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Genomic evolution reshapes cell-type diversification in the amniote brain.

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Title: Genomic evolution reshapes cell-type diversification in the amniote brain.
Authors: Chen D; BGI Research, Hangzhou 310030, China; BGI Research, Shenzhen 518083, China; Key Laboratory of Spatial Omics of Zhejiang Province, BGI Research, Hangzhou 310030, China; State Key Laboratory of Genome and Multi-omics Technologies, BGI Research, Hangzhou 310030, China., Zhuang Z; BGI Research, Hangzhou 310030, China; School of Biology and Biological Engineering, South China University of Technology, Guangzhou 510006, China; BGI Research, Shenzhen 518083, China; Key Laboratory of Spatial Omics of Zhejiang Province, BGI Research, Hangzhou 310030, China; State Key Laboratory of Genome and Multi-omics Technologies, BGI Research, Hangzhou 310030, China., Huang M; School of Life Sciences, Zhengzhou University, Zhengzhou 450001, China., Huang Y; BGI Research, Hangzhou 310030, China., Yan Y; BGI Research, Hangzhou 310030, China; School of Biology and Biological Engineering, South China University of Technology, Guangzhou 510006, China., Zhang Y; BGI Research, Hangzhou 310030, China; School of Biology and Biological Engineering, South China University of Technology, Guangzhou 510006, China., Lin Y; BGI Research, Hangzhou 310030, China; BGI Research, Shenzhen 518083, China; Key Laboratory of Spatial Omics of Zhejiang Province, BGI Research, Hangzhou 310030, China., Jin X; BGI Research, Hangzhou 310030, China; College of Life Sciences, University of Chinese Academy of Sciences, Beijing 100049, China; Key Laboratory of Spatial Omics of Zhejiang Province, BGI Research, Hangzhou 310030, China., Wang Y; College of Life Sciences, University of Chinese Academy of Sciences, Beijing 100049, China; BGI Research, Shenzhen 518083, China; HIM-BGI Omics Center, Hangzhou Institute of Medicine (HIM), Chinese Academy of Sciences, Hangzhou 310018, China., Huang J; The Institute of Biomedical and Health Engineering, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen-Hong Kong Institute of Brain Science-Shenzhen Fundamental Research Institutions, Shenzhen, 1068 Xueyuan Avenue, Shenzhen University Town, Nanshan District, Shenzhen 518055, China., Xu W; School of Life Sciences, Zhengzhou University, Zhengzhou 450001, China., Pan J; BGI Research, Hangzhou 310030, China., Wang H; The Institute of Biomedical and Health Engineering, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen-Hong Kong Institute of Brain Science-Shenzhen Fundamental Research Institutions, Shenzhen, 1068 Xueyuan Avenue, Shenzhen University Town, Nanshan District, Shenzhen 518055, China., Huang F; BGI Research, Hangzhou 310030, China; School of Biology and Biological Engineering, South China University of Technology, Guangzhou 510006, China; Key Laboratory of Spatial Omics of Zhejiang Province, BGI Research, Hangzhou 310030, China., Liao K; BGI Research, Hangzhou 310030, China; School of Biology and Biological Engineering, South China University of Technology, Guangzhou 510006, China., Cheng M; BGI Research, Hangzhou 310030, China; Key Laboratory of Spatial Omics of Zhejiang Province, BGI Research, Hangzhou 310030, China., Zhu Z; BGI Research, Hangzhou 310030, China; College of Life Sciences, University of Chinese Academy of Sciences, Beijing 100049, China; Key Laboratory of Spatial Omics of Zhejiang Province, BGI Research, Hangzhou 310030, China., Bai Y; BGI Research, Hangzhou 310030, China., Niu Z; BGI Research, Hangzhou 310030, China; College of Life Sciences, University of Chinese Academy of Sciences, Beijing 100049, China; Key Laboratory of Spatial Omics of Zhejiang Province, BGI Research, Hangzhou 310030, China., Zhang Z; BGI Research, Hangzhou 310030, China; Key Laboratory of Systems Health Science of Zhejiang Province, School of Life Science, Hangzhou Institute for Advanced Study, University of Chinese Academy of Sciences, Hangzhou 310024, China; Key Laboratory of Spatial Omics of Zhejiang Province, BGI Research, Hangzhou 310030, China., Xiang Y; BGI Research, Hangzhou 310030, China; Key Laboratory of Spatial Omics of Zhejiang Province, BGI Research, Hangzhou 310030, China; College of Life Sciences, Northwest University, Xi'an 710069, China., Wei X; China National GeneBank, BGI Research, Shenzhen 518120, China; Guangdong Genomics Data Center, BGl research, Shenzhen 518120, China., Yang T; China National GeneBank, BGI Research, Shenzhen 518120, China; Guangdong Genomics Data Center, BGl research, Shenzhen 518120, China., Zeng T; BGI Research, Hangzhou 310030, China; BGI Research, Shenzhen 518083, China., Dong Y; BGI Research, Hangzhou 310030, China; BGI Research, Shenzhen 518083, China., Lei Y; BGI Research, Hangzhou 310030, China; Key Laboratory of Spatial Omics of Zhejiang Province, BGI Research, Hangzhou 310030, China; Shanxi Medical University, BGI Collaborative Center for Future Medicine, Shanxi Medical University, Taiyuan 030001, China., Sun Y; Institute of Neuroscience, Key Laboratory of Brain Cognition and Brain-inspired Intelligence Technology, CAS Center for Excellence in Brain Science and Intelligence Technology, University of Chinese Academy of Sciences, Chinese Academy of Sciences, Shanghai 200031, China., Wang J; BGI Research, Hangzhou 310030, China., Yang H; College of Life Sciences, University of Chinese Academy of Sciences, Beijing 100049, China; BGI Research, Shenzhen 518083, China; HIM-BGI Omics Center, Hangzhou Institute of Medicine (HIM), Chinese Academy of Sciences, Hangzhou 310018, China; James D. Watson Institute of Genome Sciences, Hangzhou 310029, China., Sun Y; Institute of Neuroscience, Key Laboratory of Brain Cognition and Brain-inspired Intelligence Technology, CAS Center for Excellence in Brain Science and Intelligence Technology, University of Chinese Academy of Sciences, Chinese Academy of Sciences, Shanghai 200031, China., Cao G; Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen 518055, China., Poo M; Institute of Neuroscience, Key Laboratory of Brain Cognition and Brain-inspired Intelligence Technology, CAS Center for Excellence in Brain Science and Intelligence Technology, University of Chinese Academy of Sciences, Chinese Academy of Sciences, Shanghai 200031, China., Liu L; BGI Research, Hangzhou 310030, China; Key Laboratory of Spatial Omics of Zhejiang Province, BGI Research, Hangzhou 310030, China; Shanxi Medical University, BGI Collaborative Center for Future Medicine, Shanxi Medical University, Taiyuan 030001, China., Naumann RK; The Institute of Biomedical and Health Engineering, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen-Hong Kong Institute of Brain Science-Shenzhen Fundamental Research Institutions, Shenzhen, 1068 Xueyuan Avenue, Shenzhen University Town, Nanshan District, Shenzhen 518055, China. Electronic address: robert@siat.ac.cn., Xu C; Institute of Neuroscience, Key Laboratory of Brain Cognition and Brain-inspired Intelligence Technology, CAS Center for Excellence in Brain Science and Intelligence Technology, University of Chinese Academy of Sciences, Chinese Academy of Sciences, Shanghai 200031, China. Electronic address: chun.xu@ion.ac.cn., Wang Z; School of Life Sciences, Zhengzhou University, Zhengzhou 450001, China. Electronic address: wzl@zzu.edu.cn., Xu X; BGI Research, Hangzhou 310030, China; BGI Research, Shenzhen 518083, China; Shanxi Medical University, BGI Collaborative Center for Future Medicine, Shanxi Medical University, Taiyuan 030001, China. Electronic address: xuxun@genomics.cn., Liu S; BGI Research, Hangzhou 310030, China; BGI Research, Shenzhen 518083, China; Key Laboratory of Spatial Omics of Zhejiang Province, BGI Research, Hangzhou 310030, China; State Key Laboratory of Genome and Multi-omics Technologies, BGI Research, Hangzhou 310030, China. Electronic address: liushiping@genomics.cn.
Source: Developmental cell [Dev Cell] 2025 Jul 07; Vol. 60 (13), pp. 1900-1915.e5. Date of Electronic Publication: 2025 May 13.
Publication Type: Journal Article
Journal Info: Publisher: Cell Press Country of Publication: United States NLM ID: 101120028 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1878-1551 (Electronic) Linking ISSN: 15345807 NLM ISO Abbreviation: Dev Cell Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: Genomic evolution reshapes cell-type diversification in the amniote brain.
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  Data: <searchLink fieldCode="AU" term="%22Chen+D%22">Chen D</searchLink>; BGI Research, Hangzhou 310030, China; BGI Research, Shenzhen 518083, China; Key Laboratory of Spatial Omics of Zhejiang Province, BGI Research, Hangzhou 310030, China; State Key Laboratory of Genome and Multi-omics Technologies, BGI Research, Hangzhou 310030, China.<br /><searchLink fieldCode="AU" term="%22Zhuang+Z%22">Zhuang Z</searchLink>; BGI Research, Hangzhou 310030, China; School of Biology and Biological Engineering, South China University of Technology, Guangzhou 510006, China; BGI Research, Shenzhen 518083, China; Key Laboratory of Spatial Omics of Zhejiang Province, BGI Research, Hangzhou 310030, China; State Key Laboratory of Genome and Multi-omics Technologies, BGI Research, Hangzhou 310030, China.<br /><searchLink fieldCode="AU" term="%22Huang+M%22">Huang M</searchLink>; School of Life Sciences, Zhengzhou University, Zhengzhou 450001, China.<br /><searchLink fieldCode="AU" term="%22Huang+Y%22">Huang Y</searchLink>; BGI Research, Hangzhou 310030, China.<br /><searchLink fieldCode="AU" term="%22Yan+Y%22">Yan Y</searchLink>; BGI Research, Hangzhou 310030, China; School of Biology and Biological Engineering, South China University of Technology, Guangzhou 510006, China.<br /><searchLink fieldCode="AU" term="%22Zhang+Y%22">Zhang Y</searchLink>; BGI Research, Hangzhou 310030, China; School of Biology and Biological Engineering, South China University of Technology, Guangzhou 510006, China.<br /><searchLink fieldCode="AU" term="%22Lin+Y%22">Lin Y</searchLink>; BGI Research, Hangzhou 310030, China; BGI Research, Shenzhen 518083, China; Key Laboratory of Spatial Omics of Zhejiang Province, BGI Research, Hangzhou 310030, China.<br /><searchLink fieldCode="AU" term="%22Jin+X%22">Jin X</searchLink>; BGI Research, Hangzhou 310030, China; College of Life Sciences, University of Chinese Academy of Sciences, Beijing 100049, China; Key Laboratory of Spatial Omics of Zhejiang Province, BGI Research, Hangzhou 310030, China.<br /><searchLink fieldCode="AU" term="%22Wang+Y%22">Wang Y</searchLink>; College of Life Sciences, University of Chinese Academy of Sciences, Beijing 100049, China; BGI Research, Shenzhen 518083, China; HIM-BGI Omics Center, Hangzhou Institute of Medicine (HIM), Chinese Academy of Sciences, Hangzhou 310018, China.<br /><searchLink fieldCode="AU" term="%22Huang+J%22">Huang J</searchLink>; The Institute of Biomedical and Health Engineering, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen-Hong Kong Institute of Brain Science-Shenzhen Fundamental Research Institutions, Shenzhen, 1068 Xueyuan Avenue, Shenzhen University Town, Nanshan District, Shenzhen 518055, China.<br /><searchLink fieldCode="AU" term="%22Xu+W%22">Xu W</searchLink>; School of Life Sciences, Zhengzhou University, Zhengzhou 450001, China.<br /><searchLink fieldCode="AU" term="%22Pan+J%22">Pan J</searchLink>; BGI Research, Hangzhou 310030, China.<br /><searchLink fieldCode="AU" term="%22Wang+H%22">Wang H</searchLink>; The Institute of Biomedical and Health Engineering, Shenzhen Institute of Advanced Technology, Chinese Academy of Sciences, Shenzhen-Hong Kong Institute of Brain Science-Shenzhen Fundamental Research Institutions, Shenzhen, 1068 Xueyuan Avenue, Shenzhen University Town, Nanshan District, Shenzhen 518055, China.<br /><searchLink fieldCode="AU" term="%22Huang+F%22">Huang F</searchLink>; BGI Research, Hangzhou 310030, China; School of Biology and Biological Engineering, South China University of Technology, Guangzhou 510006, China; Key Laboratory of Spatial Omics of Zhejiang Province, BGI Research, Hangzhou 310030, China.<br /><searchLink fieldCode="AU" term="%22Liao+K%22">Liao K</searchLink>; BGI Research, Hangzhou 310030, China; School of Biology and Biological Engineering, South China University of Technology, Guangzhou 510006, China.<br /><searchLink fieldCode="AU" term="%22Cheng+M%22">Cheng M</searchLink>; BGI Research, Hangzhou 310030, China; Key Laboratory of Spatial Omics of Zhejiang Province, BGI Research, Hangzhou 310030, China.<br /><searchLink fieldCode="AU" term="%22Zhu+Z%22">Zhu Z</searchLink>; BGI Research, Hangzhou 310030, China; College of Life Sciences, University of Chinese Academy of Sciences, Beijing 100049, China; Key Laboratory of Spatial Omics of Zhejiang Province, BGI Research, Hangzhou 310030, China.<br /><searchLink fieldCode="AU" term="%22Bai+Y%22">Bai Y</searchLink>; 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China National GeneBank, BGI Research, Shenzhen 518120, China; Guangdong Genomics Data Center, BGl research, Shenzhen 518120, China.<br /><searchLink fieldCode="AU" term="%22Yang+T%22">Yang T</searchLink>; China National GeneBank, BGI Research, Shenzhen 518120, China; Guangdong Genomics Data Center, BGl research, Shenzhen 518120, China.<br /><searchLink fieldCode="AU" term="%22Zeng+T%22">Zeng T</searchLink>; BGI Research, Hangzhou 310030, China; BGI Research, Shenzhen 518083, China.<br /><searchLink fieldCode="AU" term="%22Dong+Y%22">Dong Y</searchLink>; BGI Research, Hangzhou 310030, China; BGI Research, Shenzhen 518083, China.<br /><searchLink fieldCode="AU" term="%22Lei+Y%22">Lei Y</searchLink>; BGI Research, Hangzhou 310030, China; Key Laboratory of Spatial Omics of Zhejiang Province, BGI Research, Hangzhou 310030, China; Shanxi Medical University, BGI Collaborative Center for Future Medicine, Shanxi Medical University, Taiyuan 030001, China.<br /><searchLink fieldCode="AU" term="%22Sun+Y%22">Sun Y</searchLink>; 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