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MORE-RNAseq: a pipeline for quantifying retrotransposition-capable LINE1 expression based on RNA-seq data.

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Title: MORE-RNAseq: a pipeline for quantifying retrotransposition-capable LINE1 expression based on RNA-seq data.
Authors: Nakachi Y; Department of Molecular Brain Science, Graduate School of Medical Sciences, Kumamoto University, Kumamoto, Japan., Du J; Department of Molecular Brain Science, Graduate School of Medical Sciences, Kumamoto University, Kumamoto, Japan.; Department of Geriatric Psychiatry, The Affiliated Mental Health Center of Jiangnan University, Wuxi, China., Watanabe R; Department of Molecular Brain Science, Graduate School of Medical Sciences, Kumamoto University, Kumamoto, Japan.; Department of Psychiatry, Icahn School of Medicine at Mount Sinai, New York, NY, United States., Yanagida Y; Department of Molecular Brain Science, Graduate School of Medical Sciences, Kumamoto University, Kumamoto, Japan., Bundo M; Department of Molecular Brain Science, Graduate School of Medical Sciences, Kumamoto University, Kumamoto, Japan., Iwamoto K; Department of Molecular Brain Science, Graduate School of Medical Sciences, Kumamoto University, Kumamoto, Japan.
Source: Frontiers in bioinformatics [Front Bioinform] 2025 May 22; Vol. 5, pp. 1575346. Date of Electronic Publication: 2025 May 22 (Print Publication: 2025).
Publication Type: Journal Article
Journal Info: Publisher: Frontiers Media S.A Country of Publication: Switzerland NLM ID: 9918227263306676 Publication Model: eCollection Cited Medium: Internet ISSN: 2673-7647 (Electronic) Linking ISSN: 26737647 NLM ISO Abbreviation: Front Bioinform Subsets: PubMed not MEDLINE
Database: MEDLINE Ultimate
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  Data: <searchLink fieldCode="AU" term="%22Nakachi+Y%22">Nakachi Y</searchLink>; Department of Molecular Brain Science, Graduate School of Medical Sciences, Kumamoto University, Kumamoto, Japan.<br /><searchLink fieldCode="AU" term="%22Du+J%22">Du J</searchLink>; Department of Molecular Brain Science, Graduate School of Medical Sciences, Kumamoto University, Kumamoto, Japan.; Department of Geriatric Psychiatry, The Affiliated Mental Health Center of Jiangnan University, Wuxi, China.<br /><searchLink fieldCode="AU" term="%22Watanabe+R%22">Watanabe R</searchLink>; Department of Molecular Brain Science, Graduate School of Medical Sciences, Kumamoto University, Kumamoto, Japan.; Department of Psychiatry, Icahn School of Medicine at Mount Sinai, New York, NY, United States.<br /><searchLink fieldCode="AU" term="%22Yanagida+Y%22">Yanagida Y</searchLink>; Department of Molecular Brain Science, Graduate School of Medical Sciences, Kumamoto University, Kumamoto, Japan.<br /><searchLink fieldCode="AU" term="%22Bundo+M%22">Bundo M</searchLink>; Department of Molecular Brain Science, Graduate School of Medical Sciences, Kumamoto University, Kumamoto, Japan.<br /><searchLink fieldCode="AU" term="%22Iwamoto+K%22">Iwamoto K</searchLink>; Department of Molecular Brain Science, Graduate School of Medical Sciences, Kumamoto University, Kumamoto, Japan.
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  Data: <searchLink fieldCode="JN" term="%229918227263306676%22">Frontiers in bioinformatics</searchLink> [Front Bioinform] 2025 May 22; Vol. 5, pp. 1575346. <i>Date of Electronic Publication: </i>2025 May 22 (<i>Print Publication: </i>2025).
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  Data: <i>Publisher: </i><searchLink fieldCode="PB" term="%22Frontiers+Media+S%2EA%22">Frontiers Media S.A </searchLink><i>Country of Publication: </i>Switzerland <i>NLM ID: </i>9918227263306676 <i>Publication Model: </i>eCollection <i>Cited Medium: </i>Internet <i>ISSN: </i>2673-7647 (Electronic) <i>Linking ISSN: </i><searchLink fieldCode="IS" term="%2226737647%22">26737647 </searchLink><i>NLM ISO Abbreviation: </i>Front Bioinform <i>Subsets: </i>PubMed not MEDLINE
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        Value: 10.3389/fbinf.2025.1575346
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