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Large- and small-scale population structure of Xanthomonas oryzae pv. oryzicola, a bacterial pathogen of rice.

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Title: Large- and small-scale population structure of Xanthomonas oryzae pv. oryzicola, a bacterial pathogen of rice.
Authors: Sicard A; Univ Montpellier, IRD, CIRAD, INRAE, Institut Agro, Plant Health Institute of Montpellier, Montpellier, France.; INRAE, UMR SVQV, Université de Strasbourg, Colmar, France., Carpenter SCD; Plant Pathology and Plant-Microbe Biology Section, School of Integrative Plant Science, Cornell University, Ithaca, New York, USA., Diallo A; Univ Montpellier, IRD, CIRAD, INRAE, Institut Agro, Plant Health Institute of Montpellier, Montpellier, France., Baruah S; Plant Pathology and Plant-Microbe Biology Section, School of Integrative Plant Science, Cornell University, Ithaca, New York, USA., Tekete C; Laboratoire de Biologie Moléculaire Appliquée, des Techniques et des Technologies de Bamako, Faculté des Sciences et Techniques, Universite des Sciences, Bamako, Mali., Konate L; Laboratoire de Biologie Moléculaire Appliquée, des Techniques et des Technologies de Bamako, Faculté des Sciences et Techniques, Universite des Sciences, Bamako, Mali., Keita I; Laboratoire de Biologie Moléculaire Appliquée, des Techniques et des Technologies de Bamako, Faculté des Sciences et Techniques, Universite des Sciences, Bamako, Mali., Doucoure H; Laboratoire de Biologie Moléculaire Appliquée, des Techniques et des Technologies de Bamako, Faculté des Sciences et Techniques, Universite des Sciences, Bamako, Mali., Nguyen PD; Department of Molecular Pathology, Agricultural Genetics Institute, Hanoi, Vietnam., Cao QL; Department of Molecular Pathology, Agricultural Genetics Institute, Hanoi, Vietnam., Sarra S; Centre Régional de Recherche Agronomique de Niono, Institut d'Economie Rural, Bamako, Mali., Dembele M; Centre Régional de Recherche Agronomique de Niono, Institut d'Economie Rural, Bamako, Mali., Tollenaere C; Univ Montpellier, IRD, CIRAD, INRAE, Institut Agro, Plant Health Institute of Montpellier, Montpellier, France., Poulin L; Univ Montpellier, IRD, CIRAD, INRAE, Institut Agro, Plant Health Institute of Montpellier, Montpellier, France., Tall H; Univ Montpellier, IRD, CIRAD, INRAE, Institut Agro, Plant Health Institute of Montpellier, Montpellier, France.; Institut Sénégalais de Recherches Agricoles, Kolda, Senegal., Blondin L; Univ Montpellier, IRD, CIRAD, INRAE, Institut Agro, Plant Health Institute of Montpellier, Montpellier, France., Verdier V; Univ Montpellier, IRD, CIRAD, INRAE, Institut Agro, Plant Health Institute of Montpellier, Montpellier, France., Koebnik R; Univ Montpellier, IRD, CIRAD, INRAE, Institut Agro, Plant Health Institute of Montpellier, Montpellier, France., Zougrana S; INERA, Institut de l'Environnement et de Recherches Agricoles, Bobo-Dioulasso, Burkina Faso., Raveloson H; Centre Régional de Recherche du FOFIFA/DP SPAD, Antsirabe, Madagascar.; Université de Vakinankaratra, Antsirabe, Madagascar., Gagnevin L; Univ Montpellier, IRD, CIRAD, INRAE, Institut Agro, Plant Health Institute of Montpellier, Montpellier, France., Onaga G; National Agricultural Research Organization, Kampala, Uganda.; Africa Rice Center, Bouake, Côte d'Ivoire., Cunnac S; Univ Montpellier, IRD, CIRAD, INRAE, Institut Agro, Plant Health Institute of Montpellier, Montpellier, France., Vernière C; Univ Montpellier, IRD, CIRAD, INRAE, Institut Agro, Plant Health Institute of Montpellier, Montpellier, France., Wonni I; INERA, Institut de l'Environnement et de Recherches Agricoles, Bobo-Dioulasso, Burkina Faso., Koita O; Laboratoire de Biologie Moléculaire Appliquée, des Techniques et des Technologies de Bamako, Faculté des Sciences et Techniques, Universite des Sciences, Bamako, Mali., Szurek B; Univ Montpellier, IRD, CIRAD, INRAE, Institut Agro, Plant Health Institute of Montpellier, Montpellier, France., Bogdanove A; Plant Pathology and Plant-Microbe Biology Section, School of Integrative Plant Science, Cornell University, Ithaca, New York, USA., Hutin M; Univ Montpellier, IRD, CIRAD, INRAE, Institut Agro, Plant Health Institute of Montpellier, Montpellier, France.; Plant Pathology and Plant-Microbe Biology Section, School of Integrative Plant Science, Cornell University, Ithaca, New York, USA.
Source: Applied and environmental microbiology [Appl Environ Microbiol] 2025 Oct 22; Vol. 91 (10), pp. e0112125. Date of Electronic Publication: 2025 Sep 08.
Publication Type: Journal Article; Research Support, Non-U.S. Gov't
Journal Info: Publisher: American Society for Microbiology Country of Publication: United States NLM ID: 7605801 Publication Model: Print-Electronic Cited Medium: Internet ISSN: 1098-5336 (Electronic) Linking ISSN: 00992240 NLM ISO Abbreviation: Appl Environ Microbiol Subsets: MEDLINE
Database: MEDLINE Ultimate
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  Data: Large- and small-scale population structure of Xanthomonas oryzae pv. oryzicola, a bacterial pathogen of rice.
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  Data: <searchLink fieldCode="AU" term="%22Sicard+A%22">Sicard A</searchLink>; Univ Montpellier, IRD, CIRAD, INRAE, Institut Agro, Plant Health Institute of Montpellier, Montpellier, France.; INRAE, UMR SVQV, Université de Strasbourg, Colmar, France.<br /><searchLink fieldCode="AU" term="%22Carpenter+SCD%22">Carpenter SCD</searchLink>; Plant Pathology and Plant-Microbe Biology Section, School of Integrative Plant Science, Cornell University, Ithaca, New York, USA.<br /><searchLink fieldCode="AU" term="%22Diallo+A%22">Diallo A</searchLink>; Univ Montpellier, IRD, CIRAD, INRAE, Institut Agro, Plant Health Institute of Montpellier, Montpellier, France.<br /><searchLink fieldCode="AU" term="%22Baruah+S%22">Baruah S</searchLink>; Plant Pathology and Plant-Microbe Biology Section, School of Integrative Plant Science, Cornell University, Ithaca, New York, USA.<br /><searchLink fieldCode="AU" term="%22Tekete+C%22">Tekete C</searchLink>; Laboratoire de Biologie Moléculaire Appliquée, des Techniques et des Technologies de Bamako, Faculté des Sciences et Techniques, Universite des Sciences, Bamako, Mali.<br /><searchLink fieldCode="AU" term="%22Konate+L%22">Konate L</searchLink>; Laboratoire de Biologie Moléculaire Appliquée, des Techniques et des Technologies de Bamako, Faculté des Sciences et Techniques, Universite des Sciences, Bamako, Mali.<br /><searchLink fieldCode="AU" term="%22Keita+I%22">Keita I</searchLink>; Laboratoire de Biologie Moléculaire Appliquée, des Techniques et des Technologies de Bamako, Faculté des Sciences et Techniques, Universite des Sciences, Bamako, Mali.<br /><searchLink fieldCode="AU" term="%22Doucoure+H%22">Doucoure H</searchLink>; Laboratoire de Biologie Moléculaire Appliquée, des Techniques et des Technologies de Bamako, Faculté des Sciences et Techniques, Universite des Sciences, Bamako, Mali.<br /><searchLink fieldCode="AU" term="%22Nguyen+PD%22">Nguyen PD</searchLink>; Department of Molecular Pathology, Agricultural Genetics Institute, Hanoi, Vietnam.<br /><searchLink fieldCode="AU" term="%22Cao+QL%22">Cao QL</searchLink>; Department of Molecular Pathology, Agricultural Genetics Institute, Hanoi, Vietnam.<br /><searchLink fieldCode="AU" term="%22Sarra+S%22">Sarra S</searchLink>; Centre Régional de Recherche Agronomique de Niono, Institut d'Economie Rural, Bamako, Mali.<br /><searchLink fieldCode="AU" term="%22Dembele+M%22">Dembele M</searchLink>; Centre Régional de Recherche Agronomique de Niono, Institut d'Economie Rural, Bamako, Mali.<br /><searchLink fieldCode="AU" term="%22Tollenaere+C%22">Tollenaere C</searchLink>; Univ Montpellier, IRD, CIRAD, INRAE, Institut Agro, Plant Health Institute of Montpellier, Montpellier, France.<br /><searchLink fieldCode="AU" term="%22Poulin+L%22">Poulin L</searchLink>; Univ Montpellier, IRD, CIRAD, INRAE, Institut Agro, Plant Health Institute of Montpellier, Montpellier, France.<br /><searchLink fieldCode="AU" term="%22Tall+H%22">Tall H</searchLink>; Univ Montpellier, IRD, CIRAD, INRAE, Institut Agro, Plant Health Institute of Montpellier, Montpellier, France.; Institut Sénégalais de Recherches Agricoles, Kolda, Senegal.<br /><searchLink fieldCode="AU" term="%22Blondin+L%22">Blondin L</searchLink>; Univ Montpellier, IRD, CIRAD, INRAE, Institut Agro, Plant Health Institute of Montpellier, Montpellier, France.<br /><searchLink fieldCode="AU" term="%22Verdier+V%22">Verdier V</searchLink>; Univ Montpellier, IRD, CIRAD, INRAE, Institut Agro, Plant Health Institute of Montpellier, Montpellier, France.<br /><searchLink fieldCode="AU" term="%22Koebnik+R%22">Koebnik R</searchLink>; Univ Montpellier, IRD, CIRAD, INRAE, Institut Agro, Plant Health Institute of Montpellier, Montpellier, France.<br /><searchLink fieldCode="AU" term="%22Zougrana+S%22">Zougrana S</searchLink>; INERA, Institut de l'Environnement et de Recherches Agricoles, Bobo-Dioulasso, Burkina Faso.<br /><searchLink fieldCode="AU" term="%22Raveloson+H%22">Raveloson H</searchLink>; Centre Régional de Recherche du FOFIFA/DP SPAD, Antsirabe, Madagascar.; Université de Vakinankaratra, Antsirabe, Madagascar.<br /><searchLink fieldCode="AU" term="%22Gagnevin+L%22">Gagnevin L</searchLink>; Univ Montpellier, IRD, CIRAD, INRAE, Institut Agro, Plant Health Institute of Montpellier, Montpellier, France.<br /><searchLink fieldCode="AU" term="%22Onaga+G%22">Onaga G</searchLink>; National Agricultural Research Organization, Kampala, Uganda.; Africa Rice Center, Bouake, Côte d'Ivoire.<br /><searchLink fieldCode="AU" term="%22Cunnac+S%22">Cunnac S</searchLink>; Univ Montpellier, IRD, CIRAD, INRAE, Institut Agro, Plant Health Institute of Montpellier, Montpellier, France.<br /><searchLink fieldCode="AU" term="%22Vernière+C%22">Vernière C</searchLink>; Univ Montpellier, IRD, CIRAD, INRAE, Institut Agro, Plant Health Institute of Montpellier, Montpellier, France.<br /><searchLink fieldCode="AU" term="%22Wonni+I%22">Wonni I</searchLink>; INERA, Institut de l'Environnement et de Recherches Agricoles, Bobo-Dioulasso, Burkina Faso.<br /><searchLink fieldCode="AU" term="%22Koita+O%22">Koita O</searchLink>; Laboratoire de Biologie Moléculaire Appliquée, des Techniques et des Technologies de Bamako, Faculté des Sciences et Techniques, Universite des Sciences, Bamako, Mali.<br /><searchLink fieldCode="AU" term="%22Szurek+B%22">Szurek B</searchLink>; Univ Montpellier, IRD, CIRAD, INRAE, Institut Agro, Plant Health Institute of Montpellier, Montpellier, France.<br /><searchLink fieldCode="AU" term="%22Bogdanove+A%22">Bogdanove A</searchLink>; Plant Pathology and Plant-Microbe Biology Section, School of Integrative Plant Science, Cornell University, Ithaca, New York, USA.<br /><searchLink fieldCode="AU" term="%22Hutin+M%22">Hutin M</searchLink>; Univ Montpellier, IRD, CIRAD, INRAE, Institut Agro, Plant Health Institute of Montpellier, Montpellier, France.; Plant Pathology and Plant-Microbe Biology Section, School of Integrative Plant Science, Cornell University, Ithaca, New York, USA.
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  Data: <searchLink fieldCode="JN" term="%227605801%22">Applied and environmental microbiology</searchLink> [Appl Environ Microbiol] 2025 Oct 22; Vol. 91 (10), pp. e0112125. <i>Date of Electronic Publication: </i>2025 Sep 08.
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