina at Chapel Hill, NC, USA.<br /><searchLink fieldCode="AU" term="%22Groth+A%22">Groth A</searchLink>; Department of Medicine, Division of Infectious Diseases, University of North Carolina at Chapel Hill, NC, USA.<br /><searchLink fieldCode="AU" term="%22Dvorak+M%22">Dvorak M</searchLink>; Department of Biology, Stanford University, Stanford, CA, USA.<br /><searchLink fieldCode="AU" term="%22Chakraborty+M%22">Chakraborty M</searchLink>; Department of Genetics, Stanford University, Stanford, CA, USA.<br /><searchLink fieldCode="AU" term="%22Palushaj+B%22">Palushaj B</searchLink>; Department of Neurology & Neurological Sciences, Stanford University, Stanford, CA, USA.<br /><searchLink fieldCode="AU" term="%22Reynolds+GZM%22">Reynolds GZM</searchLink>; Department of Genetics, Stanford University, Stanford, CA, USA.<br /><searchLink fieldCode="AU" term="%22Porter+IE%22">Porter IE</searchLink>; Department of Genetics, Stanford University, Stanford, CA, USA.<br /><searchLink fieldCode="AU" term="%22Al+Malki+M%22">Al Malki M</searchLink>; Department of Hematology & Hematopoietic Cell Transplantation, City of Hope National Medical Center, Duarte, CA, USA.<br /><searchLink fieldCode="AU" term="%22Rezvani+A%22">Rezvani A</searchLink>; Blood and Marrow Transplantation and Cellular Therapy Unit, Stanford University School of Medicine, Stanford, CA, USA.<br /><searchLink fieldCode="AU" term="%22Gooptu+M%22">Gooptu M</searchLink>; Hematologic Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.<br /><searchLink fieldCode="AU" term="%22Elmariah+H%22">Elmariah H</searchLink>; Blood and Marrow Transplant and Cellular Immunotherapy, H. Lee Moffitt Cancer and Research Center, Tampa, FL, USA.<br /><searchLink fieldCode="AU" term="%22Runaas+L%22">Runaas L</searchLink>; Center for International Blood and Marrow Transplant Research, Medical College of Wisconsin, Milwaukee, WI, USA.<br /><searchLink fieldCode="AU" term="%22Fei+T%22">Fei T</searchLink>; Department of Epidemiology and Biostatistics, Memorial Sloan Kettering Cancer Center, New York City, NY, USA.<br /><searchLink fieldCode="AU" term="%22Martens+MJ%22">Martens MJ</searchLink>; Center for International Blood and Marrow Transplant Research, Medical College of Wisconsin, Milwaukee, WI, USA; Division of Biostatistics, Medical College of Wisconsin, Milwaukee, WI, USA.<br /><searchLink fieldCode="AU" term="%22Bolaños-Meade+J%22">Bolaños-Meade J</searchLink>; Department of Oncology, Johns Hopkins University School of Medicine, Baltimore, MD, USA.<br /><searchLink fieldCode="AU" term="%22Hamadani+M%22">Hamadani M</searchLink>; Center for International Blood and Marrow Transplant Research, Medical College of Wisconsin, Milwaukee, WI, USA.<br /><searchLink fieldCode="AU" term="%22Holtan+S%22">Holtan S</searchLink>; Blood and Marrow Transplantation Section, Department of Medicine, Roswell Park Comprehensive Cancer Center, Buffalo, NY, USA.<br /><searchLink fieldCode="AU" term="%22Jenq+R%22">Jenq R</searchLink>; Department of Hematology & Hematopoietic Cell Transplantation, City of Hope National Medical Center, Duarte, CA, USA.<br /><searchLink fieldCode="AU" term="%22Peled+JU%22">Peled JU</searchLink>; Adult Bone Marrow Transplantation Service, Memorial Sloan Kettering Cancer Center, New York City, NY, USA; Department of Medicine, Weill Cornell Medical College, New York City, NY, USA.<br /><searchLink fieldCode="AU" term="%22Horowitz+MM%22">Horowitz MM</searchLink>; Center for International Blood and Marrow Transplant Research, Medical College of Wisconsin, Milwaukee, WI, USA.<br /><searchLink fieldCode="AU" term="%22Poston+KL%22">Poston KL</searchLink>; Department of Neurology & Neurological Sciences, Stanford University, Stanford, CA, USA.<br /><searchLink fieldCode="AU" term="%22Saber+W%22">Saber W</searchLink>; Center for International Blood and Marrow Transplant Research, Medical College of Wisconsin, Milwaukee, WI, USA.<br /><searchLink fieldCode="AU" term="%22Kean+LS%22">Kean LS</searchLink>; Hematologic Oncology, Dana-Farber Cancer Institute, Boston, MA, USA; Division of Pediatric Hematology and Oncology, Boston Children's Hospital, Boston, MA, USA; Department of Pediatrics, Harvard Medical School, Boston, MA, USA.<br /><searchLink fieldCode="AU" term="%22Perales+MA%22">Perales MA</searchLink>; Department of Epidemiology and Biostatistics, Memorial Sloan Kettering Cancer Center, New York City, NY, USA; Adult Bone Marrow Transplantation Service, Memorial Sloan Kettering Cancer Center, New York City, NY, USA.<br /><searchLink fieldCode="AU" term="%22Bhatt+AS%22">Bhatt AS</searchLink>; Department of Medicine, Division of Hematology, Stanford University, Stanford, CA, USA; Department of Genetics, Stanford University, Stanford, CA, USA. Electronic address: asbhatt@stanford.edu.
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