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mlstverse-web: advancing real-time identification of mycobacteria from sputum using targeted sequencing NALC-Seq.

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Title: mlstverse-web: advancing real-time identification of mycobacteria from sputum using targeted sequencing NALC-Seq.
Authors: Matsumoto Y; Department of Infection Metagenomics, Bioinformatics Center, Research Institute for Microbial Diseases (RIMD), Osaka University, Suita, Osaka, Japan., Fukushima K; Department of Infection Metagenomics, Bioinformatics Center, Research Institute for Microbial Diseases (RIMD), Osaka University, Suita, Osaka, Japan. fukushima@imed3.med.osaka-u.ac.jp.; Department of Clinical Laboratory, National Hospital Organization, Osaka Toneyama Medical Center, Toyonaka, Osaka, Japan. fukushima@imed3.med.osaka-u.ac.jp.; Department of Respiratory Medicine and Clinical Immunology, Osaka University Graduate School of Medicine, Suita, Osaka, Japan. fukushima@imed3.med.osaka-u.ac.jp., Zhang S; Department of Infection Metagenomics, Bioinformatics Center, Research Institute for Microbial Diseases (RIMD), Osaka University, Suita, Osaka, Japan., Fauzyah Y; Department of Infection Metagenomics, Bioinformatics Center, Research Institute for Microbial Diseases (RIMD), Osaka University, Suita, Osaka, Japan., Motooka D; Department of Infection Metagenomics, Bioinformatics Center, Research Institute for Microbial Diseases (RIMD), Osaka University, Suita, Osaka, Japan.; Integrated Frontier Research for Medical Science Division, Institute for Open and Transdisciplinary Research Initiatives, Osaka University, Suita, Osaka, Japan., Saito H; Department of Clinical Laboratory, National Hospital Organization, Osaka Toneyama Medical Center, Toyonaka, Osaka, Japan., Yamauchi J; Department of Clinical Laboratory, National Hospital Organization, Osaka Toneyama Medical Center, Toyonaka, Osaka, Japan., Nitta T; Department of Clinical Laboratory, National Hospital Organization, Osaka Toneyama Medical Center, Toyonaka, Osaka, Japan., Nii T; Department of Respiratory Medicine, National Hospital Organization, Osaka Toneyama Medical Center, Toyonaka, Osaka, Japan., Matsuki T; Department of Respiratory Medicine, National Hospital Organization, Osaka Toneyama Medical Center, Toyonaka, Osaka, Japan., Tsujino K; Department of Respiratory Medicine, National Hospital Organization, Osaka Toneyama Medical Center, Toyonaka, Osaka, Japan., Miki K; Department of Respiratory Medicine, National Hospital Organization, Osaka Toneyama Medical Center, Toyonaka, Osaka, Japan., Kida H; Department of Clinical Laboratory, National Hospital Organization, Osaka Toneyama Medical Center, Toyonaka, Osaka, Japan., Nakamura S; Department of Infection Metagenomics, Bioinformatics Center, Research Institute for Microbial Diseases (RIMD), Osaka University, Suita, Osaka, Japan. nshota@gen-info.osaka-u.ac.jp.; Integrated Frontier Research for Medical Science Division, Institute for Open and Transdisciplinary Research Initiatives, Osaka University, Suita, Osaka, Japan. nshota@gen-info.osaka-u.ac.jp.; Center for Infectious Disease Education and Research, Osaka University, Suita, Osaka, Japan. nshota@gen-info.osaka-u.ac.jp.
Source: Functional & integrative genomics [Funct Integr Genomics] 2025 May 21; Vol. 25 (1), pp. 105. Date of Electronic Publication: 2025 May 21.
Publication Type: Journal Article
Journal Info: Publisher: Springer Country of Publication: Germany NLM ID: 100939343 Publication Model: Electronic Cited Medium: Internet ISSN: 1438-7948 (Electronic) Linking ISSN: 1438793X NLM ISO Abbreviation: Funct Integr Genomics Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: mlstverse-web: advancing real-time identification of mycobacteria from sputum using targeted sequencing NALC-Seq.
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  Data: <searchLink fieldCode="AU" term="%22Matsumoto+Y%22">Matsumoto Y</searchLink>; Department of Infection Metagenomics, Bioinformatics Center, Research Institute for Microbial Diseases (RIMD), Osaka University, Suita, Osaka, Japan.<br /><searchLink fieldCode="AU" term="%22Fukushima+K%22">Fukushima K</searchLink>; Department of Infection Metagenomics, Bioinformatics Center, Research Institute for Microbial Diseases (RIMD), Osaka University, Suita, Osaka, Japan. fukushima@imed3.med.osaka-u.ac.jp.; Department of Clinical Laboratory, National Hospital Organization, Osaka Toneyama Medical Center, Toyonaka, Osaka, Japan. fukushima@imed3.med.osaka-u.ac.jp.; Department of Respiratory Medicine and Clinical Immunology, Osaka University Graduate School of Medicine, Suita, Osaka, Japan. fukushima@imed3.med.osaka-u.ac.jp.<br /><searchLink fieldCode="AU" term="%22Zhang+S%22">Zhang S</searchLink>; Department of Infection Metagenomics, Bioinformatics Center, Research Institute for Microbial Diseases (RIMD), Osaka University, Suita, Osaka, Japan.<br /><searchLink fieldCode="AU" term="%22Fauzyah+Y%22">Fauzyah Y</searchLink>; Department of Infection Metagenomics, Bioinformatics Center, Research Institute for Microbial Diseases (RIMD), Osaka University, Suita, Osaka, Japan.<br /><searchLink fieldCode="AU" term="%22Motooka+D%22">Motooka D</searchLink>; Department of Infection Metagenomics, Bioinformatics Center, Research Institute for Microbial Diseases (RIMD), Osaka University, Suita, Osaka, Japan.; Integrated Frontier Research for Medical Science Division, Institute for Open and Transdisciplinary Research Initiatives, Osaka University, Suita, Osaka, Japan.<br /><searchLink fieldCode="AU" term="%22Saito+H%22">Saito H</searchLink>; Department of Clinical Laboratory, National Hospital Organization, Osaka Toneyama Medical Center, Toyonaka, Osaka, Japan.<br /><searchLink fieldCode="AU" term="%22Yamauchi+J%22">Yamauchi J</searchLink>; Department of Clinical Laboratory, National Hospital Organization, Osaka Toneyama Medical Center, Toyonaka, Osaka, Japan.<br /><searchLink fieldCode="AU" term="%22Nitta+T%22">Nitta T</searchLink>; Department of Clinical Laboratory, National Hospital Organization, Osaka Toneyama Medical Center, Toyonaka, Osaka, Japan.<br /><searchLink fieldCode="AU" term="%22Nii+T%22">Nii T</searchLink>; Department of Respiratory Medicine, National Hospital Organization, Osaka Toneyama Medical Center, Toyonaka, Osaka, Japan.<br /><searchLink fieldCode="AU" term="%22Matsuki+T%22">Matsuki T</searchLink>; Department of Respiratory Medicine, National Hospital Organization, Osaka Toneyama Medical Center, Toyonaka, Osaka, Japan.<br /><searchLink fieldCode="AU" term="%22Tsujino+K%22">Tsujino K</searchLink>; Department of Respiratory Medicine, National Hospital Organization, Osaka Toneyama Medical Center, Toyonaka, Osaka, Japan.<br /><searchLink fieldCode="AU" term="%22Miki+K%22">Miki K</searchLink>; Department of Respiratory Medicine, National Hospital Organization, Osaka Toneyama Medical Center, Toyonaka, Osaka, Japan.<br /><searchLink fieldCode="AU" term="%22Kida+H%22">Kida H</searchLink>; Department of Clinical Laboratory, National Hospital Organization, Osaka Toneyama Medical Center, Toyonaka, Osaka, Japan.<br /><searchLink fieldCode="AU" term="%22Nakamura+S%22">Nakamura S</searchLink>; Department of Infection Metagenomics, Bioinformatics Center, Research Institute for Microbial Diseases (RIMD), Osaka University, Suita, Osaka, Japan. nshota@gen-info.osaka-u.ac.jp.; Integrated Frontier Research for Medical Science Division, Institute for Open and Transdisciplinary Research Initiatives, Osaka University, Suita, Osaka, Japan. nshota@gen-info.osaka-u.ac.jp.; Center for Infectious Disease Education and Research, Osaka University, Suita, Osaka, Japan. nshota@gen-info.osaka-u.ac.jp.
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        Value: 10.1007/s10142-025-01609-x
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        Text: English
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