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Identifying genomic surveillance gaps in Africa for the global public health response to West Nile virus: a systematic review.

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Title: Identifying genomic surveillance gaps in Africa for the global public health response to West Nile virus: a systematic review.
Authors: Moir M; Centre for Epidemic Response and Innovation, School for Data Science and Computational Thinking, Stellenbosch University, Matieland, South Africa. Electronic address: monikam@sun.ac.za., Sitharam N; Centre for Epidemic Response and Innovation, School for Data Science and Computational Thinking, Stellenbosch University, Matieland, South Africa., Hofstra LM; Centre for Epidemic Response and Innovation, School for Data Science and Computational Thinking, Stellenbosch University, Matieland, South Africa., Dor G; Centre for Epidemic Response and Innovation, School for Data Science and Computational Thinking, Stellenbosch University, Matieland, South Africa., Mwanyika G; Centre for Epidemic Response and Innovation, School for Data Science and Computational Thinking, Stellenbosch University, Matieland, South Africa; Department of Applied Sciences, Mbeya University of Science and Technology, Mbeya, Tanzania., Ramphal Y; Centre for Epidemic Response and Innovation, School for Data Science and Computational Thinking, Stellenbosch University, Matieland, South Africa., Reichmuth ML; Institute of Social and Preventive Medicine, University of Bern, Bern, Switzerland., San JE; Duke Human Vaccine Institute, Duke University, Durham, NC, USA; School of Laboratory Medicine and Medical Sciences, University of KwaZulu-Natal, Durban, South Africa., Gifford R; Centre for Epidemic Response and Innovation, School for Data Science and Computational Thinking, Stellenbosch University, Matieland, South Africa., Wilkinson E; Centre for Epidemic Response and Innovation, School for Data Science and Computational Thinking, Stellenbosch University, Matieland, South Africa., Tshiabuila D; Centre for Epidemic Response and Innovation, School for Data Science and Computational Thinking, Stellenbosch University, Matieland, South Africa., Preiser W; Division of Medical Virology, Faculty of Medicine and Health Sciences, Stellenbosch University, Matieland, South Africa; National Health Laboratory Service, Tygerberg Campus, Cape Town, South Africa., Konou AA; Laboratoire de Biologie moléculaire et d'Immunologie (BIOLIM/FSS-UL), Université de Lomé, Lomé, Togo., Bitew M; Bio and Emerging Technology Institute, Addis Ababa, Ethiopia., Onoja AB; Department of Virology, University of Ibadan, Ibadan, Nigeria., Paganotti GM; Botswana-University of Pennsylvania Partnership, Gaborone, Botswana; Division of Infectious Diseases, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA., Abera A; Ethiopian Public Health Institute, Addis Ababa, Ethiopia., Maror JA; National Public Health Laboratory, Ministry of Health, Juba, South Sudan., Kayiwa J; Uganda Virus Research Institute, Entebbe, Uganda., Abuelmaali S; National Public Health Laboratory, Khartoum, Sudan., Lusamaki EK; Institut National de Recherche Biomédicale, Kinshasa, Democratic Republic of the Congo; Service de Microbiologie, Département de Biologie Médicale, Université de Kinshasa, Kinshasa, Democratic Republic of the Congo; TransVIHMI, Université de Montpellier, INSERM, IRD, Montpellier, France., Venter M; Emerging Viral Threat, One Health Surveillance and Vaccines Division, Infectious Diseases and Oncology Research Institute, University of the Witwatersrand, Johannesburg, South Africa; Centre for Emerging Arbo and Respiratory Virus Research, Department Medical Virology, Faculty of Health, University of Pretoria, Pretoria, South Africa., Burt F; Division of Virology, National Health Laboratory Services, Universitas Hospital, Bloemfontein, South Africa; Pathogen Research Laboratory, Division of Virology, University of the Free State, Bloemfontein, South Africa., Baxter C; Centre for Epidemic Response and Innovation, School for Data Science and Computational Thinking, Stellenbosch University, Matieland, South Africa., Lessells R; KwaZulu-Natal Research Innovation and Sequencing Platform, University of KwaZulu-Natal, Durban, South Africa., de Oliveira T; Centre for Epidemic Response and Innovation, School for Data Science and Computational Thinking, Stellenbosch University, Matieland, South Africa; KwaZulu-Natal Research Innovation and Sequencing Platform, University of KwaZulu-Natal, Durban, South Africa., Tegally H; Centre for Epidemic Response and Innovation, School for Data Science and Computational Thinking, Stellenbosch University, Matieland, South Africa.
Corporate Authors: CLIMADE Consortium
Source: The Lancet. Microbe [Lancet Microbe] 2025 Oct; Vol. 6 (10), pp. 101176. Date of Electronic Publication: 2025 Jul 24.
Publication Type: Journal Article; Systematic Review
Journal Info: Publisher: Elsevier Ltd Country of Publication: England NLM ID: 101769019 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 2666-5247 (Electronic) Linking ISSN: 26665247 NLM ISO Abbreviation: Lancet Microbe Subsets: MEDLINE
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  Data: Identifying genomic surveillance gaps in Africa for the global public health response to West Nile virus: a systematic review.
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  Data: <searchLink fieldCode="AU" term="%22Moir+M%22">Moir M</searchLink>; Centre for Epidemic Response and Innovation, School for Data Science and Computational Thinking, Stellenbosch University, Matieland, South Africa. Electronic address: monikam@sun.ac.za.<br /><searchLink fieldCode="AU" term="%22Sitharam+N%22">Sitharam N</searchLink>; Centre for Epidemic Response and Innovation, School for Data Science and Computational Thinking, Stellenbosch University, Matieland, South Africa.<br /><searchLink fieldCode="AU" term="%22Hofstra+LM%22">Hofstra LM</searchLink>; Centre for Epidemic Response and Innovation, School for Data Science and Computational Thinking, Stellenbosch University, Matieland, South Africa.<br /><searchLink fieldCode="AU" term="%22Dor+G%22">Dor G</searchLink>; Centre for Epidemic Response and Innovation, School for Data Science and Computational Thinking, Stellenbosch University, Matieland, South Africa.<br /><searchLink fieldCode="AU" term="%22Mwanyika+G%22">Mwanyika G</searchLink>; Centre for Epidemic Response and Innovation, School for Data Science and Computational Thinking, Stellenbosch University, Matieland, South Africa; Department of Applied Sciences, Mbeya University of Science and Technology, Mbeya, Tanzania.<br /><searchLink fieldCode="AU" term="%22Ramphal+Y%22">Ramphal Y</searchLink>; Centre for Epidemic Response and Innovation, School for Data Science and Computational Thinking, Stellenbosch University, Matieland, South Africa.<br /><searchLink fieldCode="AU" term="%22Reichmuth+ML%22">Reichmuth ML</searchLink>; Institute of Social and Preventive Medicine, University of Bern, Bern, Switzerland.<br /><searchLink fieldCode="AU" term="%22San+JE%22">San JE</searchLink>; Duke Human Vaccine Institute, Duke University, Durham, NC, USA; School of Laboratory Medicine and Medical Sciences, University of KwaZulu-Natal, Durban, South Africa.<br /><searchLink fieldCode="AU" term="%22Gifford+R%22">Gifford R</searchLink>; Centre for Epidemic Response and Innovation, School for Data Science and Computational Thinking, Stellenbosch University, Matieland, South Africa.<br /><searchLink fieldCode="AU" term="%22Wilkinson+E%22">Wilkinson E</searchLink>; Centre for Epidemic Response and Innovation, School for Data Science and Computational Thinking, Stellenbosch University, Matieland, South Africa.<br /><searchLink fieldCode="AU" term="%22Tshiabuila+D%22">Tshiabuila D</searchLink>; Centre for Epidemic Response and Innovation, School for Data Science and Computational Thinking, Stellenbosch University, Matieland, South Africa.<br /><searchLink fieldCode="AU" term="%22Preiser+W%22">Preiser W</searchLink>; Division of Medical Virology, Faculty of Medicine and Health Sciences, Stellenbosch University, Matieland, South Africa; National Health Laboratory Service, Tygerberg Campus, Cape Town, South Africa.<br /><searchLink fieldCode="AU" term="%22Konou+AA%22">Konou AA</searchLink>; Laboratoire de Biologie moléculaire et d'Immunologie (BIOLIM/FSS-UL), Université de Lomé, Lomé, Togo.<br /><searchLink fieldCode="AU" term="%22Bitew+M%22">Bitew M</searchLink>; Bio and Emerging Technology Institute, Addis Ababa, Ethiopia.<br /><searchLink fieldCode="AU" term="%22Onoja+AB%22">Onoja AB</searchLink>; Department of Virology, University of Ibadan, Ibadan, Nigeria.<br /><searchLink fieldCode="AU" term="%22Paganotti+GM%22">Paganotti GM</searchLink>; Botswana-University of Pennsylvania Partnership, Gaborone, Botswana; Division of Infectious Diseases, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.<br /><searchLink fieldCode="AU" term="%22Abera+A%22">Abera A</searchLink>; Ethiopian Public Health Institute, Addis Ababa, Ethiopia.<br /><searchLink fieldCode="AU" term="%22Maror+JA%22">Maror JA</searchLink>; National Public Health Laboratory, Ministry of Health, Juba, South Sudan.<br /><searchLink fieldCode="AU" term="%22Kayiwa+J%22">Kayiwa J</searchLink>; Uganda Virus Research Institute, Entebbe, Uganda.<br /><searchLink fieldCode="AU" term="%22Abuelmaali+S%22">Abuelmaali S</searchLink>; National Public Health Laboratory, Khartoum, Sudan.<br /><searchLink fieldCode="AU" term="%22Lusamaki+EK%22">Lusamaki EK</searchLink>; Institut National de Recherche Biomédicale, Kinshasa, Democratic Republic of the Congo; Service de Microbiologie, Département de Biologie Médicale, Université de Kinshasa, Kinshasa, Democratic Republic of the Congo; TransVIHMI, Université de Montpellier, INSERM, IRD, Montpellier, France.<br /><searchLink fieldCode="AU" term="%22Venter+M%22">Venter M</searchLink>; Emerging Viral Threat, One Health Surveillance and Vaccines Division, Infectious Diseases and Oncology Research Institute, University of the Witwatersrand, Johannesburg, South Africa; Centre for Emerging Arbo and Respiratory Virus Research, Department Medical Virology, Faculty of Health, University of Pretoria, Pretoria, South Africa.<br /><searchLink fieldCode="AU" term="%22Burt+F%22">Burt F</searchLink>; Division of Virology, National Health Laboratory Services, Universitas Hospital, Bloemfontein, South Africa; Pathogen Research Laboratory, Division of Virology, University of the Free State, Bloemfontein, South Africa.<br /><searchLink fieldCode="AU" term="%22Baxter+C%22">Baxter C</searchLink>; Centre for Epidemic Response and Innovation, School for Data Science and Computational Thinking, Stellenbosch University, Matieland, South Africa.<br /><searchLink fieldCode="AU" term="%22Lessells+R%22">Lessells R</searchLink>; KwaZulu-Natal Research Innovation and Sequencing Platform, University of KwaZulu-Natal, Durban, South Africa.<br /><searchLink fieldCode="AU" term="%22de+Oliveira+T%22">de Oliveira T</searchLink>; Centre for Epidemic Response and Innovation, School for Data Science and Computational Thinking, Stellenbosch University, Matieland, South Africa; KwaZulu-Natal Research Innovation and Sequencing Platform, University of KwaZulu-Natal, Durban, South Africa.<br /><searchLink fieldCode="AU" term="%22Tegally+H%22">Tegally H</searchLink>; Centre for Epidemic Response and Innovation, School for Data Science and Computational Thinking, Stellenbosch University, Matieland, South Africa.
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